RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 C1QTNF5Q9BXJ0 243 aa12.62□□□□□ -0.39
TPM3-206ENST00000330188 LINC00470Q9BZP3 86 aa12.62□□□□□ -0.39
TPM3-206ENST00000330188 SLC7A10Q9NS82 523 aa12.62□□□□□ -0.39
TPM3-206ENST00000330188 COQ3Q9NZJ6 369 aa12.62□□□□□ -0.39
TPM3-206ENST00000330188 A0A1B0GW55 424 aa12.62□□□□□ -0.39
TPM3-206ENST00000330188 C21orf140B9A014 251 aa12.62□□□□□ -0.39
TPM3-206ENST00000330188 F8VVB4 439 aa12.62□□□□□ -0.39
TPM3-206ENST00000330188 F8VWA3 439 aa12.62□□□□□ -0.39
TPM3-206ENST00000330188 XRCC2O43543 280 aa12.62□□□□□ -0.39
TPM3-206ENST00000330188 KNG1P01042 644 aa12.62□□□□□ -0.39
TPM3-206ENST00000330188 DUX4L2P0CJ85 424 aa12.62□□□□□ -0.39
TPM3-206ENST00000330188 DUX4L3P0CJ86 424 aa12.62□□□□□ -0.39
TPM3-206ENST00000330188 DUX4L4P0CJ87 422 aa12.62□□□□□ -0.39
TPM3-206ENST00000330188 DUX4L5P0CJ88 424 aa12.62□□□□□ -0.39
TPM3-206ENST00000330188 DUX4L6P0CJ89 424 aa12.62□□□□□ -0.39
TPM3-206ENST00000330188 DUX4L7P0CJ90 424 aa12.62□□□□□ -0.39
TPM3-206ENST00000330188 DTYMKP23919 212 aa12.62□□□□□ -0.39
TPM3-206ENST00000330188 FUT6P51993 359 aa12.62□□□□□ -0.39
TPM3-206ENST00000330188 PIGYQ3MUY2 71 aa12.62□□□□□ -0.39
TPM3-206ENST00000330188 POC1AQ8NBT0 407 aa12.62□□□□□ -0.39
TPM3-206ENST00000330188 BHLHE23Q8NDY6 225 aa12.62□□□□□ -0.39
TPM3-206ENST00000330188 PIK3IP1Q96FE7 263 aa12.62□□□□□ -0.39
TPM3-206ENST00000330188 C2orf50Q96LR7 162 aa12.62□□□□□ -0.39
TPM3-206ENST00000330188 CMSS1Q9BQ75 279 aaKnown RBP12.62□□□□□ -0.39
TPM3-206ENST00000330188 METTL8Q9H825 291 aaKnown RBP12.62□□□□□ -0.39
TPM3-206ENST00000330188 IL36GQ9NZH8 169 aa12.62□□□□□ -0.39
TPM3-206ENST00000330188 B4GALT7Q9UBV7 327 aa12.62□□□□□ -0.39
TPM3-206ENST00000330188 DUX4Q9UBX2 424 aa12.62□□□□□ -0.39
TPM3-206ENST00000330188 ZNF816-ZNF321PA0A0X1KG74 233 aa12.61□□□□□ -0.39
TPM3-206ENST00000330188 GEMIN2O14893 280 aaKnown RBP12.61□□□□□ -0.39
TPM3-206ENST00000330188 CTSDP07339 412 aaPredicted RBP12.61□□□□□ -0.39
TPM3-206ENST00000330188 FCGR3AP08637 254 aa12.61□□□□□ -0.39
TPM3-206ENST00000330188 HOXD4P09016 255 aaPredicted RBP12.61□□□□□ -0.39
TPM3-206ENST00000330188 RRADP55042 308 aa12.61□□□□□ -0.39
TPM3-206ENST00000330188 PPIAP62937 165 aaKnown RBP12.61□□□□□ -0.39
TPM3-206ENST00000330188 PDZK1IP1Q13113 114 aa12.61□□□□□ -0.39
TPM3-206ENST00000330188 OR1C1Q15619 314 aa12.61□□□□□ -0.39
TPM3-206ENST00000330188 PAN3Q58A45 887 aaKnown RBP12.61□□□□□ -0.39
TPM3-206ENST00000330188 PLCXD3Q63HM9 321 aa12.61□□□□□ -0.39
TPM3-206ENST00000330188 PRSS54Q6PEW0 395 aa12.61□□□□□ -0.39
TPM3-206ENST00000330188 GLRX5Q86SX6 157 aa12.61□□□□□ -0.39
TPM3-206ENST00000330188 SLC38A6Q8IZM9 456 aa12.61□□□□□ -0.39
TPM3-206ENST00000330188 OSR2Q8N2R0 312 aa12.61□□□□□ -0.39
TPM3-206ENST00000330188 NAXEQ8NCW5 288 aa12.61□□□□□ -0.39
TPM3-206ENST00000330188 STOML3Q8TAV4 291 aa12.61□□□□□ -0.39
TPM3-206ENST00000330188 ADAMTS17Q8TE56 1095 aa12.61□□□□□ -0.39
TPM3-206ENST00000330188 PIGCQ92535 297 aa12.61□□□□□ -0.39
TPM3-206ENST00000330188 MRPS24Q96EL2 167 aaKnown RBP12.61□□□□□ -0.39
TPM3-206ENST00000330188 PRDM14Q9GZV8 571 aa12.61□□□□□ -0.39
TPM3-206ENST00000330188 DNTTIP1Q9H147 329 aa12.61□□□□□ -0.39
TPM3-206ENST00000330188 DECR2Q9NUI1 292 aa12.61□□□□□ -0.39
TPM3-206ENST00000330188 OR5AC2Q9NZP5 309 aa12.61□□□□□ -0.39
TPM3-206ENST00000330188 SLC7A11Q9UPY5 501 aa12.61□□□□□ -0.39
TPM3-206ENST00000330188 FAM166BA8MTA8 275 aa12.61□□□□□ -0.39
TPM3-206ENST00000330188 M0R296 226 aa12.61□□□□□ -0.39
TPM3-206ENST00000330188 SFTPBP07988 381 aa12.61□□□□□ -0.39
TPM3-206ENST00000330188 OR5H8P0DN80 308 aa12.61□□□□□ -0.39
TPM3-206ENST00000330188 MAGEA5P43359 124 aa12.61□□□□□ -0.39
TPM3-206ENST00000330188 ARF1P84077 181 aaKnown RBP12.61□□□□□ -0.39
TPM3-206ENST00000330188 IL15RAQ13261 267 aa12.61□□□□□ -0.39
TPM3-206ENST00000330188 DCAF10Q5QP82 559 aa12.61□□□□□ -0.39
TPM3-206ENST00000330188 PLA2G2CQ5R387 149 aa12.61□□□□□ -0.39
TPM3-206ENST00000330188 COLCA1Q6ZS62 124 aa12.61□□□□□ -0.39
TPM3-206ENST00000330188 FBXL14Q8N1E6 418 aa12.61□□□□□ -0.39
TPM3-206ENST00000330188 STPG2Q8N412 459 aa12.61□□□□□ -0.39
TPM3-206ENST00000330188 OR10AD1Q8NGE0 317 aa12.61□□□□□ -0.39
TPM3-206ENST00000330188 DYRK2Q92630 601 aa12.61□□□□□ -0.39
TPM3-206ENST00000330188 TTTY12Q9BZ98 90 aa12.61□□□□□ -0.39
TPM3-206ENST00000330188 FAM117AQ9C073 453 aa12.61□□□□□ -0.39
TPM3-206ENST00000330188 SHARPINQ9H0F6 387 aa12.61□□□□□ -0.39
TPM3-206ENST00000330188 SLC6A15Q9H2J7 730 aa12.61□□□□□ -0.39
TPM3-206ENST00000330188 LIME1Q9H400 295 aa12.61□□□□□ -0.39
TPM3-206ENST00000330188 BCO1Q9HAY6 547 aa12.61□□□□□ -0.39
TPM3-206ENST00000330188 PLA2G3Q9NZ20 509 aa12.61□□□□□ -0.39
TPM3-206ENST00000330188 ATPIF1Q9UII2 106 aa12.61□□□□□ -0.39
TPM3-206ENST00000330188 SPEF1Q9Y4P9 236 aa12.61□□□□□ -0.39
TPM3-206ENST00000330188 MSGN1A6NI15 193 aa12.6□□□□□ -0.39
TPM3-206ENST00000330188 CDX4O14627 284 aaPredicted RBP12.6□□□□□ -0.39
TPM3-206ENST00000330188 IFNA2P01563 188 aa12.6□□□□□ -0.39
TPM3-206ENST00000330188 HOXB5P09067 269 aa12.6□□□□□ -0.39
TPM3-206ENST00000330188 ZNF708P17019 499 aa12.6□□□□□ -0.39
TPM3-206ENST00000330188 ITGA3P26006 1051 aa12.6□□□□□ -0.39
TPM3-206ENST00000330188 OPRM1P35372 400 aa12.6□□□□□ -0.39
TPM3-206ENST00000330188 RAB32Q13637 225 aa12.6□□□□□ -0.39
TPM3-206ENST00000330188 PLEKHN1Q494U1 663 aaPredicted RBP12.6□□□□□ -0.39
TPM3-206ENST00000330188 TMEM164Q5U3C3 297 aa12.6□□□□□ -0.39
TPM3-206ENST00000330188 TUSC5Q8IXB3 177 aa12.6□□□□□ -0.39
TPM3-206ENST00000330188 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.6□□□□□ -0.39
TPM3-206ENST00000330188 TECTBQ96PL2 329 aa12.6□□□□□ -0.39
TPM3-206ENST00000330188 CYTL1Q9NRR1 136 aa12.6□□□□□ -0.39
TPM3-206ENST00000330188 C1orf123Q9NWV4 160 aa12.6□□□□□ -0.39
TPM3-206ENST00000330188 ABI3Q9P2A4 366 aa12.6□□□□□ -0.39
TPM3-206ENST00000330188 CRYM-AS1A6NIL9 109 aa12.59□□□□□ -0.39
TPM3-206ENST00000330188 RPL36A-HNRNPH2H7BZ11 118 aa12.59□□□□□ -0.39
TPM3-206ENST00000330188 MT-CO3P00414 261 aa12.59□□□□□ -0.39
TPM3-206ENST00000330188 RBMXP38159 391 aaKnown RBP12.59□□□□□ -0.39
TPM3-206ENST00000330188 C9orf135Q5VTT2 229 aa12.59□□□□□ -0.39
TPM3-206ENST00000330188 ELP2Q6IA86 826 aa12.59□□□□□ -0.39
TPM3-206ENST00000330188 BRICD5Q6PL45 260 aa12.59□□□□□ -0.39
TPM3-206ENST00000330188 OR51F2Q8NH61 342 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms