RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 MBPP02686 304 aaPredicted RBP12.07□□□□□ -0.48
SYNE3-201ENST00000334258 IGHV4-34P06331 123 aa12.07□□□□□ -0.48
SYNE3-201ENST00000334258 GABRR1P24046 479 aa12.07□□□□□ -0.48
SYNE3-201ENST00000334258 FXYD4P59646 89 aa12.07□□□□□ -0.48
SYNE3-201ENST00000334258 OR8G1Q15617 311 aa12.07□□□□□ -0.48
SYNE3-201ENST00000334258 NSDHLQ15738 373 aa12.07□□□□□ -0.48
SYNE3-201ENST00000334258 ZNF239Q16600 458 aaKnown RBP12.07□□□□□ -0.48
SYNE3-201ENST00000334258 HEPN1Q6WQI6 88 aa12.07□□□□□ -0.48
SYNE3-201ENST00000334258 TMEM156Q8N614 296 aa12.07□□□□□ -0.48
SYNE3-201ENST00000334258 ADIPOR1Q96A54 375 aa12.07□□□□□ -0.48
SYNE3-201ENST00000334258 MALSU1Q96EH3 234 aa12.07□□□□□ -0.48
SYNE3-201ENST00000334258 WFDC1Q9HC57 220 aa12.07□□□□□ -0.48
SYNE3-201ENST00000334258 PCNX3Q9H6A9 2034 aa12.07□□□□□ -0.48
SYNE3-201ENST00000334258 RAMP1O60894 148 aa12.06□□□□□ -0.48
SYNE3-201ENST00000334258 NHLH2Q02577 135 aa12.06□□□□□ -0.48
SYNE3-201ENST00000334258 ZNF343Q6P1L6 599 aa12.06□□□□□ -0.48
SYNE3-201ENST00000334258 C1QL2Q7Z5L3 287 aa12.06□□□□□ -0.48
SYNE3-201ENST00000334258 TSTD1Q8NFU3 115 aa12.06□□□□□ -0.48
SYNE3-201ENST00000334258 POC1BQ8TC44 478 aa12.06□□□□□ -0.48
SYNE3-201ENST00000334258 KCNK17Q96T54 332 aa12.06□□□□□ -0.48
SYNE3-201ENST00000334258 PLEKHJ1Q9NW61 149 aa12.06□□□□□ -0.48
SYNE3-201ENST00000334258 MMP17Q9ULZ9 603 aa12.06□□□□□ -0.48
SYNE3-201ENST00000334258 B3GALT1Q9Y5Z6 326 aa12.06□□□□□ -0.48
SYNE3-201ENST00000334258 HPNP05981 417 aa12.06□□□□□ -0.48
SYNE3-201ENST00000334258 SNRPCP09234 159 aaKnown RBP12.06□□□□□ -0.48
SYNE3-201ENST00000334258 TMEM11P17152 192 aa12.06□□□□□ -0.48
SYNE3-201ENST00000334258 DDTP30046 118 aa12.06□□□□□ -0.48
SYNE3-201ENST00000334258 PIGPP57054 158 aa12.06□□□□□ -0.48
SYNE3-201ENST00000334258 RSU1Q15404 277 aa12.06□□□□□ -0.48
SYNE3-201ENST00000334258 TSPO2Q5TGU0 170 aa12.06□□□□□ -0.48
SYNE3-201ENST00000334258 C6orf201Q7Z4U5 140 aa12.06□□□□□ -0.48
SYNE3-201ENST00000334258 ZNF610Q8N9Z0 462 aa12.06□□□□□ -0.48
SYNE3-201ENST00000334258 OR8B12Q8NGG6 310 aa12.06□□□□□ -0.48
SYNE3-201ENST00000334258 OR10S1Q8NGN2 331 aa12.06□□□□□ -0.48
SYNE3-201ENST00000334258 GPBAR1Q8TDU6 330 aa12.06□□□□□ -0.48
SYNE3-201ENST00000334258 C1orf147Q96MC9 270 aaPredicted RBP12.06□□□□□ -0.48
SYNE3-201ENST00000334258 MRPL37Q9BZE1 423 aaKnown RBP12.06□□□□□ -0.48
SYNE3-201ENST00000334258 COPS7AQ9UBW8 275 aa12.06□□□□□ -0.48
SYNE3-201ENST00000334258 EP300Q09472 2414 aaPredicted RBP12.06□□□□□ -0.48
SYNE3-201ENST00000334258 ZNF850A8MQ14 1090 aa12.06□□□□□ -0.48
SYNE3-201ENST00000334258 PPP1R2P9O14990 202 aa12.06□□□□□ -0.48
SYNE3-201ENST00000334258 TMEM225BP0DP42 221 aa12.06□□□□□ -0.48
SYNE3-201ENST00000334258 RABIFP47224 123 aa12.06□□□□□ -0.48
SYNE3-201ENST00000334258 P2RY1P47900 373 aa12.06□□□□□ -0.48
SYNE3-201ENST00000334258 HAGHQ16775 308 aa12.06□□□□□ -0.48
SYNE3-201ENST00000334258 OGFOD3Q6PK18 319 aa12.06□□□□□ -0.48
SYNE3-201ENST00000334258 THAP3Q8WTV1 239 aaPredicted RBP12.06□□□□□ -0.48
SYNE3-201ENST00000334258 TMEM234Q8WY98 164 aa12.06□□□□□ -0.48
SYNE3-201ENST00000334258 TCTN2Q96GX1 697 aa12.06□□□□□ -0.48
SYNE3-201ENST00000334258 HDHD3Q9BSH5 251 aaPredicted RBP12.06□□□□□ -0.48
SYNE3-201ENST00000334258 TWSG1Q9GZX9 223 aa12.06□□□□□ -0.48
SYNE3-201ENST00000334258 PARPBPQ9NWS1 579 aa12.06□□□□□ -0.48
SYNE3-201ENST00000334258 HDGFL3Q9Y3E1 203 aa12.06□□□□□ -0.48
SYNE3-201ENST00000334258 STRAPQ9Y3F4 350 aaKnown RBP12.06□□□□□ -0.48
SYNE3-201ENST00000334258 IGKV1D-8A0A087WSZ0 117 aa12.05□□□□□ -0.48
SYNE3-201ENST00000334258 RER1O15258 196 aa12.05□□□□□ -0.48
SYNE3-201ENST00000334258 GABRA4P48169 554 aa12.05□□□□□ -0.48
SYNE3-201ENST00000334258 CLRN1P58418 232 aa12.05□□□□□ -0.48
SYNE3-201ENST00000334258 NKX6-1P78426 367 aaPredicted RBP12.05□□□□□ -0.48
SYNE3-201ENST00000334258 HSD11B2P80365 405 aa12.05□□□□□ -0.48
SYNE3-201ENST00000334258 PCK2Q16822 640 aa12.05□□□□□ -0.48
SYNE3-201ENST00000334258 PHLDA2Q53GA4 152 aa12.05□□□□□ -0.48
SYNE3-201ENST00000334258 FBXW12Q6X9E4 464 aa12.05□□□□□ -0.48
SYNE3-201ENST00000334258 CHST5Q9GZS9 411 aa12.05□□□□□ -0.48
SYNE3-201ENST00000334258 SUSD2Q9UGT4 822 aa12.05□□□□□ -0.48
SYNE3-201ENST00000334258 MMACHCQ9Y4U1 282 aa12.05□□□□□ -0.48
SYNE3-201ENST00000334258 DHRS7CA6NNS2 312 aa12.05□□□□□ -0.48
SYNE3-201ENST00000334258 SHISA8B8ZZ34 492 aa12.05□□□□□ -0.48
SYNE3-201ENST00000334258 IGHMP01871 453 aa12.05□□□□□ -0.48
SYNE3-201ENST00000334258 OMGP23515 440 aa12.05□□□□□ -0.48
SYNE3-201ENST00000334258 SURF2Q15527 256 aaPredicted RBP12.05□□□□□ -0.48
SYNE3-201ENST00000334258 KISS1Q15726 138 aa12.05□□□□□ -0.48
SYNE3-201ENST00000334258 C16orf47Q6ZP98 133 aaPredicted RBP12.05□□□□□ -0.48
SYNE3-201ENST00000334258 OR14K1Q8NGZ2 314 aa12.05□□□□□ -0.48
SYNE3-201ENST00000334258 OR10J5Q8NHC4 309 aa12.05□□□□□ -0.48
SYNE3-201ENST00000334258 SCRT1Q9BWW7 348 aa12.05□□□□□ -0.48
SYNE3-201ENST00000334258 PECRQ9BY49 303 aa12.05□□□□□ -0.48
SYNE3-201ENST00000334258 GPR61Q9BZJ8 451 aa12.05□□□□□ -0.48
SYNE3-201ENST00000334258 ZNF319Q9P2F9 582 aa12.05□□□□□ -0.48
SYNE3-201ENST00000334258 ANAPC10Q9UM13 185 aa12.05□□□□□ -0.48
SYNE3-201ENST00000334258 MED12Q93074 2177 aa12.05□□□□□ -0.48
SYNE3-201ENST00000334258 IFITM10A6NMD0 228 aa12.05□□□□□ -0.48
SYNE3-201ENST00000334258 MARCH11A6NNE9 402 aa12.05□□□□□ -0.48
SYNE3-201ENST00000334258 CDRT15L2A8MXV6 281 aa12.05□□□□□ -0.48
SYNE3-201ENST00000334258 H3BQ15 152 aa12.05□□□□□ -0.48
SYNE3-201ENST00000334258 MASP2O00187 686 aa12.05□□□□□ -0.48
SYNE3-201ENST00000334258 OR5H8P0DN80 308 aa12.05□□□□□ -0.48
SYNE3-201ENST00000334258 TCEAL6Q6IPX3 200 aa12.05□□□□□ -0.48
SYNE3-201ENST00000334258 LYZL2Q7Z4W2 148 aa12.05□□□□□ -0.48
SYNE3-201ENST00000334258 C9orf40Q8IXQ3 194 aa12.05□□□□□ -0.48
SYNE3-201ENST00000334258 APCDD1LQ8NCL9 501 aa12.05□□□□□ -0.48
SYNE3-201ENST00000334258 ZNF721Q8TF20 911 aa12.05□□□□□ -0.48
SYNE3-201ENST00000334258 OIT3Q8WWZ8 545 aa12.05□□□□□ -0.48
SYNE3-201ENST00000334258 LIN37Q96GY3 246 aaPredicted RBP12.05□□□□□ -0.48
SYNE3-201ENST00000334258 PRDM13Q9H4Q3 707 aa12.05□□□□□ -0.48
SYNE3-201ENST00000334258 TUBD1Q9UJT1 453 aa12.05□□□□□ -0.48
SYNE3-201ENST00000334258 NXT1Q9UKK6 140 aaKnown RBP12.05□□□□□ -0.48
SYNE3-201ENST00000334258 CYB5BO43169 146 aa12.04□□□□□ -0.48
SYNE3-201ENST00000334258 GPR137BO60478 399 aa12.04□□□□□ -0.48
SYNE3-201ENST00000334258 DDAH2O95865 285 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms