RNA–Protein interactions for RNA: ENST00000324932.11

NUP98-201, Transcript of nucleoporin 98, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP98, Length 6,973 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-201ENST00000324932 CD99P14209 185 aa13.04□□□□□ -0.32
NUP98-201ENST00000324932 SELENOPP49908 381 aa13.04□□□□□ -0.32
NUP98-201ENST00000324932 DSCR4P56555 118 aaPredicted RBP13.04□□□□□ -0.32
NUP98-201ENST00000324932 FNDC7Q5VTL7 733 aa13.04□□□□□ -0.32
NUP98-201ENST00000324932 RNF165Q6ZSG1 346 aa13.04□□□□□ -0.32
NUP98-201ENST00000324932 WFDC8Q8IUA0 241 aa13.04□□□□□ -0.32
NUP98-201ENST00000324932 OR2M3Q8NG83 312 aa13.04□□□□□ -0.32
NUP98-201ENST00000324932 SPACA9Q96E40 222 aaPredicted RBP13.04□□□□□ -0.32
NUP98-201ENST00000324932 PITPNC1Q9UKF7 332 aa13.04□□□□□ -0.32
NUP98-201ENST00000324932 OR5AC1P0C628 307 aa13.04□□□□□ -0.32
NUP98-201ENST00000324932 LRRC10Q5BKY1 277 aa13.04□□□□□ -0.32
NUP98-201ENST00000324932 MOB3BQ86TA1 216 aa13.04□□□□□ -0.32
NUP98-201ENST00000324932 ABHD1Q96SE0 405 aa13.04□□□□□ -0.32
NUP98-201ENST00000324932 MAP1LC3CQ9BXW4 147 aa13.04□□□□□ -0.32
NUP98-201ENST00000324932 BAZ2AQ9UIF9 1905 aaKnown RBP13.04□□□□□ -0.32
NUP98-201ENST00000324932 ZNF716A6NP11 495 aa13.04□□□□□ -0.32
NUP98-201ENST00000324932 CDC14BO60729 498 aa13.04□□□□□ -0.32
NUP98-201ENST00000324932 SP1P08047 785 aa13.04□□□□□ -0.32
NUP98-201ENST00000324932 C21orf62-AS1Q17RA5 79 aa13.04□□□□□ -0.32
NUP98-201ENST00000324932 C9orf62Q8N4C0 152 aa13.04□□□□□ -0.32
NUP98-201ENST00000324932 SPPL3Q8TCT6 385 aa13.04□□□□□ -0.32
NUP98-201ENST00000324932 SNX22Q96L94 193 aa13.04□□□□□ -0.32
NUP98-201ENST00000324932 SULT1A1P50225 295 aa13.04□□□□□ -0.32
NUP98-201ENST00000324932 Q56UQ5 140 aa13.04□□□□□ -0.32
NUP98-201ENST00000324932 C20orf196Q8IYI0 205 aa13.04□□□□□ -0.32
NUP98-201ENST00000324932 ZNF383Q8NA42 475 aa13.04□□□□□ -0.32
NUP98-201ENST00000324932 MS4A4AQ96JQ5 239 aa13.04□□□□□ -0.32
NUP98-201ENST00000324932 ACAA2P42765 397 aaKnown RBP13.04□□□□□ -0.32
NUP98-201ENST00000324932 LSM11P83369 360 aaKnown RBP eCLIP13.04□□□□□ -0.324e-18■■■□□ 16.4
NUP98-201ENST00000324932 DMRTC1Q5HYR2 192 aa13.04□□□□□ -0.32
NUP98-201ENST00000324932 FGF14Q92915 247 aa13.04□□□□□ -0.32
NUP98-201ENST00000324932 ISOC2Q96AB3 205 aa13.04□□□□□ -0.32
NUP98-201ENST00000324932 POM121Q96HA1 1249 aa13.04□□□□□ -0.32
NUP98-201ENST00000324932 XRN1Q8IZH2 1706 aaKnown RBP13.04□□□□□ -0.32
NUP98-201ENST00000324932 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.04□□□□□ -0.32
NUP98-201ENST00000324932 FAM74A7A6NL05 159 aa13.04□□□□□ -0.32
NUP98-201ENST00000324932 FBXL6Q8N531 539 aa13.04□□□□□ -0.32
NUP98-201ENST00000324932 LINC01465Q8N7H1 131 aa13.04□□□□□ -0.32
NUP98-201ENST00000324932 ATP5SQ99766 215 aa13.04□□□□□ -0.32
NUP98-201ENST00000324932 SLC6A13Q9NSD5 602 aa13.04□□□□□ -0.32
NUP98-201ENST00000324932 FAM74A3Q4VXF1 159 aa13.03□□□□□ -0.32
NUP98-201ENST00000324932 ZNF343Q6P1L6 599 aa13.03□□□□□ -0.32
NUP98-201ENST00000324932 SCGB1D4Q6XE38 83 aa13.03□□□□□ -0.32
NUP98-201ENST00000324932 MSRB3Q8IXL7 192 aa13.03□□□□□ -0.32
NUP98-201ENST00000324932 ELSPBP1Q96BH3 223 aa13.03□□□□□ -0.32
NUP98-201ENST00000324932 ASB16Q96NS5 453 aa13.03□□□□□ -0.32
NUP98-201ENST00000324932 KCNK15Q9H427 330 aa13.03□□□□□ -0.32
NUP98-201ENST00000324932 SRD5A3Q9H8P0 318 aa13.03□□□□□ -0.32
NUP98-201ENST00000324932 ZNF275Q9NSD4 429 aaPredicted RBP13.03□□□□□ -0.32
NUP98-201ENST00000324932 ZNF98A6NK75 572 aa13.03□□□□□ -0.32
NUP98-201ENST00000324932 ZGLP1P0C6A0 271 aa13.03□□□□□ -0.32
NUP98-201ENST00000324932 ZNF250P15622 560 aa13.03□□□□□ -0.32
NUP98-201ENST00000324932 HLA-BQ31612 363 aa13.03□□□□□ -0.32
NUP98-201ENST00000324932 OR5M9Q8NGP3 310 aa13.03□□□□□ -0.32
NUP98-201ENST00000324932 TECRQ9NZ01 308 aaKnown RBP13.03□□□□□ -0.32
NUP98-201ENST00000324932 COL14A1Q05707 1796 aaKnown RBP13.03□□□□□ -0.32
NUP98-201ENST00000324932 MYH15Q9Y2K3 1946 aa13.03□□□□□ -0.32
NUP98-201ENST00000324932 FGF8P55075 233 aaPredicted RBP13.03□□□□□ -0.32
NUP98-201ENST00000324932 FDX2Q6P4F2 183 aa13.03□□□□□ -0.32
NUP98-201ENST00000324932 SLC36A1Q7Z2H8 476 aa13.03□□□□□ -0.32
NUP98-201ENST00000324932 TGIF2LXQ8IUE1 241 aa13.03□□□□□ -0.32
NUP98-201ENST00000324932 WASHC3Q9Y3C0 194 aa13.03□□□□□ -0.32
NUP98-201ENST00000324932 TP53RKQ96S44 253 aa13.03□□□□□ -0.32
NUP98-201ENST00000324932 VAX2Q9UIW0 290 aa13.03□□□□□ -0.32
NUP98-201ENST00000324932 CHD2O14647 1828 aaKnown RBP13.03□□□□□ -0.32
NUP98-201ENST00000324932 PPP1CAP62136 330 aa13.03□□□□□ -0.32
NUP98-201ENST00000324932 UBE2L3P68036 154 aaKnown RBP13.03□□□□□ -0.32
NUP98-201ENST00000324932 DHRS13Q6UX07 377 aa13.03□□□□□ -0.32
NUP98-201ENST00000324932 C6orf201Q7Z4U5 140 aa13.03□□□□□ -0.32
NUP98-201ENST00000324932 TRMT61AQ96FX7 289 aaKnown RBP13.03□□□□□ -0.32
NUP98-201ENST00000324932 PRKNO60260 465 aaPredicted RBP13.02□□□□□ -0.32
NUP98-201ENST00000324932 C19orf57Q0VDD7 668 aa13.02□□□□□ -0.32
NUP98-201ENST00000324932 INSL4Q14641 139 aa13.02□□□□□ -0.32
NUP98-201ENST00000324932 OR1C1Q15619 314 aa13.02□□□□□ -0.32
NUP98-201ENST00000324932 SEBOXQ9HB31 216 aaPredicted RBP13.02□□□□□ -0.32
NUP98-201ENST00000324932 MED19A0JLT2 244 aaPredicted RBP13.02□□□□□ -0.32
NUP98-201ENST00000324932 MFNGO00587 321 aa13.02□□□□□ -0.32
NUP98-201ENST00000324932 CRYBA1P05813 215 aa13.02□□□□□ -0.32
NUP98-201ENST00000324932 DLK1P80370 383 aa13.02□□□□□ -0.32
NUP98-201ENST00000324932 KISS1RQ969F8 398 aaPredicted RBP13.02□□□□□ -0.32
NUP98-201ENST00000324932 GPX7Q96SL4 187 aaPredicted RBP13.02□□□□□ -0.32
NUP98-201ENST00000324932 C20orf141Q9NUB4 165 aa13.02□□□□□ -0.32
NUP98-201ENST00000324932 PSG11Q9UQ72 335 aa13.02□□□□□ -0.32
NUP98-201ENST00000324932 LANCL1O43813 399 aa13.02□□□□□ -0.33
NUP98-201ENST00000324932 RALYQ9UKM9 306 aaKnown RBP13.02□□□□□ -0.33
NUP98-201ENST00000324932 C11orf94C9JXX5 98 aa13.02□□□□□ -0.33
NUP98-201ENST00000324932 GOSR1O95249 250 aa13.02□□□□□ -0.33
NUP98-201ENST00000324932 ZNF770Q6IQ21 691 aaPredicted RBP13.02□□□□□ -0.33
NUP98-201ENST00000324932 OR1N1Q8NGS0 311 aa13.02□□□□□ -0.33
NUP98-201ENST00000324932 TCRBV16S1A1N1A0A5B0 115 aa13.02□□□□□ -0.33
NUP98-201ENST00000324932 PRRT4C9JH25 899 aa13.02□□□□□ -0.33
NUP98-201ENST00000324932 C17orf47Q8NEP4 570 aa13.02□□□□□ -0.33
NUP98-201ENST00000324932 MISP3Q96FF7 219 aa13.02□□□□□ -0.33
NUP98-201ENST00000324932 GRAMD2BQ96HH9 432 aa13.02□□□□□ -0.33
NUP98-201ENST00000324932 OPN4Q9UHM6 478 aa13.02□□□□□ -0.33
NUP98-201ENST00000324932 ZNF107Q9UII5 783 aaPredicted RBP13.02□□□□□ -0.33
NUP98-201ENST00000324932 SYNGR2O43760 224 aa13.02□□□□□ -0.33
NUP98-201ENST00000324932 ADAP1O75689 374 aa13.02□□□□□ -0.33
NUP98-201ENST00000324932 CORTO00230 105 aa13.01□□□□□ -0.33
NUP98-201ENST00000324932 POLR2GP62487 172 aaKnown RBP eCLIP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms