RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 LRRC75AQ8NAA5 344 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 DEFB108BQ8NET1 73 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 SGK3Q96BR1 496 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 TTTY12Q9BZ98 90 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 RTN4RQ9BZR6 473 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 PLEKHA2Q9HB19 425 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 C9orf170A2RU37 121 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 SSX5O60225 188 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 DUS4LO95620 317 aaKnown RBP5.54□□□□□ -1.52
PRKDC-202ENST00000338368 RPL12P30050 165 aaKnown RBP5.54□□□□□ -1.52
PRKDC-202ENST00000338368 C1orf100Q5SVJ3 147 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 TMEM268Q5VZI3 342 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 TMEM217Q8N7C4 229 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 BOD1Q96IK1 185 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 ZC3H10Q96K80 434 aaKnown RBP5.54□□□□□ -1.52
PRKDC-202ENST00000338368 C2orf50Q96LR7 162 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 TAF9BQ9HBM6 251 aa5.54□□□□□ -1.52
PRKDC-202ENST00000338368 FAM212BQ9NTI7 297 aaPredicted RBP5.54□□□□□ -1.52
PRKDC-202ENST00000338368 FIGNL2A6NMB9 653 aa5.53□□□□□ -1.52
PRKDC-202ENST00000338368 TNFSF12O43508 249 aa5.53□□□□□ -1.52
PRKDC-202ENST00000338368 GLRA1P23415 457 aa5.53□□□□□ -1.52
PRKDC-202ENST00000338368 GAS1P54826 345 aa5.53□□□□□ -1.52
PRKDC-202ENST00000338368 RPS23P62266 143 aaKnown RBP5.53□□□□□ -1.52
PRKDC-202ENST00000338368 BTN1A1Q13410 526 aa5.53□□□□□ -1.52
PRKDC-202ENST00000338368 CLINT1Q14677 625 aa5.53□□□□□ -1.52
PRKDC-202ENST00000338368 TECTBQ96PL2 329 aa5.53□□□□□ -1.52
PRKDC-202ENST00000338368 KCNJ16Q9NPI9 418 aa5.53□□□□□ -1.52
PRKDC-202ENST00000338368 A0A1W2PP11 408 aa5.53□□□□□ -1.52
PRKDC-202ENST00000338368 FSTP19883 344 aa5.53□□□□□ -1.52
PRKDC-202ENST00000338368 PIGPP57054 158 aa5.53□□□□□ -1.52
PRKDC-202ENST00000338368 ATPAF1Q5TC12 328 aaPredicted RBP5.53□□□□□ -1.52
PRKDC-202ENST00000338368 BRICD5Q6PL45 260 aa5.53□□□□□ -1.52
PRKDC-202ENST00000338368 C20orf196Q8IYI0 205 aa5.53□□□□□ -1.52
PRKDC-202ENST00000338368 CHAC2Q8WUX2 184 aa5.53□□□□□ -1.52
PRKDC-202ENST00000338368 G6PC2Q9NQR9 355 aa5.53□□□□□ -1.52
PRKDC-202ENST00000338368 NPIPB13A6NJU9 1138 aa5.53□□□□□ -1.52
PRKDC-202ENST00000338368 NPIPB4C9JG80 1138 aa5.53□□□□□ -1.52
PRKDC-202ENST00000338368 TRAF3IP2O43734 574 aaPredicted RBP5.53□□□□□ -1.52
PRKDC-202ENST00000338368 ISG15P05161 165 aa5.53□□□□□ -1.52
PRKDC-202ENST00000338368 ZNF260Q3ZCT1 412 aa5.53□□□□□ -1.52
PRKDC-202ENST00000338368 OR13C8Q8NGS7 320 aa5.53□□□□□ -1.52
PRKDC-202ENST00000338368 TAAR5O14804 337 aa5.53□□□□□ -1.52
PRKDC-202ENST00000338368 LRP3O75074 770 aa5.53□□□□□ -1.52
PRKDC-202ENST00000338368 SULT1A3P0DMM9 295 aa5.53□□□□□ -1.52
PRKDC-202ENST00000338368 SULT1A4P0DMN0 295 aa5.53□□□□□ -1.52
PRKDC-202ENST00000338368 RHEBQ15382 184 aa5.53□□□□□ -1.52
PRKDC-202ENST00000338368 FDX2Q6P4F2 183 aa5.53□□□□□ -1.52
PRKDC-202ENST00000338368 SRCAPQ6ZRS2 3230 aa5.53□□□□□ -1.52
PRKDC-202ENST00000338368 ST8SIA2Q92186 375 aa5.53□□□□□ -1.52
PRKDC-202ENST00000338368 TERTO14746 1132 aaKnown RBP5.53□□□□□ -1.52
PRKDC-202ENST00000338368 MSTNO14793 375 aa5.53□□□□□ -1.52
PRKDC-202ENST00000338368 RAMP1O60894 148 aa5.53□□□□□ -1.52
PRKDC-202ENST00000338368 SP6Q3SY56 376 aa5.53□□□□□ -1.52
PRKDC-202ENST00000338368 KIAA2026Q5HYC2 2103 aa5.53□□□□□ -1.52
PRKDC-202ENST00000338368 IMMP1LQ96LU5 166 aa5.53□□□□□ -1.52
PRKDC-202ENST00000338368 ZNF629Q9UEG4 869 aaPredicted RBP5.53□□□□□ -1.52
PRKDC-202ENST00000338368 SPINT2O43291 252 aa5.53□□□□□ -1.52
PRKDC-202ENST00000338368 LMX1BO60663 402 aa5.53□□□□□ -1.52
PRKDC-202ENST00000338368 NME2P22392 152 aa5.53□□□□□ -1.52
PRKDC-202ENST00000338368 EDDM3AQ14507 147 aa5.53□□□□□ -1.52
PRKDC-202ENST00000338368 FAM213BQ8TBF2 198 aa5.53□□□□□ -1.52
PRKDC-202ENST00000338368 TMED6Q8WW62 240 aa5.53□□□□□ -1.52
PRKDC-202ENST00000338368 RGP1Q92546 391 aaPredicted RBP5.53□□□□□ -1.52
PRKDC-202ENST00000338368 MARC2Q969Z3 335 aa5.53□□□□□ -1.52
PRKDC-202ENST00000338368 RIMS4Q9H426 269 aaPredicted RBP5.53□□□□□ -1.52
PRKDC-202ENST00000338368 NDRG3Q9UGV2 375 aa5.53□□□□□ -1.52
PRKDC-202ENST00000338368 RNF212BA8MTL3 300 aa5.53□□□□□ -1.52
PRKDC-202ENST00000338368 OR11L1Q8NGX0 322 aa5.53□□□□□ -1.52
PRKDC-202ENST00000338368 CORO2AQ92828 525 aa5.53□□□□□ -1.52
PRKDC-202ENST00000338368 GPR27Q9NS67 375 aa5.53□□□□□ -1.52
PRKDC-202ENST00000338368 CHCHD2Q9Y6H1 151 aaPredicted RBP5.53□□□□□ -1.52
PRKDC-202ENST00000338368 CADP27708 2225 aa5.53□□□□□ -1.52
PRKDC-202ENST00000338368 SH2D1BO14796 132 aa5.53□□□□□ -1.52
PRKDC-202ENST00000338368 PSG4Q00888 419 aa5.53□□□□□ -1.52
PRKDC-202ENST00000338368 A0A0G2JK05 382 aa5.53□□□□□ -1.52
PRKDC-202ENST00000338368 KLK10O43240 276 aa5.53□□□□□ -1.52
PRKDC-202ENST00000338368 GPM6AP51674 278 aa5.53□□□□□ -1.52
PRKDC-202ENST00000338368 AGFG1P52594 562 aaKnown RBP5.53□□□□□ -1.52
PRKDC-202ENST00000338368 TMEM211Q6ICI0 200 aa5.53□□□□□ -1.52
PRKDC-202ENST00000338368 C10orf35Q96D05 121 aa5.53□□□□□ -1.52
PRKDC-202ENST00000338368 ACTL6BO94805 426 aa5.53□□□□□ -1.52
PRKDC-202ENST00000338368 HNF1AP20823 631 aa5.53□□□□□ -1.52
PRKDC-202ENST00000338368 IL3RAP26951 378 aa5.53□□□□□ -1.52
PRKDC-202ENST00000338368 WDSUB1Q8N9V3 476 aa5.53□□□□□ -1.52
PRKDC-202ENST00000338368 ZNF107Q9UII5 783 aaPredicted RBP5.53□□□□□ -1.52
PRKDC-202ENST00000338368 PLXND1Q9Y4D7 1925 aa5.52□□□□□ -1.53
PRKDC-202ENST00000338368 SOX8P57073 446 aa5.52□□□□□ -1.53
PRKDC-202ENST00000338368 PPP1R32Q7Z5V6 425 aa5.52□□□□□ -1.53
PRKDC-202ENST00000338368 KCNRGQ8N5I3 272 aa5.52□□□□□ -1.53
PRKDC-202ENST00000338368 SLC30A7Q8NEW0 376 aa5.52□□□□□ -1.53
PRKDC-202ENST00000338368 OR4D10Q8NGI6 311 aa5.52□□□□□ -1.53
PRKDC-202ENST00000338368 PTX4Q96A99 478 aa5.52□□□□□ -1.53
PRKDC-202ENST00000338368 FAM206AQ9NX38 181 aa5.52□□□□□ -1.53
PRKDC-202ENST00000338368 J3QRE1 110 aa5.52□□□□□ -1.53
PRKDC-202ENST00000338368 RGS13O14921 159 aa5.52□□□□□ -1.53
PRKDC-202ENST00000338368 TGIF1Q15583 401 aa5.52□□□□□ -1.53
PRKDC-202ENST00000338368 TIMD4Q96H15 378 aa5.52□□□□□ -1.53
PRKDC-202ENST00000338368 PIGMQ9H3S5 423 aa5.52□□□□□ -1.53
PRKDC-202ENST00000338368 RAB18Q9NP72 206 aa5.52□□□□□ -1.53
PRKDC-202ENST00000338368 LYZL6O75951 148 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms