RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 CDNFQ49AH0 187 aa17.48■□□□□ 0.39
RIPPLY3-201ENST00000329553 MOB3CQ70IA8 216 aa17.48■□□□□ 0.39
RIPPLY3-201ENST00000329553 RTN4RL2Q86UN3 420 aa17.48■□□□□ 0.39
RIPPLY3-201ENST00000329553 CCDC36Q8IYA8 594 aa17.48■□□□□ 0.39
RIPPLY3-201ENST00000329553 CISD2Q8N5K1 135 aaKnown RBP17.48■□□□□ 0.39
RIPPLY3-201ENST00000329553 OR56B2PQ8NGI1 322 aa17.48■□□□□ 0.39
RIPPLY3-201ENST00000329553 OR10K1Q8NGX5 313 aa17.48■□□□□ 0.39
RIPPLY3-201ENST00000329553 SCARB1Q8WTV0 552 aa17.48■□□□□ 0.39
RIPPLY3-201ENST00000329553 TINAGL1Q9GZM7 467 aaPredicted RBP17.48■□□□□ 0.39
RIPPLY3-201ENST00000329553 ARL6Q9H0F7 186 aa17.48■□□□□ 0.39
RIPPLY3-201ENST00000329553 FXYD6Q9H0Q3 95 aa17.48■□□□□ 0.39
RIPPLY3-201ENST00000329553 OPN3Q9H1Y3 402 aaPredicted RBP17.48■□□□□ 0.39
RIPPLY3-201ENST00000329553 PTPRQQ9UMZ3 2332 aa17.47■□□□□ 0.39
RIPPLY3-201ENST00000329553 TMEM82A0PJX8 343 aa17.47■□□□□ 0.39
RIPPLY3-201ENST00000329553 TMPRSS3P57727 454 aa17.47■□□□□ 0.39
RIPPLY3-201ENST00000329553 GMFBP60983 142 aa17.47■□□□□ 0.39
RIPPLY3-201ENST00000329553 MRPL21Q7Z2W9 205 aaKnown RBP17.47■□□□□ 0.39
RIPPLY3-201ENST00000329553 NAXEQ8NCW5 288 aa17.47■□□□□ 0.39
RIPPLY3-201ENST00000329553 OR10R2Q8NGX6 335 aa17.47■□□□□ 0.39
RIPPLY3-201ENST00000329553 SELENOIQ9C0D9 397 aa17.47■□□□□ 0.39
RIPPLY3-201ENST00000329553 PROCRQ9UNN8 238 aa17.47■□□□□ 0.39
RIPPLY3-201ENST00000329553 M0QYG6 137 aa17.47■□□□□ 0.39
RIPPLY3-201ENST00000329553 CHRM2P08172 466 aa17.47■□□□□ 0.39
RIPPLY3-201ENST00000329553 C1orf185Q5T7R7 199 aa17.47■□□□□ 0.39
RIPPLY3-201ENST00000329553 BORCS8Q96FH0 119 aa17.47■□□□□ 0.39
RIPPLY3-201ENST00000329553 OR51B6Q9H340 312 aa17.47■□□□□ 0.39
RIPPLY3-201ENST00000329553 SDHAF2Q9NX18 166 aa17.47■□□□□ 0.39
RIPPLY3-201ENST00000329553 SPTBN4Q9H254 2564 aa17.46■□□□□ 0.39
RIPPLY3-201ENST00000329553 FIGNL2A6NMB9 653 aa17.46■□□□□ 0.39
RIPPLY3-201ENST00000329553 SOCS1O15524 211 aa17.46■□□□□ 0.39
RIPPLY3-201ENST00000329553 CYB5AP00167 134 aa17.46■□□□□ 0.39
RIPPLY3-201ENST00000329553 TMEM225BP0DP42 221 aa17.46■□□□□ 0.39
RIPPLY3-201ENST00000329553 RPA2P15927 270 aa17.46■□□□□ 0.39
RIPPLY3-201ENST00000329553 RBP2P50120 134 aa17.46■□□□□ 0.39
RIPPLY3-201ENST00000329553 LY6G6FQ5SQ64 297 aa17.46■□□□□ 0.39
RIPPLY3-201ENST00000329553 ALKAL2Q6UX46 152 aa17.46■□□□□ 0.39
RIPPLY3-201ENST00000329553 GSG1LQ6UXU4 331 aa17.46■□□□□ 0.39
RIPPLY3-201ENST00000329553 S100A13Q99584 98 aa17.46■□□□□ 0.39
RIPPLY3-201ENST00000329553 CST11Q9H112 138 aa17.46■□□□□ 0.39
RIPPLY3-201ENST00000329553 CRIM1Q9NZV1 1036 aa17.46■□□□□ 0.39
RIPPLY3-201ENST00000329553 SPEF1Q9Y4P9 236 aa17.46■□□□□ 0.39
RIPPLY3-201ENST00000329553 RFPL4AA6NLU0 287 aa17.45■□□□□ 0.38
RIPPLY3-201ENST00000329553 ZNF850A8MQ14 1090 aa17.45■□□□□ 0.38
RIPPLY3-201ENST00000329553 RFPL4AL1F8VTS6 287 aa17.45■□□□□ 0.38
RIPPLY3-201ENST00000329553 SCGNO76038 276 aa17.45■□□□□ 0.38
RIPPLY3-201ENST00000329553 AMY2AP04746 511 aa17.45■□□□□ 0.38
RIPPLY3-201ENST00000329553 GNB3P16520 340 aa17.45■□□□□ 0.38
RIPPLY3-201ENST00000329553 SERPINA2P20848 420 aa17.45■□□□□ 0.38
RIPPLY3-201ENST00000329553 PTGER4P35408 488 aa17.45■□□□□ 0.38
RIPPLY3-201ENST00000329553 IDH3GP51553 393 aaPredicted RBP17.45■□□□□ 0.38
RIPPLY3-201ENST00000329553 PLCXD3Q63HM9 321 aa17.45■□□□□ 0.38
RIPPLY3-201ENST00000329553 C11orf88Q6PI97 169 aa17.45■□□□□ 0.38
RIPPLY3-201ENST00000329553 LHFPL2Q6ZUX7 228 aa17.45■□□□□ 0.38
RIPPLY3-201ENST00000329553 C12orf45Q8N5I9 185 aaPredicted RBP17.45■□□□□ 0.38
RIPPLY3-201ENST00000329553 WDR31Q8NA23 367 aa17.45■□□□□ 0.38
RIPPLY3-201ENST00000329553 FAM57AQ8TBR7 257 aa17.45■□□□□ 0.38
RIPPLY3-201ENST00000329553 BOD1Q96IK1 185 aa17.45■□□□□ 0.38
RIPPLY3-201ENST00000329553 CXorf58Q96LI9 332 aa17.45■□□□□ 0.38
RIPPLY3-201ENST00000329553 NUDT16L1Q9BRJ7 211 aaKnown RBP17.45■□□□□ 0.38
RIPPLY3-201ENST00000329553 ELL3Q9HB65 397 aaPredicted RBP17.45■□□□□ 0.38
RIPPLY3-201ENST00000329553 ZNF736B4DX44 427 aaPredicted RBP17.45■□□□□ 0.38
RIPPLY3-201ENST00000329553 SPRY1O43609 319 aaPredicted RBP17.45■□□□□ 0.38
RIPPLY3-201ENST00000329553 FAM87AP0C7U9 286 aa17.45■□□□□ 0.38
RIPPLY3-201ENST00000329553 HOXB1P14653 301 aaPredicted RBP17.45■□□□□ 0.38
RIPPLY3-201ENST00000329553 MGMTP16455 207 aa17.45■□□□□ 0.38
RIPPLY3-201ENST00000329553 FUT6P51993 359 aa17.45■□□□□ 0.38
RIPPLY3-201ENST00000329553 TMEM50BP56557 158 aa17.45■□□□□ 0.38
RIPPLY3-201ENST00000329553 BAMBIQ13145 260 aa17.45■□□□□ 0.38
RIPPLY3-201ENST00000329553 TBC1D28Q2M2D7 210 aa17.45■□□□□ 0.38
RIPPLY3-201ENST00000329553 ATPAF1Q5TC12 328 aaPredicted RBP17.45■□□□□ 0.38
RIPPLY3-201ENST00000329553 CXorf67Q86X51 503 aaPredicted RBP17.45■□□□□ 0.38
RIPPLY3-201ENST00000329553 GPR160Q9UJ42 338 aa17.45■□□□□ 0.38
RIPPLY3-201ENST00000329553 SLC7A11Q9UPY5 501 aa17.45■□□□□ 0.38
RIPPLY3-201ENST00000329553 ANGPTL7O43827 346 aa17.44■□□□□ 0.38
RIPPLY3-201ENST00000329553 PLATP00750 562 aa17.44■□□□□ 0.38
RIPPLY3-201ENST00000329553 ZP3P21754 424 aa17.44■□□□□ 0.38
RIPPLY3-201ENST00000329553 TDGF1P3P51864 188 aa17.44■□□□□ 0.38
RIPPLY3-201ENST00000329553 RPS27AP62979 156 aaKnown RBP17.44■□□□□ 0.38
RIPPLY3-201ENST00000329553 SORDQ00796 357 aa17.44■□□□□ 0.38
RIPPLY3-201ENST00000329553 PLAC9Q5JTB6 97 aa17.44■□□□□ 0.38
RIPPLY3-201ENST00000329553 FAM89BQ8N5H3 189 aa17.44■□□□□ 0.38
RIPPLY3-201ENST00000329553 C1orf162Q8NEQ5 155 aaPredicted RBP17.44■□□□□ 0.38
RIPPLY3-201ENST00000329553 URM1Q9BTM9 101 aaKnown RBP17.44■□□□□ 0.38
RIPPLY3-201ENST00000329553 C1QTNF6Q9BXI9 259 aa17.44■□□□□ 0.38
RIPPLY3-201ENST00000329553 TRAV14DV4A0A0A6YYC5 116 aa17.44■□□□□ 0.38
RIPPLY3-201ENST00000329553 IL2RAP01589 272 aa17.44■□□□□ 0.38
RIPPLY3-201ENST00000329553 CRHP06850 196 aa17.44■□□□□ 0.38
RIPPLY3-201ENST00000329553 CXADRP78310 365 aa17.44■□□□□ 0.38
RIPPLY3-201ENST00000329553 FJX1Q86VR8 437 aa17.44■□□□□ 0.38
RIPPLY3-201ENST00000329553 BPIFB2Q8N4F0 458 aa17.44■□□□□ 0.38
RIPPLY3-201ENST00000329553 OR51T1Q8NGJ9 327 aa17.44■□□□□ 0.38
RIPPLY3-201ENST00000329553 OR13C8Q8NGS7 320 aa17.44■□□□□ 0.38
RIPPLY3-201ENST00000329553 COQ8AQ8NI60 647 aa17.44■□□□□ 0.38
RIPPLY3-201ENST00000329553 CYYR1Q96J86 154 aa17.44■□□□□ 0.38
RIPPLY3-201ENST00000329553 PAPOLGQ9BWT3 736 aaKnown RBP17.44■□□□□ 0.38
RIPPLY3-201ENST00000329553 AGFG2O95081 481 aa17.43■□□□□ 0.38
RIPPLY3-201ENST00000329553 TIMP3P35625 211 aa17.43■□□□□ 0.38
RIPPLY3-201ENST00000329553 ATP1B3P54709 279 aa17.43■□□□□ 0.38
RIPPLY3-201ENST00000329553 ZNF660Q6AZW8 331 aaPredicted RBP17.43■□□□□ 0.38
RIPPLY3-201ENST00000329553 TMED4Q7Z7H5 227 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms