RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 ANOS1P23352 680 aa14.02□□□□□ -0.16
PDLIM1-201ENST00000329399 PRSS3P35030 304 aa14.02□□□□□ -0.16
PDLIM1-201ENST00000329399 MTCP1P56278 107 aa14.02□□□□□ -0.16
PDLIM1-201ENST00000329399 TNK1Q13470 666 aa14.02□□□□□ -0.16
PDLIM1-201ENST00000329399 CCBE1Q6UXH8 406 aaPredicted RBP14.02□□□□□ -0.16
PDLIM1-201ENST00000329399 ASCL4Q6XD76 172 aa14.02□□□□□ -0.16
PDLIM1-201ENST00000329399 TGIF2LYQ8IUE0 185 aa14.02□□□□□ -0.16
PDLIM1-201ENST00000329399 PXT1Q8NFP0 134 aa14.02□□□□□ -0.16
PDLIM1-201ENST00000329399 OR56B1Q8NGI3 324 aa14.02□□□□□ -0.16
PDLIM1-201ENST00000329399 ENKURQ8TC29 256 aa14.02□□□□□ -0.16
PDLIM1-201ENST00000329399 TMEM171Q8WVE6 324 aa14.02□□□□□ -0.16
PDLIM1-201ENST00000329399 HIST1H2AAQ96QV6 131 aa14.02□□□□□ -0.16
PDLIM1-201ENST00000329399 TMUB1Q9BVT8 246 aa14.02□□□□□ -0.16
PDLIM1-201ENST00000329399 GSX2Q9BZM3 304 aa14.02□□□□□ -0.16
PDLIM1-201ENST00000329399 BCL2L14Q9BZR8 327 aa14.02□□□□□ -0.16
PDLIM1-201ENST00000329399 IL36GQ9NZH8 169 aa14.02□□□□□ -0.16
PDLIM1-201ENST00000329399 ANKRD30BLA7E2S9 258 aa14.01□□□□□ -0.17
PDLIM1-201ENST00000329399 H3BUI4 141 aa14.01□□□□□ -0.17
PDLIM1-201ENST00000329399 CCL2P13500 99 aa14.01□□□□□ -0.17
PDLIM1-201ENST00000329399 FABP6P51161 128 aa14.01□□□□□ -0.17
PDLIM1-201ENST00000329399 ACTBP60709 375 aa14.01□□□□□ -0.17
PDLIM1-201ENST00000329399 ACTG1P63261 375 aa14.01□□□□□ -0.17
PDLIM1-201ENST00000329399 CEACAM21Q3KPI0 293 aa14.01□□□□□ -0.17
PDLIM1-201ENST00000329399 Q5PR19 223 aa14.01□□□□□ -0.17
PDLIM1-201ENST00000329399 SAXO1Q8IYX7 474 aa14.01□□□□□ -0.17
PDLIM1-201ENST00000329399 PAQR4Q8N4S7 273 aaPredicted RBP14.01□□□□□ -0.17
PDLIM1-201ENST00000329399 OR5A2Q8NGI9 324 aa14.01□□□□□ -0.17
PDLIM1-201ENST00000329399 TMEM59Q9BXS4 323 aa14.01□□□□□ -0.17
PDLIM1-201ENST00000329399 METTL9Q9H1A3 318 aa14.01□□□□□ -0.17
PDLIM1-201ENST00000329399 MRPL15Q9P015 296 aaKnown RBP14.01□□□□□ -0.17
PDLIM1-201ENST00000329399 TRAV18A0A075B6X5 111 aa14□□□□□ -0.17
PDLIM1-201ENST00000329399 A0A1B0GVG6 124 aa14□□□□□ -0.17
PDLIM1-201ENST00000329399 CD300LBA8K4G0 201 aa14□□□□□ -0.17
PDLIM1-201ENST00000329399 H7C417 338 aa14□□□□□ -0.17
PDLIM1-201ENST00000329399 TPD52L2O43399 206 aaKnown RBP14□□□□□ -0.17
PDLIM1-201ENST00000329399 KDM4BO94953 1096 aa14□□□□□ -0.17
PDLIM1-201ENST00000329399 MELTFP08582 738 aa14□□□□□ -0.17
PDLIM1-201ENST00000329399 GSTP1P09211 210 aaKnown RBP14□□□□□ -0.17
PDLIM1-201ENST00000329399 CSF1P09603 554 aa14□□□□□ -0.17
PDLIM1-201ENST00000329399 ZNF35P13682 527 aa14□□□□□ -0.17
PDLIM1-201ENST00000329399 PAX1P15863 534 aa14□□□□□ -0.17
PDLIM1-201ENST00000329399 FAUP35544 74 aaKnown RBP14□□□□□ -0.17
PDLIM1-201ENST00000329399 WNT5AP41221 380 aa14□□□□□ -0.17
PDLIM1-201ENST00000329399 EFNB2P52799 333 aa14□□□□□ -0.17
PDLIM1-201ENST00000329399 UCP2P55851 309 aa14□□□□□ -0.17
PDLIM1-201ENST00000329399 PLCXD3Q63HM9 321 aa14□□□□□ -0.17
PDLIM1-201ENST00000329399 VHLLQ6RSH7 139 aa14□□□□□ -0.17
PDLIM1-201ENST00000329399 CIARTQ8N365 385 aaPredicted RBP14□□□□□ -0.17
PDLIM1-201ENST00000329399 MUC15Q8N387 334 aa14□□□□□ -0.17
PDLIM1-201ENST00000329399 TNFAIP8L1Q8WVP5 186 aa14□□□□□ -0.17
PDLIM1-201ENST00000329399 PIGCQ92535 297 aa14□□□□□ -0.17
PDLIM1-201ENST00000329399 C1orf147Q96MC9 270 aaPredicted RBP14□□□□□ -0.17
PDLIM1-201ENST00000329399 C11orf54Q9H0W9 315 aaPredicted RBP14□□□□□ -0.17
PDLIM1-201ENST00000329399 RHOFQ9HBH0 211 aa14□□□□□ -0.17
PDLIM1-201ENST00000329399 GPR173Q9NS66 373 aa14□□□□□ -0.17
PDLIM1-201ENST00000329399 PTTG3PQ9NZH4 202 aa14□□□□□ -0.17
PDLIM1-201ENST00000329399 MTFP1Q9UDX5 166 aa14□□□□□ -0.17
PDLIM1-201ENST00000329399 SPEF1Q9Y4P9 236 aa14□□□□□ -0.17
PDLIM1-201ENST00000329399 CACNG2Q9Y698 323 aa14□□□□□ -0.17
PDLIM1-201ENST00000329399 FAM240BA0A1B0GVZ2 78 aa13.99□□□□□ -0.17
PDLIM1-201ENST00000329399 OR5B21A6NL26 309 aa13.99□□□□□ -0.17
PDLIM1-201ENST00000329399 AKR7A2O43488 359 aa13.99□□□□□ -0.17
PDLIM1-201ENST00000329399 ORC5O43913 435 aa13.99□□□□□ -0.17
PDLIM1-201ENST00000329399 CDC14BO60729 498 aa13.99□□□□□ -0.17
PDLIM1-201ENST00000329399 CRYAAP02489 173 aa13.99□□□□□ -0.17
PDLIM1-201ENST00000329399 LPLP06858 475 aa13.99□□□□□ -0.17
PDLIM1-201ENST00000329399 GDNFP39905 211 aa13.99□□□□□ -0.17
PDLIM1-201ENST00000329399 OR3A4PP47883 348 aa13.99□□□□□ -0.17
PDLIM1-201ENST00000329399 PPP1CBP62140 327 aa13.99□□□□□ -0.17
PDLIM1-201ENST00000329399 DGCR2P98153 550 aa13.99□□□□□ -0.17
PDLIM1-201ENST00000329399 SNTB2Q13425 540 aaKnown RBP13.99□□□□□ -0.17
PDLIM1-201ENST00000329399 UNC119Q13432 240 aa13.99□□□□□ -0.17
PDLIM1-201ENST00000329399 ADIPOQQ15848 244 aa13.99□□□□□ -0.17
PDLIM1-201ENST00000329399 PLET1Q6UQ28 207 aa13.99□□□□□ -0.17
PDLIM1-201ENST00000329399 MOB3CQ70IA8 216 aa13.99□□□□□ -0.17
PDLIM1-201ENST00000329399 NRARPQ7Z6K4 114 aa13.99□□□□□ -0.17
PDLIM1-201ENST00000329399 ZDHHC23Q8IYP9 409 aa13.99□□□□□ -0.17
PDLIM1-201ENST00000329399 LRRC75A-AS1Q8N1F1 130 aa13.99□□□□□ -0.17
PDLIM1-201ENST00000329399 FAM89BQ8N5H3 189 aa13.99□□□□□ -0.17
PDLIM1-201ENST00000329399 OR56B2PQ8NGI1 322 aa13.99□□□□□ -0.17
PDLIM1-201ENST00000329399 OR10R2Q8NGX6 335 aa13.99□□□□□ -0.17
PDLIM1-201ENST00000329399 TM2D1Q9BX74 207 aa13.99□□□□□ -0.17
PDLIM1-201ENST00000329399 AUNIPQ9H7T9 357 aa13.99□□□□□ -0.17
PDLIM1-201ENST00000329399 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.99□□□□□ -0.176e-15■■■■■ 64
PDLIM1-201ENST00000329399 DLL4Q9NR61 685 aa13.99□□□□□ -0.17
PDLIM1-201ENST00000329399 CA10Q9NS85 328 aa13.99□□□□□ -0.17
PDLIM1-201ENST00000329399 ING4Q9UNL4 249 aa13.99□□□□□ -0.17
PDLIM1-201ENST00000329399 SVEP1Q4LDE5 3571 aa13.99□□□□□ -0.17
PDLIM1-201ENST00000329399 RAB27BO00194 218 aa13.99□□□□□ -0.17
PDLIM1-201ENST00000329399 CA11O75493 328 aa13.99□□□□□ -0.17
PDLIM1-201ENST00000329399 NGFP01138 241 aa13.99□□□□□ -0.17
PDLIM1-201ENST00000329399 IGHV4-39P01824 125 aa13.99□□□□□ -0.17
PDLIM1-201ENST00000329399 CSTBP04080 98 aaKnown RBP13.99□□□□□ -0.17
PDLIM1-201ENST00000329399 CPT2P23786 658 aa13.99□□□□□ -0.17
PDLIM1-201ENST00000329399 APOBEC3AP31941 199 aaPredicted RBP13.99□□□□□ -0.17
PDLIM1-201ENST00000329399 RFX2P48378 723 aa13.99□□□□□ -0.17
PDLIM1-201ENST00000329399 ATP5J2P56134 94 aa13.99□□□□□ -0.17
PDLIM1-201ENST00000329399 ZP1P60852 638 aa13.99□□□□□ -0.17
PDLIM1-201ENST00000329399 RPS27AP62979 156 aaKnown RBP13.99□□□□□ -0.17
PDLIM1-201ENST00000329399 PNLIPRP3Q17RR3 467 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms