RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 EMG1Q92979 244 aaKnown RBP14.55□□□□□ -0.08
DDX41-201ENST00000330503 PIPOXQ9P0Z9 390 aa14.55□□□□□ -0.08
DDX41-201ENST00000330503 ST3GAL6Q9Y274 331 aa14.55□□□□□ -0.08
DDX41-201ENST00000330503 TP53TG5Q9Y2B4 290 aa14.55□□□□□ -0.08
DDX41-201ENST00000330503 SMPD2O60906 423 aa14.54□□□□□ -0.08
DDX41-201ENST00000330503 CDK10Q15131 360 aa14.54□□□□□ -0.08
DDX41-201ENST00000330503 ZMYND11Q15326 602 aa14.54□□□□□ -0.08
DDX41-201ENST00000330503 SF3B4Q15427 424 aaKnown RBP eCLIP14.54□□□□□ -0.084e-8■■■□□ 15.6
DDX41-201ENST00000330503 VAX1Q5SQQ9 334 aa14.54□□□□□ -0.08
DDX41-201ENST00000330503 FBXW12Q6X9E4 464 aa14.54□□□□□ -0.08
DDX41-201ENST00000330503 OR11H4Q8NGC9 324 aa14.54□□□□□ -0.08
DDX41-201ENST00000330503 ZFAND1Q8TCF1 268 aa14.54□□□□□ -0.08
DDX41-201ENST00000330503 HDHD3Q9BSH5 251 aaPredicted RBP14.54□□□□□ -0.08
DDX41-201ENST00000330503 FN3KRPQ9HA64 309 aa14.54□□□□□ -0.08
DDX41-201ENST00000330503 CDH20Q9HBT6 801 aa14.54□□□□□ -0.08
DDX41-201ENST00000330503 MGAT4CQ9UBM8 478 aa14.54□□□□□ -0.08
DDX41-201ENST00000330503 INTS1Q8N201 2190 aaKnown RBP14.54□□□□□ -0.08
DDX41-201ENST00000330503 J3QW42 95 aa14.54□□□□□ -0.08
DDX41-201ENST00000330503 K7ENP7 123 aa14.54□□□□□ -0.08
DDX41-201ENST00000330503 WDR1O75083 606 aa14.54□□□□□ -0.08
DDX41-201ENST00000330503 IFNA6P05013 189 aa14.54□□□□□ -0.08
DDX41-201ENST00000330503 OR4E1P0C645 316 aa14.54□□□□□ -0.08
DDX41-201ENST00000330503 AMY2BP19961 511 aa14.54□□□□□ -0.08
DDX41-201ENST00000330503 HAAOP46952 286 aa14.54□□□□□ -0.08
DDX41-201ENST00000330503 SNU13P55769 128 aaKnown RBP14.54□□□□□ -0.08
DDX41-201ENST00000330503 PPP1CBP62140 327 aa14.54□□□□□ -0.08
DDX41-201ENST00000330503 KRTCAP3Q53RY4 240 aa14.54□□□□□ -0.08
DDX41-201ENST00000330503 C1orf185Q5T7R7 199 aa14.54□□□□□ -0.08
DDX41-201ENST00000330503 C17orf107Q6ZR85 190 aa14.54□□□□□ -0.08
DDX41-201ENST00000330503 TMED4Q7Z7H5 227 aa14.54□□□□□ -0.08
DDX41-201ENST00000330503 BATF2Q8N1L9 274 aa14.54□□□□□ -0.08
DDX41-201ENST00000330503 FTMTQ8N4E7 242 aa14.54□□□□□ -0.08
DDX41-201ENST00000330503 OR10AD1Q8NGE0 317 aa14.54□□□□□ -0.08
DDX41-201ENST00000330503 CCDC120Q96HB5 630 aa14.54□□□□□ -0.08
DDX41-201ENST00000330503 HS3ST6Q96QI5 342 aa14.54□□□□□ -0.08
DDX41-201ENST00000330503 SULT4A1Q9BR01 284 aa14.54□□□□□ -0.08
DDX41-201ENST00000330503 AK3Q9UIJ7 227 aa14.54□□□□□ -0.08
DDX41-201ENST00000330503 IGKV1D-8A0A087WSZ0 117 aa14.53□□□□□ -0.08
DDX41-201ENST00000330503 ANKRD30BLA7E2S9 258 aa14.53□□□□□ -0.08
DDX41-201ENST00000330503 F8VVB4 439 aa14.53□□□□□ -0.08
DDX41-201ENST00000330503 F8VWA3 439 aa14.53□□□□□ -0.08
DDX41-201ENST00000330503 IGKV3-15P01624 115 aa14.53□□□□□ -0.08
DDX41-201ENST00000330503 BCL3P20749 454 aa14.53□□□□□ -0.08
DDX41-201ENST00000330503 UBE2MP61081 183 aaKnown RBP14.53□□□□□ -0.08
DDX41-201ENST00000330503 ERVS71-1P61550 626 aa14.53□□□□□ -0.08
DDX41-201ENST00000330503 MRPL49Q13405 166 aaKnown RBP14.53□□□□□ -0.08
DDX41-201ENST00000330503 PDCD1Q15116 288 aa14.53□□□□□ -0.08
DDX41-201ENST00000330503 C4orf46Q504U0 113 aa14.53□□□□□ -0.08
DDX41-201ENST00000330503 ACTBL2Q562R1 376 aa14.53□□□□□ -0.08
DDX41-201ENST00000330503 BRICD5Q6PL45 260 aa14.53□□□□□ -0.08
DDX41-201ENST00000330503 SAXO1Q8IYX7 474 aa14.53□□□□□ -0.08
DDX41-201ENST00000330503 ZNF431Q8TF32 576 aaPredicted RBP14.53□□□□□ -0.08
DDX41-201ENST00000330503 EXTL1Q92935 676 aa14.53□□□□□ -0.08
DDX41-201ENST00000330503 SLAMF9Q96A28 289 aa14.53□□□□□ -0.08
DDX41-201ENST00000330503 WDR89Q96FK6 387 aaPredicted RBP14.53□□□□□ -0.08
DDX41-201ENST00000330503 HYLS1Q96M11 299 aa14.53□□□□□ -0.08
DDX41-201ENST00000330503 OR2J1Q9GZK6 312 aa14.53□□□□□ -0.08
DDX41-201ENST00000330503 PCDHB16Q9NRJ7 776 aa14.53□□□□□ -0.08
DDX41-201ENST00000330503 MPC1Q9Y5U8 109 aa14.53□□□□□ -0.08
DDX41-201ENST00000330503 BOD1L1Q8NFC6 3051 aa14.53□□□□□ -0.08
DDX41-201ENST00000330503 G3V3Q6 166 aa14.53□□□□□ -0.08
DDX41-201ENST00000330503 CRHP06850 196 aa14.53□□□□□ -0.08
DDX41-201ENST00000330503 UCP2P55851 309 aa14.53□□□□□ -0.08
DDX41-201ENST00000330503 RBM11P57052 281 aaKnown RBP14.53□□□□□ -0.08
DDX41-201ENST00000330503 IGFBP7Q16270 282 aa14.53□□□□□ -0.08
DDX41-201ENST00000330503 SLC25A42Q86VD7 318 aa14.53□□□□□ -0.08
DDX41-201ENST00000330503 TMEM200AQ86VY9 491 aa14.53□□□□□ -0.08
DDX41-201ENST00000330503 ZDHHC22Q8N966 263 aa14.53□□□□□ -0.08
DDX41-201ENST00000330503 CCDC107Q8WV48 283 aa14.53□□□□□ -0.08
DDX41-201ENST00000330503 HIST1H2AAQ96QV6 131 aa14.53□□□□□ -0.08
DDX41-201ENST00000330503 RANBP3Q9H6Z4 567 aaPredicted RBP14.53□□□□□ -0.08
DDX41-201ENST00000330503 MTCH1Q9NZJ7 389 aa14.53□□□□□ -0.08
DDX41-201ENST00000330503 PAIP2BQ9ULR5 123 aaKnown RBP14.53□□□□□ -0.08
DDX41-201ENST00000330503 UBE2QL1A1L167 161 aa14.52□□□□□ -0.09
DDX41-201ENST00000330503 OR2A4O95047 310 aa14.52□□□□□ -0.09
DDX41-201ENST00000330503 CA6P23280 308 aa14.52□□□□□ -0.09
DDX41-201ENST00000330503 PTGER4P35408 488 aa14.52□□□□□ -0.09
DDX41-201ENST00000330503 P2RY6Q15077 328 aa14.52□□□□□ -0.09
DDX41-201ENST00000330503 ELP2Q6IA86 826 aa14.52□□□□□ -0.09
DDX41-201ENST00000330503 C3P1Q6ZMU1 363 aa14.52□□□□□ -0.09
DDX41-201ENST00000330503 Q8NA96 180 aa14.52□□□□□ -0.09
DDX41-201ENST00000330503 OR5H2Q8NGV7 314 aa14.52□□□□□ -0.09
DDX41-201ENST00000330503 TERB2Q8NHR7 220 aa14.52□□□□□ -0.09
DDX41-201ENST00000330503 OR2A7Q96R45 310 aa14.52□□□□□ -0.09
DDX41-201ENST00000330503 CHIAQ9BZP6 476 aa14.52□□□□□ -0.09
DDX41-201ENST00000330503 SYNGR1O43759 233 aa14.51□□□□□ -0.09
DDX41-201ENST00000330503 ZNF35P13682 527 aa14.51□□□□□ -0.09
DDX41-201ENST00000330503 ALKBH6Q3KRA9 238 aa14.51□□□□□ -0.09
DDX41-201ENST00000330503 FAM180AQ6UWF9 173 aa14.51□□□□□ -0.09
DDX41-201ENST00000330503 OR2AK2Q8NG84 335 aa14.51□□□□□ -0.09
DDX41-201ENST00000330503 SLC25A40Q8TBP6 338 aa14.51□□□□□ -0.09
DDX41-201ENST00000330503 FAM57AQ8TBR7 257 aa14.51□□□□□ -0.09
DDX41-201ENST00000330503 DYRK2Q92630 601 aa14.51□□□□□ -0.09
DDX41-201ENST00000330503 TMEM246Q9BRR3 403 aa14.51□□□□□ -0.09
DDX41-201ENST00000330503 DMXL2Q8TDJ6 3036 aa14.51□□□□□ -0.09
DDX41-201ENST00000330503 CEP295Q9C0D2 2601 aa14.51□□□□□ -0.09
DDX41-201ENST00000330503 ACACAQ13085 2346 aa14.51□□□□□ -0.09
DDX41-201ENST00000330503 TIMP3P35625 211 aa14.51□□□□□ -0.09
DDX41-201ENST00000330503 ZNF474Q6S9Z5 364 aaPredicted RBP14.51□□□□□ -0.09
DDX41-201ENST00000330503 BHLHA15Q7RTS1 189 aaPredicted RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms