RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 OGFOD3Q6PK18 319 aa12.65□□□□□ -0.39
SNX20-202ENST00000330943 ZNF574Q6ZN55 896 aaPredicted RBP12.65□□□□□ -0.39
SNX20-202ENST00000330943 ZNF441Q8N8Z8 693 aa12.65□□□□□ -0.39
SNX20-202ENST00000330943 PIGTQ969N2 578 aa12.65□□□□□ -0.39
SNX20-202ENST00000330943 SLAMF9Q96A28 289 aa12.65□□□□□ -0.39
SNX20-202ENST00000330943 MUCL1Q96DR8 90 aa12.65□□□□□ -0.39
SNX20-202ENST00000330943 PGAM5Q96HS1 289 aa12.65□□□□□ -0.39
SNX20-202ENST00000330943 CHST5Q9GZS9 411 aa12.65□□□□□ -0.39
SNX20-202ENST00000330943 ALKBH4Q9NXW9 302 aa12.65□□□□□ -0.39
SNX20-202ENST00000330943 GAR1Q9NY12 217 aaKnown RBP12.65□□□□□ -0.39
SNX20-202ENST00000330943 RFNGQ9Y644 331 aa12.65□□□□□ -0.39
SNX20-202ENST00000330943 ADAMTS9Q9P2N4 1935 aa12.64□□□□□ -0.39
SNX20-202ENST00000330943 IGHV3-20A0A0C4DH32 117 aa12.64□□□□□ -0.39
SNX20-202ENST00000330943 TLCD2A6NGC4 264 aa12.64□□□□□ -0.39
SNX20-202ENST00000330943 H7C1Q1 480 aa12.64□□□□□ -0.39
SNX20-202ENST00000330943 FAHP16930 419 aa12.64□□□□□ -0.39
SNX20-202ENST00000330943 CCL1P22362 96 aa12.64□□□□□ -0.39
SNX20-202ENST00000330943 FXYD4P59646 89 aa12.64□□□□□ -0.39
SNX20-202ENST00000330943 ABCA11PQ4W5N1 156 aa12.64□□□□□ -0.39
SNX20-202ENST00000330943 C1orf189Q5VU69 101 aa12.64□□□□□ -0.39
SNX20-202ENST00000330943 ZNF343Q6P1L6 599 aa12.64□□□□□ -0.39
SNX20-202ENST00000330943 UEVLDQ8IX04 471 aa12.64□□□□□ -0.39
SNX20-202ENST00000330943 OR52M1Q8NGK5 317 aa12.64□□□□□ -0.39
SNX20-202ENST00000330943 URGCP-MRPS24S4R325 110 aa12.64□□□□□ -0.39
SNX20-202ENST00000330943 NCOR1O75376 2440 aa12.64□□□□□ -0.39
SNX20-202ENST00000330943 NSG1A0A0A6YYJ2 146 aa12.64□□□□□ -0.39
SNX20-202ENST00000330943 IGHG1P01857 330 aa12.64□□□□□ -0.39
SNX20-202ENST00000330943 PGA4P0DJD7 388 aa12.64□□□□□ -0.39
SNX20-202ENST00000330943 PGA3P0DJD8 388 aa12.64□□□□□ -0.39
SNX20-202ENST00000330943 LMO1P25800 156 aa12.64□□□□□ -0.39
SNX20-202ENST00000330943 RRADP55042 308 aa12.64□□□□□ -0.39
SNX20-202ENST00000330943 TMEM187Q14656 261 aa12.64□□□□□ -0.39
SNX20-202ENST00000330943 PHLDA2Q53GA4 152 aa12.64□□□□□ -0.39
SNX20-202ENST00000330943 GPR157Q5UAW9 335 aa12.64□□□□□ -0.39
SNX20-202ENST00000330943 CDCP2Q5VXM1 449 aa12.64□□□□□ -0.39
SNX20-202ENST00000330943 FBXW12Q6X9E4 464 aa12.64□□□□□ -0.39
SNX20-202ENST00000330943 SLC38A9Q8NBW4 561 aa12.64□□□□□ -0.39
SNX20-202ENST00000330943 LFNGQ8NES3 379 aa12.64□□□□□ -0.39
SNX20-202ENST00000330943 RTN4IP1Q8WWV3 396 aaPredicted RBP12.64□□□□□ -0.39
SNX20-202ENST00000330943 PNRC2Q9NPJ4 139 aaKnown RBP12.64□□□□□ -0.39
SNX20-202ENST00000330943 ANXA10Q9UJ72 324 aa12.64□□□□□ -0.39
SNX20-202ENST00000330943 MED12Q93074 2177 aa12.64□□□□□ -0.39
SNX20-202ENST00000330943 ZNF850A8MQ14 1090 aa12.63□□□□□ -0.39
SNX20-202ENST00000330943 K7N7A8 449 aa12.63□□□□□ -0.39
SNX20-202ENST00000330943 RRP8O43159 456 aaKnown RBP12.63□□□□□ -0.39
SNX20-202ENST00000330943 ZNF43P17038 809 aa12.63□□□□□ -0.39
SNX20-202ENST00000330943 FBLP22087 321 aaKnown RBP12.63□□□□□ -0.39
SNX20-202ENST00000330943 OPRM1P35372 400 aa12.63□□□□□ -0.39
SNX20-202ENST00000330943 CCL20P78556 96 aa12.63□□□□□ -0.39
SNX20-202ENST00000330943 MYBPHQ13203 477 aa12.63□□□□□ -0.39
SNX20-202ENST00000330943 UBE2V2Q15819 145 aa12.63□□□□□ -0.39
SNX20-202ENST00000330943 APCDD1LQ8NCL9 501 aa12.63□□□□□ -0.39
SNX20-202ENST00000330943 STT3BQ8TCJ2 826 aa12.63□□□□□ -0.39
SNX20-202ENST00000330943 RHOVQ96L33 236 aa12.63□□□□□ -0.39
SNX20-202ENST00000330943 VN1R1Q9GZP7 353 aa12.63□□□□□ -0.39
SNX20-202ENST00000330943 OPA3Q9H6K4 179 aa12.63□□□□□ -0.39
SNX20-202ENST00000330943 NAA60Q9H7X0 242 aa12.63□□□□□ -0.39
SNX20-202ENST00000330943 NXT1Q9UKK6 140 aaKnown RBP12.63□□□□□ -0.39
SNX20-202ENST00000330943 CYP8B1Q9UNU6 501 aa12.63□□□□□ -0.39
SNX20-202ENST00000330943 COL5A1P20908 1838 aaPredicted RBP12.63□□□□□ -0.39
SNX20-202ENST00000330943 CDRT15L2A8MXV6 281 aa12.63□□□□□ -0.39
SNX20-202ENST00000330943 H3BQ15 152 aa12.63□□□□□ -0.39
SNX20-202ENST00000330943 ZNF728P0DKX0 622 aa12.63□□□□□ -0.39
SNX20-202ENST00000330943 TAGLN2P37802 199 aaKnown RBP12.63□□□□□ -0.39
SNX20-202ENST00000330943 BLKP51451 505 aa12.63□□□□□ -0.39
SNX20-202ENST00000330943 AFF3P51826 1226 aaKnown RBP12.63□□□□□ -0.39
SNX20-202ENST00000330943 C17orf67Q0P5P2 114 aa12.63□□□□□ -0.39
SNX20-202ENST00000330943 OR5L1Q8NGL2 311 aa12.63□□□□□ -0.39
SNX20-202ENST00000330943 OR10D4PQ8NGN7 298 aa12.63□□□□□ -0.39
SNX20-202ENST00000330943 RAB39BQ96DA2 213 aa12.63□□□□□ -0.39
SNX20-202ENST00000330943 MARS2Q96GW9 593 aaKnown RBP12.63□□□□□ -0.39
SNX20-202ENST00000330943 LYZL4Q96KX0 146 aa12.63□□□□□ -0.39
SNX20-202ENST00000330943 B3GALT1Q9Y5Z6 326 aa12.63□□□□□ -0.39
SNX20-202ENST00000330943 MSTNO14793 375 aa12.62□□□□□ -0.39
SNX20-202ENST00000330943 KLK2P20151 261 aa12.62□□□□□ -0.39
SNX20-202ENST00000330943 PDZD11Q5EBL8 140 aa12.62□□□□□ -0.39
SNX20-202ENST00000330943 Q8WTZ3 238 aa12.62□□□□□ -0.39
SNX20-202ENST00000330943 ABHD14AQ9BUJ0 271 aa12.62□□□□□ -0.39
SNX20-202ENST00000330943 TM2D1Q9BX74 207 aa12.62□□□□□ -0.39
SNX20-202ENST00000330943 NELFAQ9H3P2 528 aa12.62□□□□□ -0.39
SNX20-202ENST00000330943 A0A1W2PNV4 684 aa12.62□□□□□ -0.39
SNX20-202ENST00000330943 EFNA2O43921 213 aa12.62□□□□□ -0.39
SNX20-202ENST00000330943 CXCL1P09341 107 aa12.62□□□□□ -0.39
SNX20-202ENST00000330943 FASLGP48023 281 aa12.62□□□□□ -0.39
SNX20-202ENST00000330943 SMAD4Q13485 552 aaKnown RBP12.62□□□□□ -0.39
SNX20-202ENST00000330943 ARL6IP1Q15041 203 aa12.62□□□□□ -0.39
SNX20-202ENST00000330943 SPNS3Q6ZMD2 512 aa12.62□□□□□ -0.39
SNX20-202ENST00000330943 ZNF610Q8N9Z0 462 aa12.62□□□□□ -0.39
SNX20-202ENST00000330943 PIGQQ9BRB3 760 aa12.62□□□□□ -0.39
SNX20-202ENST00000330943 FAAP24Q9BTP7 215 aa12.62□□□□□ -0.39
SNX20-202ENST00000330943 PARPBPQ9NWS1 579 aa12.62□□□□□ -0.39
SNX20-202ENST00000330943 PISDQ9UG56 409 aa12.62□□□□□ -0.39
SNX20-202ENST00000330943 RBFOX3A6NFN3 312 aa12.61□□□□□ -0.39
SNX20-202ENST00000330943 H0YL77 283 aa12.61□□□□□ -0.39
SNX20-202ENST00000330943 ST8SIA3O43173 380 aa12.61□□□□□ -0.39
SNX20-202ENST00000330943 QDPRP09417 244 aa12.61□□□□□ -0.39
SNX20-202ENST00000330943 DUSP1P28562 367 aa12.61□□□□□ -0.39
SNX20-202ENST00000330943 ALDH3B1P43353 468 aa12.61□□□□□ -0.39
SNX20-202ENST00000330943 UBE2KP61086 200 aa12.61□□□□□ -0.39
SNX20-202ENST00000330943 RNF4P78317 190 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms