RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 THSD7BQ9C0I4 1608 aa12.94□□□□□ -0.34
RET-201ENST00000340058 C3orf80F5H4A9 247 aa12.94□□□□□ -0.34
RET-201ENST00000340058 SH2D1BO14796 132 aa12.94□□□□□ -0.34
RET-201ENST00000340058 ALDH3B1P43353 468 aa12.94□□□□□ -0.34
RET-201ENST00000340058 P2RX3P56373 397 aa12.94□□□□□ -0.34
RET-201ENST00000340058 CFHR1Q03591 330 aa12.94□□□□□ -0.34
RET-201ENST00000340058 FBXO17Q96EF6 278 aa12.94□□□□□ -0.34
RET-201ENST00000340058 ERRFI1Q9UJM3 462 aaPredicted RBP12.94□□□□□ -0.34
RET-201ENST00000340058 ONECUT2O95948 504 aa12.93□□□□□ -0.34
RET-201ENST00000340058 TAGLNQ01995 201 aaKnown RBP12.93□□□□□ -0.34
RET-201ENST00000340058 BAXQ07812 192 aa12.93□□□□□ -0.34
RET-201ENST00000340058 PLA1AQ53H76 456 aa12.93□□□□□ -0.34
RET-201ENST00000340058 H3F3CQ6NXT2 135 aa12.93□□□□□ -0.34
RET-201ENST00000340058 SEZ6L2Q6UXD5 910 aa12.93□□□□□ -0.34
RET-201ENST00000340058 FAM185AQ8N0U4 392 aa12.93□□□□□ -0.34
RET-201ENST00000340058 ST8SIA2Q92186 375 aa12.93□□□□□ -0.34
RET-201ENST00000340058 HAS2Q92819 552 aa12.93□□□□□ -0.34
RET-201ENST00000340058 SLC7A10Q9NS82 523 aa12.93□□□□□ -0.34
RET-201ENST00000340058 IGLV1-36A0A0B4J1U3 117 aa12.93□□□□□ -0.34
RET-201ENST00000340058 IGHV3-43A0A0B4J1X8 118 aa12.93□□□□□ -0.34
RET-201ENST00000340058 IGKV1D-43A0A0B4J1Z2 117 aa12.93□□□□□ -0.34
RET-201ENST00000340058 HPP00738 406 aa12.93□□□□□ -0.34
RET-201ENST00000340058 IGHV3-43DP0DP04 118 aa12.93□□□□□ -0.34
RET-201ENST00000340058 AKR1C3P42330 323 aa12.93□□□□□ -0.34
RET-201ENST00000340058 ZBTB37Q5TC79 503 aa12.93□□□□□ -0.34
RET-201ENST00000340058 HPSE2Q8WWQ2 592 aa12.93□□□□□ -0.34
RET-201ENST00000340058 FRZBQ92765 325 aa12.93□□□□□ -0.34
RET-201ENST00000340058 TINAGQ9UJW2 476 aa12.93□□□□□ -0.34
RET-201ENST00000340058 LNP1A1A4G5 178 aa12.93□□□□□ -0.34
RET-201ENST00000340058 GNG3P63215 75 aa12.93□□□□□ -0.34
RET-201ENST00000340058 ZNF816Q0VGE8 651 aaPredicted RBP12.93□□□□□ -0.34
RET-201ENST00000340058 BAP18Q8IXM2 172 aa12.93□□□□□ -0.34
RET-201ENST00000340058 OR2M7Q8NG81 312 aa12.93□□□□□ -0.34
RET-201ENST00000340058 MARC2Q969Z3 335 aa12.93□□□□□ -0.34
RET-201ENST00000340058 ADAT1Q9BUB4 502 aaKnown RBP12.93□□□□□ -0.34
RET-201ENST00000340058 GPR160Q9UJ42 338 aa12.93□□□□□ -0.34
RET-201ENST00000340058 LOC101059948A0A1B0GTJ6 334 aa12.92□□□□□ -0.34
RET-201ENST00000340058 KLF4O43474 513 aa12.92□□□□□ -0.34
RET-201ENST00000340058 AQP8O94778 261 aa12.92□□□□□ -0.34
RET-201ENST00000340058 GSK3AP49840 483 aa12.92□□□□□ -0.34
RET-201ENST00000340058 RAB32Q13637 225 aa12.92□□□□□ -0.34
RET-201ENST00000340058 HAGHQ16775 308 aa12.92□□□□□ -0.34
RET-201ENST00000340058 SLC25A38Q96DW6 304 aa12.92□□□□□ -0.34
RET-201ENST00000340058 SOX7Q9BT81 388 aa12.92□□□□□ -0.34
RET-201ENST00000340058 KLK2P20151 261 aa12.92□□□□□ -0.34
RET-201ENST00000340058 MZT1Q08AG7 82 aa12.92□□□□□ -0.34
RET-201ENST00000340058 SOHLH1Q5JUK2 328 aa12.92□□□□□ -0.34
RET-201ENST00000340058 TMEM123Q8N131 208 aa12.92□□□□□ -0.34
RET-201ENST00000340058 ARRDC1Q8N5I2 433 aa12.92□□□□□ -0.34
RET-201ENST00000340058 ST7LQ8TDW4 575 aa12.92□□□□□ -0.34
RET-201ENST00000340058 ZNF75AQ96N20 296 aa12.92□□□□□ -0.34
RET-201ENST00000340058 NXF2Q9GZY0 626 aaKnown RBP12.92□□□□□ -0.34
RET-201ENST00000340058 RPS10-NUDT3A0A1W2PQS6 291 aa12.92□□□□□ -0.34
RET-201ENST00000340058 RPS10P46783 165 aaKnown RBP12.92□□□□□ -0.34
RET-201ENST00000340058 RAB5BP61020 215 aa12.92□□□□□ -0.34
RET-201ENST00000340058 PEA15Q15121 130 aa12.92□□□□□ -0.34
RET-201ENST00000340058 Q6ZRG5 221 aa12.92□□□□□ -0.34
RET-201ENST00000340058 OR4A16Q8NH70 328 aa12.92□□□□□ -0.34
RET-201ENST00000340058 MAP6Q96JE9 813 aa12.92□□□□□ -0.34
RET-201ENST00000340058 TMEM68Q96MH6 324 aa12.92□□□□□ -0.34
RET-201ENST00000340058 OR5B12Q96R08 314 aa12.92□□□□□ -0.34
RET-201ENST00000340058 CA10Q9NS85 328 aa12.92□□□□□ -0.34
RET-201ENST00000340058 RFPL3SP0C7P2 107 aa12.91□□□□□ -0.34
RET-201ENST00000340058 KLF9Q13886 244 aaPredicted RBP12.91□□□□□ -0.34
RET-201ENST00000340058 PRAMEF5Q5TYX0 476 aa12.91□□□□□ -0.34
RET-201ENST00000340058 PRAMEF6Q5VXH4 476 aa12.91□□□□□ -0.34
RET-201ENST00000340058 C2orf50Q96LR7 162 aa12.91□□□□□ -0.34
RET-201ENST00000340058 OPA3Q9H6K4 179 aa12.91□□□□□ -0.34
RET-201ENST00000340058 WDR54Q9H977 334 aa12.91□□□□□ -0.34
RET-201ENST00000340058 GPR35Q9HC97 309 aa12.91□□□□□ -0.34
RET-201ENST00000340058 ZNF391Q9UJN7 358 aa12.91□□□□□ -0.34
RET-201ENST00000340058 ACACBO00763 2458 aa12.91□□□□□ -0.34
RET-201ENST00000340058 KIAA2026Q5HYC2 2103 aa12.91□□□□□ -0.34
RET-201ENST00000340058 C1orf196B1AJZ1 125 aa12.91□□□□□ -0.34
RET-201ENST00000340058 TGM6O95932 706 aa12.91□□□□□ -0.34
RET-201ENST00000340058 IL5P05113 134 aa12.91□□□□□ -0.34
RET-201ENST00000340058 HPNP05981 417 aa12.91□□□□□ -0.34
RET-201ENST00000340058 F2RL1P55085 397 aa12.91□□□□□ -0.34
RET-201ENST00000340058 OR2F1Q13607 317 aa12.91□□□□□ -0.34
RET-201ENST00000340058 CD200R1LQ6Q8B3 271 aa12.91□□□□□ -0.34
RET-201ENST00000340058 GFRALQ6UXV0 394 aa12.91□□□□□ -0.34
RET-201ENST00000340058 SVBPQ8N300 66 aa12.91□□□□□ -0.34
RET-201ENST00000340058 TMEM100Q9NV29 134 aa12.91□□□□□ -0.34
RET-201ENST00000340058 GHRLQ9UBU3 117 aa12.91□□□□□ -0.34
RET-201ENST00000340058 PURGQ9UJV8 347 aaKnown RBP12.91□□□□□ -0.34
RET-201ENST00000340058 IGHV1-45A0A0A0MS14 117 aa12.91□□□□□ -0.34
RET-201ENST00000340058 A0A1W2PPC1 479 aa12.91□□□□□ -0.34
RET-201ENST00000340058 C9orf170A2RU37 121 aa12.91□□□□□ -0.34
RET-201ENST00000340058 NPIPB9F8W1W9 429 aa12.91□□□□□ -0.34
RET-201ENST00000340058 CDIPTO14735 213 aa12.91□□□□□ -0.34
RET-201ENST00000340058 RAB31Q13636 194 aa12.91□□□□□ -0.34
RET-201ENST00000340058 RAB33BQ9H082 229 aa12.91□□□□□ -0.34
RET-201ENST00000340058 MSL2Q9HCI7 577 aa12.91□□□□□ -0.34
RET-201ENST00000340058 SLC39A9Q9NUM3 307 aa12.91□□□□□ -0.34
RET-201ENST00000340058 SHOXO15266 292 aa12.9□□□□□ -0.34
RET-201ENST00000340058 HOXA1P49639 335 aaPredicted RBP12.9□□□□□ -0.34
RET-201ENST00000340058 IGLV3-21P80748 117 aaPredicted RBP12.9□□□□□ -0.34
RET-201ENST00000340058 ZNF362Q5T0B9 420 aaPredicted RBP12.9□□□□□ -0.34
RET-201ENST00000340058 TMEM251Q8N6I4 163 aa12.9□□□□□ -0.34
RET-201ENST00000340058 GPHA2Q96T91 129 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms