RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 FAM90A2PQ658T7 463 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 CTAGE6Q86UF2 777 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 PALM2Q8IXS6 379 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 C10orf126Q8N4M7 172 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 PACRGLQ8N7B6 248 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 TMEM104Q8NE00 496 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 OR7G3Q8NG95 312 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 ZNF420Q8TAQ5 688 aaPredicted RBP1.1□□□□□ -2.23
LINC00643-201ENST00000334389 GHSRQ92847 366 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 SLC25A36Q96CQ1 311 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 RNF125Q96EQ8 232 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 LINGO1Q96FE5 620 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 SLC25A44Q96H78 314 aaPredicted RBP1.1□□□□□ -2.23
LINC00643-201ENST00000334389 TXNDC15Q96J42 360 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 SNX22Q96L94 193 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 TMEM120AQ9BXJ8 343 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 PARD6BQ9BYG5 372 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 YTHDF1Q9BYJ9 559 aaKnown RBP1.1□□□□□ -2.23
LINC00643-201ENST00000334389 ELOVL6Q9H5J4 265 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 MANSC1Q9H8J5 431 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 BPIFA1Q9NP55 256 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 ACP6Q9NPH0 428 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 SDR39U1Q9NRG7 319 aaPredicted RBP1.1□□□□□ -2.23
LINC00643-201ENST00000334389 GLTPQ9NZD2 209 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 NINJ2Q9NZG7 142 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 KLRF1Q9NZS2 232 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 TMEM216Q9P0N5 145 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 TAAR3PQ9P1P4 343 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 ABCD2Q9UBJ2 740 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 CLN8Q9UBY8 286 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 PSORS1C2Q9UIG4 136 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 PLLPQ9Y342 182 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 RAP2CQ9Y3L5 183 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 ADAM18Q9Y3Q7 739 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 CEPT1Q9Y6K0 416 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 TGP01266 2768 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 DMDP11532 3685 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 A0A087WUU8 490 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 A0A1W2PPI3 338 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 LINC00862A6NCI5 91 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 F5H423 210 aaPredicted RBP1.1□□□□□ -2.23
LINC00643-201ENST00000334389 H3BMM0 161 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 H3BNX3 289 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 UPK1AO00322 258 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 AURKAO14965 403 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 ANGPT2O15123 496 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 GATCO43716 136 aaKnown RBP1.1□□□□□ -2.23
LINC00643-201ENST00000334389 CXCL13O43927 109 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 MPZL2O60487 215 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 OR6A2O95222 327 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 FARS2O95363 451 aaKnown RBP1.1□□□□□ -2.23
LINC00643-201ENST00000334389 ATP6V1G2O95670 118 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 IGHV4-59P01825 116 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 SERPINE1P05121 402 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 C2P06681 752 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 CHRM2P08172 466 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 PF4V1P10720 104 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 PCGF2P35227 344 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 SOX6P35712 828 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 SLC15A1P46059 708 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 HSPA13P48723 471 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 MARCKSL1P49006 195 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 ZNF84P51523 738 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 SLC7A2P52569 658 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 CDKN2DP55273 166 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 RPS20P60866 119 aaKnown RBP1.1□□□□□ -2.23
LINC00643-201ENST00000334389 PSME3P61289 254 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 LRMPQ12912 555 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 TSTA3Q13630 321 aaPredicted RBP1.1□□□□□ -2.23
LINC00643-201ENST00000334389 GTF2H2Q13888 395 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 OR4D1Q15615 310 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 CEACAM21Q3KPI0 293 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 C14orf177Q52M58 125 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 UNC50Q53HI1 259 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 RAB6CQ53S08 254 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 YIF1BQ5BJH7 314 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 PTRHD1Q6GMV3 140 aaKnown RBP1.1□□□□□ -2.23
LINC00643-201ENST00000334389 REEP3Q6NUK4 255 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 GTF2H2CQ6P1K8 395 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 MZT2AQ6P582 158 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 ZNF705AQ6ZN79 300 aaPredicted RBP1.1□□□□□ -2.23
LINC00643-201ENST00000334389 DET1Q7L5Y6 550 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 GSTA5Q7RTV2 222 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 AAED1Q7RTV5 226 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 GTSCR1Q86UQ5 136 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 GATSQ8NAP1 163 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 CSNK1G2-AS1Q8NCQ2 148 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 PPFIBP2Q8ND30 876 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 OR4K15Q8NH41 348 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 LHFPL5Q8TAF8 219 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 SLC26A7Q8TE54 656 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 XAGE5Q8WWM1 108 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 MAGOHBQ96A72 148 aaKnown RBP1.1□□□□□ -2.23
LINC00643-201ENST00000334389 ST6GAL2Q96JF0 529 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 RNF170Q96K19 258 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 NEDD4LQ96PU5 975 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 GPHA2Q96T91 129 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 ALG8Q9BVK2 526 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 SPATA5L1Q9BVQ7 753 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 OR2H1Q9GZK4 316 aa1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms