RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 APCDD1LQ8NCL9 501 aa15.88■□□□□ 0.13
CLSTN3-202ENST00000331148 OR10S1Q8NGN2 331 aa15.88■□□□□ 0.13
CLSTN3-202ENST00000331148 ADAMTS18Q8TE60 1221 aa15.88■□□□□ 0.13
CLSTN3-202ENST00000331148 SOX7Q9BT81 388 aa15.88■□□□□ 0.13
CLSTN3-202ENST00000331148 CACNA1IQ9P0X4 2223 aa15.88■□□□□ 0.13
CLSTN3-202ENST00000331148 RBFOX3A6NFN3 312 aa15.88■□□□□ 0.13
CLSTN3-202ENST00000331148 FRG2CA6NGY1 282 aa15.88■□□□□ 0.13
CLSTN3-202ENST00000331148 LILRA5A6NI73 299 aa15.88■□□□□ 0.13
CLSTN3-202ENST00000331148 HSD17B6O14756 317 aa15.88■□□□□ 0.13
CLSTN3-202ENST00000331148 AHSA1O95433 338 aa15.88■□□□□ 0.13
CLSTN3-202ENST00000331148 ECI1P42126 302 aa15.88■□□□□ 0.13
CLSTN3-202ENST00000331148 HSD17B7P56937 341 aa15.88■□□□□ 0.13
CLSTN3-202ENST00000331148 GPR157Q5UAW9 335 aa15.88■□□□□ 0.13
CLSTN3-202ENST00000331148 COMMD2Q86X83 199 aa15.88■□□□□ 0.13
CLSTN3-202ENST00000331148 OR51T1Q8NGJ9 327 aa15.88■□□□□ 0.13
CLSTN3-202ENST00000331148 ZNF2Q9BSG1 426 aaPredicted RBP15.88■□□□□ 0.13
CLSTN3-202ENST00000331148 UNKLQ9H9P5 680 aaKnown RBP15.88■□□□□ 0.13
CLSTN3-202ENST00000331148 NPIPA5E9PKD4 350 aa15.87■□□□□ 0.13
CLSTN3-202ENST00000331148 H0YL77 283 aa15.87■□□□□ 0.13
CLSTN3-202ENST00000331148 DIRAS3O95661 229 aa15.87■□□□□ 0.13
CLSTN3-202ENST00000331148 KLK2P20151 261 aa15.87■□□□□ 0.13
CLSTN3-202ENST00000331148 CCL20P78556 96 aa15.87■□□□□ 0.13
CLSTN3-202ENST00000331148 FAM89BQ8N5H3 189 aa15.87■□□□□ 0.13
CLSTN3-202ENST00000331148 SNIP1Q8TAD8 396 aaKnown RBP15.87■□□□□ 0.13
CLSTN3-202ENST00000331148 PTPMT1Q8WUK0 201 aaPredicted RBP15.87■□□□□ 0.13
CLSTN3-202ENST00000331148 C11orf40Q8WZ69 217 aa15.87■□□□□ 0.13
CLSTN3-202ENST00000331148 KCNK17Q96T54 332 aa15.87■□□□□ 0.13
CLSTN3-202ENST00000331148 GPER1Q99527 375 aa15.87■□□□□ 0.13
CLSTN3-202ENST00000331148 C2orf88Q9BSF0 95 aa15.87■□□□□ 0.13
CLSTN3-202ENST00000331148 NPIPA1Q9UND3 350 aa15.87■□□□□ 0.13
CLSTN3-202ENST00000331148 FOXI3A8MTJ6 420 aaPredicted RBP15.87■□□□□ 0.13
CLSTN3-202ENST00000331148 ZNF878C9JN71 531 aa15.87■□□□□ 0.13
CLSTN3-202ENST00000331148 CYB5BO43169 146 aa15.87■□□□□ 0.13
CLSTN3-202ENST00000331148 PTBP3O95758 552 aaKnown RBP15.87■□□□□ 0.13
CLSTN3-202ENST00000331148 TRGC2P03986 189 aa15.87■□□□□ 0.13
CLSTN3-202ENST00000331148 FABP4P15090 132 aa15.87■□□□□ 0.13
CLSTN3-202ENST00000331148 CAPZBP47756 277 aa15.87■□□□□ 0.13
CLSTN3-202ENST00000331148 SPCS3P61009 180 aa15.87■□□□□ 0.13
CLSTN3-202ENST00000331148 HIST2H3PS2Q5TEC6 136 aa15.87■□□□□ 0.13
CLSTN3-202ENST00000331148 ZNF248Q8NDW4 579 aa15.87■□□□□ 0.13
CLSTN3-202ENST00000331148 OR13D1Q8NGV5 346 aa15.87■□□□□ 0.13
CLSTN3-202ENST00000331148 SLC46A1Q96NT5 459 aa15.87■□□□□ 0.13
CLSTN3-202ENST00000331148 GAL3ST4Q96RP7 486 aa15.87■□□□□ 0.13
CLSTN3-202ENST00000331148 IGKV1D-8A0A087WSZ0 117 aa15.86■□□□□ 0.13
CLSTN3-202ENST00000331148 PAX1P15863 534 aa15.86■□□□□ 0.13
CLSTN3-202ENST00000331148 IL12BP29460 328 aa15.86■□□□□ 0.13
CLSTN3-202ENST00000331148 GALNSP34059 522 aa15.86■□□□□ 0.13
CLSTN3-202ENST00000331148 DLK1P80370 383 aa15.86■□□□□ 0.13
CLSTN3-202ENST00000331148 HAGHQ16775 308 aa15.86■□□□□ 0.13
CLSTN3-202ENST00000331148 ABHD12BQ7Z5M8 362 aaPredicted RBP15.86■□□□□ 0.13
CLSTN3-202ENST00000331148 PECRQ9BY49 303 aa15.86■□□□□ 0.13
CLSTN3-202ENST00000331148 OR8D2Q9GZM6 311 aa15.86■□□□□ 0.13
CLSTN3-202ENST00000331148 PNO1Q9NRX1 252 aaKnown RBP15.86■□□□□ 0.13
CLSTN3-202ENST00000331148 ZNF701Q9NV72 531 aaPredicted RBP15.86■□□□□ 0.13
CLSTN3-202ENST00000331148 RCL1Q9Y2P8 373 aaKnown RBP15.86■□□□□ 0.13
CLSTN3-202ENST00000331148 KCNIP3Q9Y2W7 256 aa15.86■□□□□ 0.13
CLSTN3-202ENST00000331148 PPM1FP49593 454 aaPredicted RBP15.85■□□□□ 0.13
CLSTN3-202ENST00000331148 CEBPGP53567 150 aa15.85■□□□□ 0.13
CLSTN3-202ENST00000331148 LYSMD4Q5XG99 296 aa15.85■□□□□ 0.13
CLSTN3-202ENST00000331148 OR2T2Q6IF00 324 aa15.85■□□□□ 0.13
CLSTN3-202ENST00000331148 WDR5BQ86VZ2 330 aa15.85■□□□□ 0.13
CLSTN3-202ENST00000331148 OR10AD1Q8NGE0 317 aa15.85■□□□□ 0.13
CLSTN3-202ENST00000331148 MMABQ96EY8 250 aaPredicted RBP15.85■□□□□ 0.13
CLSTN3-202ENST00000331148 SIRT7Q9NRC8 400 aa15.85■□□□□ 0.13
CLSTN3-202ENST00000331148 ARID1AO14497 2285 aa15.85■□□□□ 0.13
CLSTN3-202ENST00000331148 CDC14CA4D256 554 aa15.85■□□□□ 0.13
CLSTN3-202ENST00000331148 FTCDNL1E5RQL4 147 aa15.85■□□□□ 0.13
CLSTN3-202ENST00000331148 MS4A18H0YCH9 400 aa15.85■□□□□ 0.13
CLSTN3-202ENST00000331148 SRP19P09132 144 aaKnown RBP15.85■□□□□ 0.13
CLSTN3-202ENST00000331148 BLVRBP30043 206 aaPredicted RBP15.85■□□□□ 0.13
CLSTN3-202ENST00000331148 DAP3P51398 398 aaKnown RBP15.85■□□□□ 0.13
CLSTN3-202ENST00000331148 NHLH2Q02577 135 aa15.85■□□□□ 0.13
CLSTN3-202ENST00000331148 MS4A18Q3C1V0 323 aa15.85■□□□□ 0.13
CLSTN3-202ENST00000331148 BEND4Q6ZU67 534 aa15.85■□□□□ 0.13
CLSTN3-202ENST00000331148 TBL1XR1Q9BZK7 514 aa15.85■□□□□ 0.13
CLSTN3-202ENST00000331148 PADI1Q9ULC6 663 aa15.85■□□□□ 0.13
CLSTN3-202ENST00000331148 SDK1Q7Z5N4 2213 aa15.85■□□□□ 0.13
CLSTN3-202ENST00000331148 NSG1A0A0A6YYJ2 146 aa15.84■□□□□ 0.13
CLSTN3-202ENST00000331148 ALG1L2C9J202 215 aa15.84■□□□□ 0.13
CLSTN3-202ENST00000331148 LAMTOR5O43504 91 aa15.84■□□□□ 0.13
CLSTN3-202ENST00000331148 RND3P61587 244 aa15.84■□□□□ 0.13
CLSTN3-202ENST00000331148 LBHQ53QV2 105 aaPredicted RBP15.84■□□□□ 0.13
CLSTN3-202ENST00000331148 SPSB3Q6PJ21 355 aa15.84■□□□□ 0.13
CLSTN3-202ENST00000331148 SLC25A45Q8N413 288 aa15.84■□□□□ 0.13
CLSTN3-202ENST00000331148 M1APQ8TC57 530 aa15.84■□□□□ 0.13
CLSTN3-202ENST00000331148 STT3BQ8TCJ2 826 aa15.84■□□□□ 0.13
CLSTN3-202ENST00000331148 ADIPOR1Q96A54 375 aa15.84■□□□□ 0.13
CLSTN3-202ENST00000331148 MISP3Q96FF7 219 aa15.84■□□□□ 0.13
CLSTN3-202ENST00000331148 FAM71F1Q96KD3 344 aaPredicted RBP15.84■□□□□ 0.13
CLSTN3-202ENST00000331148 LURAP1Q96LR2 239 aa15.84■□□□□ 0.13
CLSTN3-202ENST00000331148 SMOC1Q9H4F8 434 aa15.84■□□□□ 0.13
CLSTN3-202ENST00000331148 MOB1AQ9H8S9 216 aa15.84■□□□□ 0.13
CLSTN3-202ENST00000331148 MED29Q9NX70 200 aa15.84■□□□□ 0.13
CLSTN3-202ENST00000331148 RRP8O43159 456 aaKnown RBP15.84■□□□□ 0.13
CLSTN3-202ENST00000331148 GRINAQ7Z429 371 aa15.84■□□□□ 0.13
CLSTN3-202ENST00000331148 ZNF429Q86V71 674 aa15.84■□□□□ 0.13
CLSTN3-202ENST00000331148 OR5R1Q8NH85 324 aa15.84■□□□□ 0.13
CLSTN3-202ENST00000331148 GPR84Q9NQS5 396 aa15.84■□□□□ 0.13
CLSTN3-202ENST00000331148 A0A1W2PQD3 144 aa15.83■□□□□ 0.13
CLSTN3-202ENST00000331148 DHRS7CA6NNS2 312 aa15.83■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms