RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 MPGP29372 298 aa13.8□□□□□ -0.2
PDGFB-201ENST00000331163 DLX5P56178 289 aa13.8□□□□□ -0.2
PDGFB-201ENST00000331163 LTC4SQ16873 150 aa13.8□□□□□ -0.2
PDGFB-201ENST00000331163 CA5BP1Q8WTZ4 195 aa13.8□□□□□ -0.2
PDGFB-201ENST00000331163 NUDCD2Q8WVJ2 157 aa13.8□□□□□ -0.2
PDGFB-201ENST00000331163 ZNF488Q96MN9 340 aa13.8□□□□□ -0.2
PDGFB-201ENST00000331163 ZNF75AQ96N20 296 aa13.8□□□□□ -0.2
PDGFB-201ENST00000331163 CHST6Q9GZX3 395 aa13.8□□□□□ -0.2
PDGFB-201ENST00000331163 ABRACLQ9P1F3 81 aa13.8□□□□□ -0.2
PDGFB-201ENST00000331163 ZNF230Q9UIE0 474 aaPredicted RBP13.8□□□□□ -0.2
PDGFB-201ENST00000331163 RAB12Q6IQ22 244 aa13.8□□□□□ -0.2
PDGFB-201ENST00000331163 ZNF546Q86UE3 836 aa13.8□□□□□ -0.2
PDGFB-201ENST00000331163 GMPPAQ96IJ6 420 aaPredicted RBP13.8□□□□□ -0.2
PDGFB-201ENST00000331163 CNTD2Q9H8S5 307 aa13.8□□□□□ -0.2
PDGFB-201ENST00000331163 A0A1B0GUH1 482 aa13.79□□□□□ -0.2
PDGFB-201ENST00000331163 PRAF2O60831 178 aa13.79□□□□□ -0.2
PDGFB-201ENST00000331163 VSIG10L2P0DP72 767 aa13.79□□□□□ -0.2
PDGFB-201ENST00000331163 BAMBIQ13145 260 aa13.79□□□□□ -0.2
PDGFB-201ENST00000331163 UBE2NLQ5JXB2 153 aa13.79□□□□□ -0.2
PDGFB-201ENST00000331163 UNQ6126/PRO20091Q6UXV3 157 aa13.79□□□□□ -0.2
PDGFB-201ENST00000331163 OR51S1Q8NGJ8 323 aa13.79□□□□□ -0.2
PDGFB-201ENST00000331163 PLPPR2Q96GM1 343 aa13.79□□□□□ -0.2
PDGFB-201ENST00000331163 WNT5BQ9H1J7 359 aa13.79□□□□□ -0.2
PDGFB-201ENST00000331163 E9PLN8 166 aa13.79□□□□□ -0.2
PDGFB-201ENST00000331163 DNASE2O00115 360 aaPredicted RBP13.79□□□□□ -0.2
PDGFB-201ENST00000331163 PGAM2P15259 253 aa13.79□□□□□ -0.2
PDGFB-201ENST00000331163 ZNF44P15621 663 aa13.79□□□□□ -0.2
PDGFB-201ENST00000331163 DYRK1AQ13627 763 aa13.79□□□□□ -0.2
PDGFB-201ENST00000331163 RAB35Q15286 201 aa13.79□□□□□ -0.2
PDGFB-201ENST00000331163 CDNFQ49AH0 187 aa13.79□□□□□ -0.2
PDGFB-201ENST00000331163 ACSF3Q4G176 576 aaPredicted RBP13.79□□□□□ -0.2
PDGFB-201ENST00000331163 MUC20Q8N307 709 aaPredicted RBP13.79□□□□□ -0.2
PDGFB-201ENST00000331163 OR5T2Q8NGG2 359 aa13.79□□□□□ -0.2
PDGFB-201ENST00000331163 ADGRG7Q96K78 797 aa13.79□□□□□ -0.2
PDGFB-201ENST00000331163 ZNF275Q9NSD4 429 aaPredicted RBP13.79□□□□□ -0.2
PDGFB-201ENST00000331163 GLS2Q9UI32 602 aa13.79□□□□□ -0.2
PDGFB-201ENST00000331163 HS3ST1O14792 307 aa13.78□□□□□ -0.2
PDGFB-201ENST00000331163 RBBP9O75884 186 aa13.78□□□□□ -0.2
PDGFB-201ENST00000331163 CRYAAP02489 173 aa13.78□□□□□ -0.2
PDGFB-201ENST00000331163 GNB3P16520 340 aa13.78□□□□□ -0.2
PDGFB-201ENST00000331163 BLVRBP30043 206 aaPredicted RBP13.78□□□□□ -0.2
PDGFB-201ENST00000331163 CBX5P45973 191 aa13.78□□□□□ -0.2
PDGFB-201ENST00000331163 ZNF660Q6AZW8 331 aaPredicted RBP13.78□□□□□ -0.2
PDGFB-201ENST00000331163 ZCCHC24Q8N2G6 241 aaKnown RBP13.78□□□□□ -0.2
PDGFB-201ENST00000331163 OR4D6Q8NGJ1 314 aa13.78□□□□□ -0.2
PDGFB-201ENST00000331163 UQCC2Q9BRT2 126 aa13.78□□□□□ -0.2
PDGFB-201ENST00000331163 OR6C6A6NF89 314 aa13.78□□□□□ -0.2
PDGFB-201ENST00000331163 A8MXK9 166 aa13.78□□□□□ -0.2
PDGFB-201ENST00000331163 M0QYG6 137 aa13.78□□□□□ -0.2
PDGFB-201ENST00000331163 SPRY3O43610 288 aa13.78□□□□□ -0.2
PDGFB-201ENST00000331163 CDC14BO60729 498 aa13.78□□□□□ -0.2
PDGFB-201ENST00000331163 CAPZA1P52907 286 aa13.78□□□□□ -0.2
PDGFB-201ENST00000331163 DOK3Q7L591 496 aa13.78□□□□□ -0.2
PDGFB-201ENST00000331163 OVCH2Q7RTZ1 564 aa13.78□□□□□ -0.2
PDGFB-201ENST00000331163 CDH26Q8IXH8 852 aa13.78□□□□□ -0.2
PDGFB-201ENST00000331163 RDH5Q92781 318 aa13.78□□□□□ -0.2
PDGFB-201ENST00000331163 SGK3Q96BR1 496 aa13.78□□□□□ -0.2
PDGFB-201ENST00000331163 ZCCHC4Q9H5U6 513 aa13.78□□□□□ -0.2
PDGFB-201ENST00000331163 PLEKHJ1Q9NW61 149 aa13.78□□□□□ -0.2
PDGFB-201ENST00000331163 RD3LP0DJH9 198 aa13.78□□□□□ -0.2
PDGFB-201ENST00000331163 IGHV1-2P23083 117 aa13.78□□□□□ -0.2
PDGFB-201ENST00000331163 OPRM1P35372 400 aa13.78□□□□□ -0.2
PDGFB-201ENST00000331163 HOXA4Q00056 320 aaPredicted RBP13.78□□□□□ -0.2
PDGFB-201ENST00000331163 SWI5Q1ZZU3 235 aa13.78□□□□□ -0.2
PDGFB-201ENST00000331163 ZNF684Q5T5D7 378 aa13.78□□□□□ -0.2
PDGFB-201ENST00000331163 Q6ZS92 163 aa13.78□□□□□ -0.2
PDGFB-201ENST00000331163 PAQR4Q8N4S7 273 aaPredicted RBP13.78□□□□□ -0.2
PDGFB-201ENST00000331163 OR51F2Q8NH61 342 aa13.78□□□□□ -0.2
PDGFB-201ENST00000331163 SLC6A7Q99884 636 aa13.78□□□□□ -0.2
PDGFB-201ENST00000331163 CMSS1Q9BQ75 279 aaKnown RBP13.78□□□□□ -0.2
PDGFB-201ENST00000331163 TREM1Q9NP99 234 aa13.78□□□□□ -0.2
PDGFB-201ENST00000331163 OR5V1Q9UGF6 321 aa13.78□□□□□ -0.2
PDGFB-201ENST00000331163 OPN4Q9UHM6 478 aa13.78□□□□□ -0.2
PDGFB-201ENST00000331163 A0A1B0GW55 424 aa13.77□□□□□ -0.2
PDGFB-201ENST00000331163 GLSO94925 669 aaPredicted RBP13.77□□□□□ -0.2
PDGFB-201ENST00000331163 DUX4L2P0CJ85 424 aa13.77□□□□□ -0.2
PDGFB-201ENST00000331163 DUX4L3P0CJ86 424 aa13.77□□□□□ -0.2
PDGFB-201ENST00000331163 DUX4L4P0CJ87 422 aa13.77□□□□□ -0.2
PDGFB-201ENST00000331163 DUX4L5P0CJ88 424 aa13.77□□□□□ -0.2
PDGFB-201ENST00000331163 DUX4L6P0CJ89 424 aa13.77□□□□□ -0.2
PDGFB-201ENST00000331163 DUX4L7P0CJ90 424 aa13.77□□□□□ -0.2
PDGFB-201ENST00000331163 RPS11P62280 158 aaKnown RBP eCLIP13.77□□□□□ -0.2
PDGFB-201ENST00000331163 PCK2Q16822 640 aa13.77□□□□□ -0.2
PDGFB-201ENST00000331163 ADAM5Q6NVV9 412 aa13.77□□□□□ -0.2
PDGFB-201ENST00000331163 WBP1Q96G27 269 aa13.77□□□□□ -0.2
PDGFB-201ENST00000331163 C7orf50Q9BRJ6 194 aaKnown RBP13.77□□□□□ -0.2
PDGFB-201ENST00000331163 TMEM59Q9BXS4 323 aa13.77□□□□□ -0.2
PDGFB-201ENST00000331163 FAM117AQ9C073 453 aa13.77□□□□□ -0.2
PDGFB-201ENST00000331163 ZDHHC11Q9H8X9 412 aa13.77□□□□□ -0.2
PDGFB-201ENST00000331163 DUX4Q9UBX2 424 aa13.77□□□□□ -0.2
PDGFB-201ENST00000331163 ZNF503-AS2A6NEH8 195 aa13.77□□□□□ -0.21
PDGFB-201ENST00000331163 ZNF705EA8MWA4 302 aaPredicted RBP13.77□□□□□ -0.21
PDGFB-201ENST00000331163 J3QRE1 110 aa13.77□□□□□ -0.21
PDGFB-201ENST00000331163 SC5DO75845 299 aa13.77□□□□□ -0.21
PDGFB-201ENST00000331163 OR3A2P47893 321 aa13.77□□□□□ -0.21
PDGFB-201ENST00000331163 LSM6P62312 80 aaKnown RBP13.77□□□□□ -0.21
PDGFB-201ENST00000331163 BDH1Q02338 343 aa13.77□□□□□ -0.21
PDGFB-201ENST00000331163 HACD4Q5VWC8 232 aa13.77□□□□□ -0.21
PDGFB-201ENST00000331163 C17orf78Q8N4C9 275 aa13.77□□□□□ -0.21
PDGFB-201ENST00000331163 OR6S1Q8NH40 331 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms