RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 TMPRSS12Q86WS5 348 aa7.61□□□□□ -1.19
TDP1-201ENST00000335725 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.61□□□□□ -1.19
TDP1-201ENST00000335725 SARAFQ96BY9 339 aa7.61□□□□□ -1.19
TDP1-201ENST00000335725 HARBI1Q96MB7 349 aa7.61□□□□□ -1.19
TDP1-201ENST00000335725 GFI1Q99684 422 aa7.61□□□□□ -1.19
TDP1-201ENST00000335725 SDF2L1Q9HCN8 221 aa7.61□□□□□ -1.19
TDP1-201ENST00000335725 ANKRD10Q9NXR5 420 aa7.61□□□□□ -1.19
TDP1-201ENST00000335725 LOC285556D6RIA3 1793 aa7.6□□□□□ -1.19
TDP1-201ENST00000335725 ROBO1Q9Y6N7 1651 aa7.6□□□□□ -1.19
TDP1-201ENST00000335725 A0A1B0GV50 99 aa7.6□□□□□ -1.19
TDP1-201ENST00000335725 A4D1N5 150 aa7.6□□□□□ -1.19
TDP1-201ENST00000335725 K7N7A8 449 aa7.6□□□□□ -1.19
TDP1-201ENST00000335725 CNIH1O95406 144 aa7.6□□□□□ -1.19
TDP1-201ENST00000335725 GDF5P43026 501 aa7.6□□□□□ -1.19
TDP1-201ENST00000335725 TMEM128Q5BJH2 165 aa7.6□□□□□ -1.19
TDP1-201ENST00000335725 SPIN3Q5JUX0 258 aa7.6□□□□□ -1.19
TDP1-201ENST00000335725 PHYHD1Q5SRE7 291 aa7.6□□□□□ -1.19
TDP1-201ENST00000335725 FAM219AQ8IW50 185 aa7.6□□□□□ -1.19
TDP1-201ENST00000335725 OR2AE1Q8NHA4 323 aa7.6□□□□□ -1.19
TDP1-201ENST00000335725 C2orf15Q8WU43 125 aaKnown RBP7.6□□□□□ -1.19
TDP1-201ENST00000335725 SAMD10Q9BYL1 202 aa7.6□□□□□ -1.19
TDP1-201ENST00000335725 SMIM3Q9BZL3 60 aa7.6□□□□□ -1.19
TDP1-201ENST00000335725 RNF39Q9H2S5 420 aa7.6□□□□□ -1.19
TDP1-201ENST00000335725 PARLQ9H300 379 aa7.6□□□□□ -1.19
TDP1-201ENST00000335725 SLC13A4Q9UKG4 626 aa7.6□□□□□ -1.19
TDP1-201ENST00000335725 MYLKQ15746 1914 aa7.6□□□□□ -1.19
TDP1-201ENST00000335725 COL14A1Q05707 1796 aaKnown RBP7.6□□□□□ -1.19
TDP1-201ENST00000335725 SLC17A3O00476 420 aa7.6□□□□□ -1.19
TDP1-201ENST00000335725 TAX1BP3O14907 124 aa7.6□□□□□ -1.19
TDP1-201ENST00000335725 GPR137BO60478 399 aa7.6□□□□□ -1.19
TDP1-201ENST00000335725 NPIPB7O75200 414 aa7.6□□□□□ -1.19
TDP1-201ENST00000335725 HRASP01112 189 aa7.6□□□□□ -1.19
TDP1-201ENST00000335725 C1QTNF9P0C862 333 aa7.6□□□□□ -1.19
TDP1-201ENST00000335725 PNMTP11086 282 aa7.6□□□□□ -1.19
TDP1-201ENST00000335725 THBS3P49746 956 aa7.6□□□□□ -1.19
TDP1-201ENST00000335725 ATP5IP56385 69 aaPredicted RBP7.6□□□□□ -1.19
TDP1-201ENST00000335725 RPS11P62280 158 aaKnown RBP eCLIP7.6□□□□□ -1.19
TDP1-201ENST00000335725 LCN2P80188 198 aa7.6□□□□□ -1.19
TDP1-201ENST00000335725 DCST2Q5T1A1 773 aa7.6□□□□□ -1.19
TDP1-201ENST00000335725 PTCRAQ6ISU1 281 aaPredicted RBP7.6□□□□□ -1.19
TDP1-201ENST00000335725 MUC15Q8N387 334 aa7.6□□□□□ -1.19
TDP1-201ENST00000335725 OR2T10Q8NGZ9 312 aa7.6□□□□□ -1.19
TDP1-201ENST00000335725 WBP2Q969T9 261 aa7.6□□□□□ -1.19
TDP1-201ENST00000335725 TMEM45BQ96B21 275 aa7.6□□□□□ -1.19
TDP1-201ENST00000335725 VCX2Q9H322 139 aa7.6□□□□□ -1.19
TDP1-201ENST00000335725 PATZ1Q9HBE1 687 aaKnown RBP7.6□□□□□ -1.19
TDP1-201ENST00000335725 M0R1X1 148 aa7.6□□□□□ -1.19
TDP1-201ENST00000335725 MT-ATP6P00846 226 aa7.6□□□□□ -1.19
TDP1-201ENST00000335725 F3P13726 295 aa7.6□□□□□ -1.19
TDP1-201ENST00000335725 SRP14P37108 136 aaKnown RBP7.6□□□□□ -1.19
TDP1-201ENST00000335725 ZNF85Q03923 595 aa7.6□□□□□ -1.19
TDP1-201ENST00000335725 HSD52Q0P140 79 aa7.6□□□□□ -1.19
TDP1-201ENST00000335725 STAC2Q6ZMT1 411 aa7.6□□□□□ -1.19
TDP1-201ENST00000335725 OR51G1Q8NGK1 321 aa7.6□□□□□ -1.19
TDP1-201ENST00000335725 OR5AR1Q8NGP9 310 aa7.6□□□□□ -1.19
TDP1-201ENST00000335725 RNF133Q8WVZ7 376 aa7.6□□□□□ -1.19
TDP1-201ENST00000335725 RAX2Q96IS3 184 aa7.6□□□□□ -1.19
TDP1-201ENST00000335725 RSG1Q9BU20 258 aa7.6□□□□□ -1.19
TDP1-201ENST00000335725 SS18L2Q9UHA2 77 aa7.6□□□□□ -1.19
TDP1-201ENST00000335725 ZNF207O43670 478 aaKnown RBP7.59□□□□□ -1.19
TDP1-201ENST00000335725 ADORA2BP29275 332 aa7.59□□□□□ -1.19
TDP1-201ENST00000335725 SSTR5P35346 364 aa7.59□□□□□ -1.19
TDP1-201ENST00000335725 PBX2P40425 430 aa7.59□□□□□ -1.19
TDP1-201ENST00000335725 APOBEC1P41238 236 aaKnown RBP7.59□□□□□ -1.19
TDP1-201ENST00000335725 PITX1P78337 314 aaPredicted RBP7.59□□□□□ -1.19
TDP1-201ENST00000335725 MSMO1Q15800 293 aa7.59□□□□□ -1.19
TDP1-201ENST00000335725 POC1AQ8NBT0 407 aa7.59□□□□□ -1.19
TDP1-201ENST00000335725 OR6N2Q8NGY6 317 aa7.59□□□□□ -1.19
TDP1-201ENST00000335725 LINC00470Q9BZP3 86 aa7.59□□□□□ -1.19
TDP1-201ENST00000335725 LPAR5Q9H1C0 372 aa7.59□□□□□ -1.19
TDP1-201ENST00000335725 DEFB129Q9H1M3 183 aa7.59□□□□□ -1.19
TDP1-201ENST00000335725 OSER1Q9NX31 292 aa7.59□□□□□ -1.19
TDP1-201ENST00000335725 JPT1Q9UK76 154 aa7.59□□□□□ -1.19
TDP1-201ENST00000335725 NUP214P35658 2090 aaPredicted RBP7.59□□□□□ -1.19
TDP1-201ENST00000335725 HLA-HP01893 362 aa7.59□□□□□ -1.19
TDP1-201ENST00000335725 MAS1P04201 325 aa7.59□□□□□ -1.19
TDP1-201ENST00000335725 GPR12P47775 334 aa7.59□□□□□ -1.19
TDP1-201ENST00000335725 ARF3P61204 181 aaPredicted RBP7.59□□□□□ -1.19
TDP1-201ENST00000335725 CD300EQ496F6 205 aaPredicted RBP7.59□□□□□ -1.19
TDP1-201ENST00000335725 WBP2NLQ6ICG8 309 aa7.59□□□□□ -1.19
TDP1-201ENST00000335725 DEFB125Q8N687 156 aa7.59□□□□□ -1.19
TDP1-201ENST00000335725 LIN37Q96GY3 246 aaPredicted RBP7.59□□□□□ -1.19
TDP1-201ENST00000335725 SLC7A10Q9NS82 523 aa7.59□□□□□ -1.19
TDP1-201ENST00000335725 TMED7Q9Y3B3 224 aa7.59□□□□□ -1.19
TDP1-201ENST00000335725 H3BNC9 293 aa7.58□□□□□ -1.2
TDP1-201ENST00000335725 PIN1P1O15428 100 aa7.58□□□□□ -1.2
TDP1-201ENST00000335725 B4GALT2O60909 372 aa7.58□□□□□ -1.2
TDP1-201ENST00000335725 BRI3O95415 125 aa7.58□□□□□ -1.2
TDP1-201ENST00000335725 SFT2D2O95562 160 aa7.58□□□□□ -1.2
TDP1-201ENST00000335725 MC4RP32245 332 aa7.58□□□□□ -1.2
TDP1-201ENST00000335725 PSG9Q00887 426 aa7.58□□□□□ -1.2
TDP1-201ENST00000335725 ADIGQ0VDE8 80 aa7.58□□□□□ -1.2
TDP1-201ENST00000335725 ADIRFQ15847 76 aa7.58□□□□□ -1.2
TDP1-201ENST00000335725 C12orf54Q6X4T0 127 aa7.58□□□□□ -1.2
TDP1-201ENST00000335725 NEGR1Q7Z3B1 354 aa7.58□□□□□ -1.2
TDP1-201ENST00000335725 SIGLECL1Q8N7X8 197 aa7.58□□□□□ -1.2
TDP1-201ENST00000335725 SPSB4Q96A44 273 aa7.58□□□□□ -1.2
TDP1-201ENST00000335725 ANAPC16Q96DE5 110 aa7.58□□□□□ -1.2
TDP1-201ENST00000335725 AP1S3Q96PC3 154 aa7.58□□□□□ -1.2
TDP1-201ENST00000335725 PHF7Q9BWX1 381 aaPredicted RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms