RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 ERVFRD-1P60508 538 aa12.64□□□□□ -0.39
LINC01116-202ENST00000339037 RIPPLY1Q0D2K3 151 aa12.64□□□□□ -0.39
LINC01116-202ENST00000339037 SNAPC1Q16533 368 aa12.64□□□□□ -0.39
LINC01116-202ENST00000339037 PLA1AQ53H76 456 aa12.64□□□□□ -0.39
LINC01116-202ENST00000339037 FAHD1Q6P587 224 aa12.64□□□□□ -0.39
LINC01116-202ENST00000339037 ZNF782Q6ZMW2 699 aaPredicted RBP12.64□□□□□ -0.39
LINC01116-202ENST00000339037 LHFPL4Q7Z7J7 247 aa12.64□□□□□ -0.39
LINC01116-202ENST00000339037 NDUFA11Q86Y39 141 aa12.64□□□□□ -0.39
LINC01116-202ENST00000339037 Q8N2B8 174 aa12.64□□□□□ -0.39
LINC01116-202ENST00000339037 POC1AQ8NBT0 407 aa12.64□□□□□ -0.39
LINC01116-202ENST00000339037 OR4M1Q8NGD0 313 aa12.64□□□□□ -0.39
LINC01116-202ENST00000339037 ITFG2Q969R8 447 aa12.64□□□□□ -0.39
LINC01116-202ENST00000339037 UTP4Q969X6 686 aaKnown RBP12.64□□□□□ -0.39
LINC01116-202ENST00000339037 ZNF488Q96MN9 340 aa12.64□□□□□ -0.39
LINC01116-202ENST00000339037 CDCA4Q9BXL8 241 aa12.64□□□□□ -0.39
LINC01116-202ENST00000339037 CADM1Q9BY67 442 aaKnown RBP12.64□□□□□ -0.39
LINC01116-202ENST00000339037 YIPF3Q9GZM5 350 aa12.64□□□□□ -0.39
LINC01116-202ENST00000339037 MMP28Q9H239 520 aa12.64□□□□□ -0.39
LINC01116-202ENST00000339037 FAM206AQ9NX38 181 aa12.64□□□□□ -0.39
LINC01116-202ENST00000339037 COPS3Q9UNS2 423 aa12.64□□□□□ -0.39
LINC01116-202ENST00000339037 TCF19Q9Y242 345 aa12.64□□□□□ -0.39
LINC01116-202ENST00000339037 FAM90A8PA6NJQ4 464 aa12.63□□□□□ -0.39
LINC01116-202ENST00000339037 ACOD1A6NK06 481 aa12.63□□□□□ -0.39
LINC01116-202ENST00000339037 M0R129 80 aa12.63□□□□□ -0.39
LINC01116-202ENST00000339037 GSC2O15499 205 aa12.63□□□□□ -0.39
LINC01116-202ENST00000339037 PRKYO43930 277 aa12.63□□□□□ -0.39
LINC01116-202ENST00000339037 PEX14O75381 377 aa12.63□□□□□ -0.39
LINC01116-202ENST00000339037 FAHP16930 419 aa12.63□□□□□ -0.39
LINC01116-202ENST00000339037 VAMP1P23763 118 aa12.63□□□□□ -0.39
LINC01116-202ENST00000339037 CEBPDP49716 269 aaPredicted RBP12.63□□□□□ -0.39
LINC01116-202ENST00000339037 ZNF273Q14593 569 aa12.63□□□□□ -0.39
LINC01116-202ENST00000339037 PTGES3Q15185 160 aaKnown RBP12.63□□□□□ -0.39
LINC01116-202ENST00000339037 ZBTB37Q5TC79 503 aa12.63□□□□□ -0.39
LINC01116-202ENST00000339037 KCTD18Q6PI47 426 aaPredicted RBP12.63□□□□□ -0.39
LINC01116-202ENST00000339037 MOB3CQ70IA8 216 aa12.63□□□□□ -0.39
LINC01116-202ENST00000339037 OR2T27Q8NH04 317 aa12.63□□□□□ -0.39
LINC01116-202ENST00000339037 OR51E1Q8TCB6 317 aa12.63□□□□□ -0.39
LINC01116-202ENST00000339037 DNAJC9Q8WXX5 260 aa12.63□□□□□ -0.39
LINC01116-202ENST00000339037 FOXRED1Q96CU9 486 aaPredicted RBP12.63□□□□□ -0.39
LINC01116-202ENST00000339037 NRBF2Q96F24 287 aa12.63□□□□□ -0.39
LINC01116-202ENST00000339037 TEAD3Q99594 435 aa12.63□□□□□ -0.39
LINC01116-202ENST00000339037 CITED2Q99967 270 aaPredicted RBP12.63□□□□□ -0.39
LINC01116-202ENST00000339037 TEX12Q9BXU0 123 aa12.63□□□□□ -0.39
LINC01116-202ENST00000339037 GPR84Q9NQS5 396 aa12.63□□□□□ -0.39
LINC01116-202ENST00000339037 ABCB10Q9NRK6 738 aa12.63□□□□□ -0.39
LINC01116-202ENST00000339037 ENPP5Q9UJA9 477 aa12.63□□□□□ -0.39
LINC01116-202ENST00000339037 PIGLQ9Y2B2 252 aa12.63□□□□□ -0.39
LINC01116-202ENST00000339037 J3QT63 122 aa12.62□□□□□ -0.39
LINC01116-202ENST00000339037 MITFO75030 526 aaPredicted RBP12.62□□□□□ -0.39
LINC01116-202ENST00000339037 NXPH2O95156 264 aa12.62□□□□□ -0.39
LINC01116-202ENST00000339037 PGA5P0DJD9 388 aa12.62□□□□□ -0.39
LINC01116-202ENST00000339037 HAAOP46952 286 aa12.62□□□□□ -0.39
LINC01116-202ENST00000339037 RAB13P51153 203 aa12.62□□□□□ -0.39
LINC01116-202ENST00000339037 CNN3Q15417 329 aaKnown RBP12.62□□□□□ -0.39
LINC01116-202ENST00000339037 ZNF684Q5T5D7 378 aa12.62□□□□□ -0.39
LINC01116-202ENST00000339037 DEGS2Q6QHC5 323 aa12.62□□□□□ -0.39
LINC01116-202ENST00000339037 BCDIN3DQ7Z5W3 292 aaKnown RBP12.62□□□□□ -0.39
LINC01116-202ENST00000339037 TMEM219Q86XT9 240 aa12.62□□□□□ -0.39
LINC01116-202ENST00000339037 ZNF573Q86YE8 665 aa12.62□□□□□ -0.39
LINC01116-202ENST00000339037 DYNAPQ8N1N2 210 aa12.62□□□□□ -0.39
LINC01116-202ENST00000339037 RPS4Y2Q8TD47 263 aa12.62□□□□□ -0.39
LINC01116-202ENST00000339037 PHF21AQ96BD5 680 aa12.62□□□□□ -0.39
LINC01116-202ENST00000339037 MROQ9BYG7 248 aa12.62□□□□□ -0.39
LINC01116-202ENST00000339037 PBOV1Q9GZY1 135 aa12.62□□□□□ -0.39
LINC01116-202ENST00000339037 AURKAIP1Q9NWT8 199 aaPredicted RBP12.62□□□□□ -0.39
LINC01116-202ENST00000339037 PITPNC1Q9UKF7 332 aa12.62□□□□□ -0.39
LINC01116-202ENST00000339037 POLDIP2Q9Y2S7 368 aa12.62□□□□□ -0.39
LINC01116-202ENST00000339037 SYNGR1O43759 233 aa12.61□□□□□ -0.39
LINC01116-202ENST00000339037 NRASP01111 189 aa12.61□□□□□ -0.39
LINC01116-202ENST00000339037 IGLV3-1P01715 115 aa12.61□□□□□ -0.39
LINC01116-202ENST00000339037 TK1P04183 234 aa12.61□□□□□ -0.39
LINC01116-202ENST00000339037 ARG1P05089 322 aa12.61□□□□□ -0.39
LINC01116-202ENST00000339037 PIPP12273 146 aaPredicted RBP12.61□□□□□ -0.39
LINC01116-202ENST00000339037 EPHA2P29317 976 aa12.61□□□□□ -0.39
LINC01116-202ENST00000339037 MFGE8Q08431 387 aaPredicted RBP12.61□□□□□ -0.39
LINC01116-202ENST00000339037 SSX2Q16385 188 aa12.61□□□□□ -0.39
LINC01116-202ENST00000339037 LCN1P1Q5VSP4 162 aa12.61□□□□□ -0.39
LINC01116-202ENST00000339037 CCBE1Q6UXH8 406 aaPredicted RBP12.61□□□□□ -0.39
LINC01116-202ENST00000339037 CALHM1Q8IU99 346 aa12.61□□□□□ -0.39
LINC01116-202ENST00000339037 WIPF2Q8TF74 440 aaPredicted RBP12.61□□□□□ -0.39
LINC01116-202ENST00000339037 OR5M11Q96RB7 305 aa12.61□□□□□ -0.39
LINC01116-202ENST00000339037 OR8B4Q96RC9 309 aa12.61□□□□□ -0.39
LINC01116-202ENST00000339037 NRIP2Q9BQI9 281 aa12.61□□□□□ -0.39
LINC01116-202ENST00000339037 PRSS22Q9GZN4 317 aa12.61□□□□□ -0.39
LINC01116-202ENST00000339037 OR14J1Q9UGF5 321 aa12.61□□□□□ -0.39
LINC01116-202ENST00000339037 TBL2Q9Y4P3 447 aaKnown RBP12.61□□□□□ -0.39
LINC01116-202ENST00000339037 A6NDX4 124 aa12.6□□□□□ -0.39
LINC01116-202ENST00000339037 ADARB2-AS1A8MUL3 147 aa12.6□□□□□ -0.39
LINC01116-202ENST00000339037 C17orf98A8MV24 154 aa12.6□□□□□ -0.39
LINC01116-202ENST00000339037 ODF3BA8MYP8 253 aa12.6□□□□□ -0.39
LINC01116-202ENST00000339037 NOS1APO75052 506 aaPredicted RBP12.6□□□□□ -0.39
LINC01116-202ENST00000339037 DHRS3O75911 302 aa12.6□□□□□ -0.39
LINC01116-202ENST00000339037 ESRRGP62508 458 aa12.6□□□□□ -0.39
LINC01116-202ENST00000339037 ROM1Q03395 351 aa12.6□□□□□ -0.39
LINC01116-202ENST00000339037 BNIP1Q12981 228 aa12.6□□□□□ -0.39
LINC01116-202ENST00000339037 ZNF829Q3KNS6 432 aaPredicted RBP12.6□□□□□ -0.39
LINC01116-202ENST00000339037 ZNF679Q8IYX0 411 aa12.6□□□□□ -0.39
LINC01116-202ENST00000339037 OR13D1Q8NGV5 346 aa12.6□□□□□ -0.39
LINC01116-202ENST00000339037 MALSU1Q96EH3 234 aa12.6□□□□□ -0.39
LINC01116-202ENST00000339037 CNN2Q99439 309 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms