RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 TNFAIP8L1Q8WVP5 186 aa9.98□□□□□ -0.81
SPTLC1-202ENST00000337841 COX4I2Q96KJ9 171 aa9.98□□□□□ -0.81
SPTLC1-202ENST00000337841 NRIP2Q9BQI9 281 aa9.98□□□□□ -0.81
SPTLC1-202ENST00000337841 MRPS26Q9BYN8 205 aaKnown RBP9.98□□□□□ -0.81
SPTLC1-202ENST00000337841 ZNF665Q9H7R5 613 aa9.98□□□□□ -0.81
SPTLC1-202ENST00000337841 PATZ1Q9HBE1 687 aaKnown RBP9.98□□□□□ -0.81
SPTLC1-202ENST00000337841 RHOFQ9HBH0 211 aa9.98□□□□□ -0.81
SPTLC1-202ENST00000337841 EXOSC4Q9NPD3 245 aaKnown RBP9.98□□□□□ -0.81
SPTLC1-202ENST00000337841 MTCH1Q9NZJ7 389 aa9.98□□□□□ -0.81
SPTLC1-202ENST00000337841 STUB1Q9UNE7 303 aa9.98□□□□□ -0.81
SPTLC1-202ENST00000337841 ING4Q9UNL4 249 aa9.98□□□□□ -0.81
SPTLC1-202ENST00000337841 IGHV3OR15-7A0A075B7D8 119 aa9.97□□□□□ -0.81
SPTLC1-202ENST00000337841 A0A096LNT2 108 aa9.97□□□□□ -0.81
SPTLC1-202ENST00000337841 SPRY1O43609 319 aaPredicted RBP9.97□□□□□ -0.81
SPTLC1-202ENST00000337841 GYPAP02724 150 aa9.97□□□□□ -0.81
SPTLC1-202ENST00000337841 WNT2P09544 360 aa9.97□□□□□ -0.81
SPTLC1-202ENST00000337841 CALRP27797 417 aaKnown RBP9.97□□□□□ -0.81
SPTLC1-202ENST00000337841 PTGFRP43088 359 aa9.97□□□□□ -0.81
SPTLC1-202ENST00000337841 BMXP51813 675 aa9.97□□□□□ -0.81
SPTLC1-202ENST00000337841 ERVK11-1P61568 191 aa9.97□□□□□ -0.81
SPTLC1-202ENST00000337841 SMIM21Q3B7S5 101 aa9.97□□□□□ -0.81
SPTLC1-202ENST00000337841 FAM27D1Q5T7N8 215 aa9.97□□□□□ -0.81
SPTLC1-202ENST00000337841 ATPAF1Q5TC12 328 aaPredicted RBP9.97□□□□□ -0.81
SPTLC1-202ENST00000337841 CYB5R2Q6BCY4 276 aa9.97□□□□□ -0.81
SPTLC1-202ENST00000337841 FIP1L1Q6UN15 594 aaKnown RBP9.97□□□□□ -0.81
SPTLC1-202ENST00000337841 ACP7Q6ZNF0 438 aa9.97□□□□□ -0.81
SPTLC1-202ENST00000337841 SLC36A1Q7Z2H8 476 aa9.97□□□□□ -0.81
SPTLC1-202ENST00000337841 JAGN1Q8N5M9 183 aa9.97□□□□□ -0.81
SPTLC1-202ENST00000337841 NKAIN3Q8N8D7 197 aa9.97□□□□□ -0.81
SPTLC1-202ENST00000337841 PXT1Q8NFP0 134 aa9.97□□□□□ -0.81
SPTLC1-202ENST00000337841 OR5T2Q8NGG2 359 aa9.97□□□□□ -0.81
SPTLC1-202ENST00000337841 OR5D18Q8NGL1 313 aa9.97□□□□□ -0.81
SPTLC1-202ENST00000337841 SLAMF9Q96A28 289 aa9.97□□□□□ -0.81
SPTLC1-202ENST00000337841 NEIL1Q96FI4 390 aaPredicted RBP9.97□□□□□ -0.81
SPTLC1-202ENST00000337841 MED30Q96HR3 178 aa9.97□□□□□ -0.81
SPTLC1-202ENST00000337841 ZNF488Q96MN9 340 aa9.97□□□□□ -0.81
SPTLC1-202ENST00000337841 WDR13Q9H1Z4 485 aa9.97□□□□□ -0.81
SPTLC1-202ENST00000337841 ELL3Q9HB65 397 aaPredicted RBP9.97□□□□□ -0.81
SPTLC1-202ENST00000337841 NLKQ9UBE8 527 aa9.97□□□□□ -0.81
SPTLC1-202ENST00000337841 GLS2Q9UI32 602 aa9.97□□□□□ -0.81
SPTLC1-202ENST00000337841 TRAV1-2A0A0B4J238 106 aa9.96□□□□□ -0.82
SPTLC1-202ENST00000337841 OR2AT4A6NND4 320 aa9.96□□□□□ -0.82
SPTLC1-202ENST00000337841 CEACAM18A8MTB9 384 aa9.96□□□□□ -0.82
SPTLC1-202ENST00000337841 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.96□□□□□ -0.82
SPTLC1-202ENST00000337841 PDCD5O14737 125 aa9.96□□□□□ -0.82
SPTLC1-202ENST00000337841 TNFRSF13BO14836 293 aaPredicted RBP9.96□□□□□ -0.82
SPTLC1-202ENST00000337841 ADAM20O43506 726 aa9.96□□□□□ -0.82
SPTLC1-202ENST00000337841 ANGPTL7O43827 346 aa9.96□□□□□ -0.82
SPTLC1-202ENST00000337841 IGHV2-5P01817 119 aa9.96□□□□□ -0.82
SPTLC1-202ENST00000337841 RPS2P15880 293 aaKnown RBP9.96□□□□□ -0.82
SPTLC1-202ENST00000337841 MYL9P24844 172 aa9.96□□□□□ -0.82
SPTLC1-202ENST00000337841 FGF9P31371 208 aaPredicted RBP9.96□□□□□ -0.82
SPTLC1-202ENST00000337841 GABRA2P47869 451 aa9.96□□□□□ -0.82
SPTLC1-202ENST00000337841 ZP1P60852 638 aa9.96□□□□□ -0.82
SPTLC1-202ENST00000337841 GPR176Q14439 515 aa9.96□□□□□ -0.82
SPTLC1-202ENST00000337841 RSU1Q15404 277 aa9.96□□□□□ -0.82
SPTLC1-202ENST00000337841 TMEM249Q2WGJ8 235 aa9.96□□□□□ -0.82
SPTLC1-202ENST00000337841 TIMM50Q3ZCQ8 353 aa9.96□□□□□ -0.82
SPTLC1-202ENST00000337841 ASCL4Q6XD76 172 aa9.96□□□□□ -0.82
SPTLC1-202ENST00000337841 GDPGP1Q6ZNW5 385 aa9.96□□□□□ -0.82
SPTLC1-202ENST00000337841 LRRTM1Q86UE6 522 aa9.96□□□□□ -0.82
SPTLC1-202ENST00000337841 FAM58AQ8N1B3 248 aa9.96□□□□□ -0.82
SPTLC1-202ENST00000337841 LINC01356Q8N9X3 169 aa9.96□□□□□ -0.82
SPTLC1-202ENST00000337841 OR8B3Q8NGG8 313 aa9.96□□□□□ -0.82
SPTLC1-202ENST00000337841 EMG1Q92979 244 aaKnown RBP9.96□□□□□ -0.82
SPTLC1-202ENST00000337841 OR8B2Q96RD0 313 aa9.96□□□□□ -0.82
SPTLC1-202ENST00000337841 UQCC2Q9BRT2 126 aa9.96□□□□□ -0.82
SPTLC1-202ENST00000337841 FAM192AQ9GZU8 254 aa9.96□□□□□ -0.82
SPTLC1-202ENST00000337841 DNTTIP1Q9H147 329 aa9.96□□□□□ -0.82
SPTLC1-202ENST00000337841 METTL9Q9H1A3 318 aa9.96□□□□□ -0.82
SPTLC1-202ENST00000337841 PPIL3Q9H2H8 161 aaKnown RBP9.96□□□□□ -0.82
SPTLC1-202ENST00000337841 SMURF1Q9HCE7 757 aa9.96□□□□□ -0.82
SPTLC1-202ENST00000337841 MYO9AB2RTY4 2548 aa9.95□□□□□ -0.82
SPTLC1-202ENST00000337841 NKX6-3A6NJ46 265 aa9.95□□□□□ -0.82
SPTLC1-202ENST00000337841 B4DSR2 109 aa9.95□□□□□ -0.82
SPTLC1-202ENST00000337841 NDUFB3O43676 98 aa9.95□□□□□ -0.82
SPTLC1-202ENST00000337841 ZNF780AO75290 641 aaPredicted RBP9.95□□□□□ -0.82
SPTLC1-202ENST00000337841 FOXH1O75593 365 aa9.95□□□□□ -0.82
SPTLC1-202ENST00000337841 KDM4BO94953 1096 aa9.95□□□□□ -0.82
SPTLC1-202ENST00000337841 KNG1P01042 644 aa9.95□□□□□ -0.82
SPTLC1-202ENST00000337841 CSTBP04080 98 aaKnown RBP9.95□□□□□ -0.82
SPTLC1-202ENST00000337841 SMIM18P0DKX4 95 aa9.95□□□□□ -0.82
SPTLC1-202ENST00000337841 PSG2P11465 335 aa9.95□□□□□ -0.82
SPTLC1-202ENST00000337841 BCL3P20749 454 aa9.95□□□□□ -0.82
SPTLC1-202ENST00000337841 PRDX2P32119 198 aa9.95□□□□□ -0.82
SPTLC1-202ENST00000337841 NPBWR2P48146 333 aa9.95□□□□□ -0.82
SPTLC1-202ENST00000337841 MTNR1BP49286 362 aa9.95□□□□□ -0.82
SPTLC1-202ENST00000337841 NPY4RP50391 375 aa9.95□□□□□ -0.82
SPTLC1-202ENST00000337841 HOXA4Q00056 320 aaPredicted RBP9.95□□□□□ -0.82
SPTLC1-202ENST00000337841 ESCO2Q56NI9 601 aa9.95□□□□□ -0.82
SPTLC1-202ENST00000337841 C22orf42Q6IC83 251 aa9.95□□□□□ -0.82
SPTLC1-202ENST00000337841 LYPD2Q6UXB3 125 aa9.95□□□□□ -0.82
SPTLC1-202ENST00000337841 RNF144BQ7Z419 303 aa9.95□□□□□ -0.82
SPTLC1-202ENST00000337841 BIVMQ86UB2 503 aa9.95□□□□□ -0.82
SPTLC1-202ENST00000337841 KCTD12Q96CX2 325 aaKnown RBP9.95□□□□□ -0.82
SPTLC1-202ENST00000337841 SEH1LQ96EE3 360 aa9.95□□□□□ -0.82
SPTLC1-202ENST00000337841 C1orf159Q96HA4 380 aa9.95□□□□□ -0.82
SPTLC1-202ENST00000337841 CCL13Q99616 98 aa9.95□□□□□ -0.82
SPTLC1-202ENST00000337841 CHCHD6Q9BRQ6 235 aa9.95□□□□□ -0.82
SPTLC1-202ENST00000337841 OR51E2Q9H255 320 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms