RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 SELENOIQ9C0D9 397 aa12.91□□□□□ -0.34
PRPF3-201ENST00000324862 METTL9Q9H1A3 318 aa12.91□□□□□ -0.34
PRPF3-201ENST00000324862 ATG5Q9H1Y0 275 aa12.91□□□□□ -0.34
PRPF3-201ENST00000324862 LIME1Q9H400 295 aa12.91□□□□□ -0.34
PRPF3-201ENST00000324862 ELF5Q9UKW6 265 aaPredicted RBP12.91□□□□□ -0.34
PRPF3-201ENST00000324862 MRPS7Q9Y2R9 242 aaKnown RBP12.91□□□□□ -0.34
PRPF3-201ENST00000324862 V9GYH0 126 aa12.91□□□□□ -0.34
PRPF3-201ENST00000324862 J3QRK9 145 aa12.9□□□□□ -0.34
PRPF3-201ENST00000324862 J3QT63 122 aa12.9□□□□□ -0.34
PRPF3-201ENST00000324862 HPXP02790 462 aa12.9□□□□□ -0.34
PRPF3-201ENST00000324862 MPZP25189 248 aa12.9□□□□□ -0.34
PRPF3-201ENST00000324862 CDKN1AP38936 164 aa12.9□□□□□ -0.34
PRPF3-201ENST00000324862 CD200P41217 278 aa12.9□□□□□ -0.34
PRPF3-201ENST00000324862 ART1P52961 327 aa12.9□□□□□ -0.34
PRPF3-201ENST00000324862 UBE2NLQ5JXB2 153 aa12.9□□□□□ -0.34
PRPF3-201ENST00000324862 ASCL4Q6XD76 172 aa12.9□□□□□ -0.34
PRPF3-201ENST00000324862 ZNF295-AS1Q8N0V1 137 aa12.9□□□□□ -0.34
PRPF3-201ENST00000324862 BOLLQ8N9W6 283 aaKnown RBP12.9□□□□□ -0.34
PRPF3-201ENST00000324862 LPAR5Q9H1C0 372 aa12.9□□□□□ -0.34
PRPF3-201ENST00000324862 GCM1Q9NP62 436 aa12.9□□□□□ -0.34
PRPF3-201ENST00000324862 AKIP1Q9NQ31 210 aa12.9□□□□□ -0.34
PRPF3-201ENST00000324862 C14orf119Q9NWQ9 140 aa12.9□□□□□ -0.34
PRPF3-201ENST00000324862 ZDHHC8Q9ULC8 765 aa12.9□□□□□ -0.34
PRPF3-201ENST00000324862 LYNX1G3V0Z9 82 aa12.9□□□□□ -0.34
PRPF3-201ENST00000324862 LYNX1P0DP58 116 aa12.9□□□□□ -0.34
PRPF3-201ENST00000324862 COX6B1P14854 86 aa12.9□□□□□ -0.34
PRPF3-201ENST00000324862 EGR1P18146 543 aa12.9□□□□□ -0.34
PRPF3-201ENST00000324862 CDK2P24941 298 aa12.9□□□□□ -0.34
PRPF3-201ENST00000324862 VEGFCP49767 419 aa12.9□□□□□ -0.34
PRPF3-201ENST00000324862 SNRPD2P62316 118 aaKnown RBP12.9□□□□□ -0.34
PRPF3-201ENST00000324862 TAF9Q16594 264 aa12.9□□□□□ -0.34
PRPF3-201ENST00000324862 C11orf71Q6IPW1 123 aa12.9□□□□□ -0.34
PRPF3-201ENST00000324862 BRICD5Q6PL45 260 aa12.9□□□□□ -0.34
PRPF3-201ENST00000324862 PXT1Q8NFP0 134 aa12.9□□□□□ -0.34
PRPF3-201ENST00000324862 TMEM59Q9BXS4 323 aa12.9□□□□□ -0.34
PRPF3-201ENST00000324862 CYSLTR2Q9NS75 346 aa12.9□□□□□ -0.34
PRPF3-201ENST00000324862 A0A0G2JMP0 313 aa12.89□□□□□ -0.35
PRPF3-201ENST00000324862 A0A0X1KG70 313 aa12.89□□□□□ -0.35
PRPF3-201ENST00000324862 TMEM210A6NLX4 147 aa12.89□□□□□ -0.35
PRPF3-201ENST00000324862 GEMIN2O14893 280 aaKnown RBP12.89□□□□□ -0.35
PRPF3-201ENST00000324862 SOCS1O15524 211 aa12.89□□□□□ -0.35
PRPF3-201ENST00000324862 NDUFS7O75251 213 aa12.89□□□□□ -0.35
PRPF3-201ENST00000324862 CSTBP04080 98 aaKnown RBP12.89□□□□□ -0.35
PRPF3-201ENST00000324862 GABRR1P24046 479 aa12.89□□□□□ -0.35
PRPF3-201ENST00000324862 IL24Q13007 206 aa12.89□□□□□ -0.35
PRPF3-201ENST00000324862 MOGQ16653 247 aa12.89□□□□□ -0.35
PRPF3-201ENST00000324862 LRRC28Q86X40 367 aaPredicted RBP12.89□□□□□ -0.35
PRPF3-201ENST00000324862 SPERTQ8NA61 448 aa12.89□□□□□ -0.35
PRPF3-201ENST00000324862 OR4M2Q8NGB6 313 aa12.89□□□□□ -0.35
PRPF3-201ENST00000324862 CPNE2Q96FN4 548 aaPredicted RBP12.89□□□□□ -0.35
PRPF3-201ENST00000324862 CACNG6Q9BXT2 260 aa12.89□□□□□ -0.35
PRPF3-201ENST00000324862 PLEKHF2Q9H8W4 249 aa12.89□□□□□ -0.35
PRPF3-201ENST00000324862 IL19Q9UHD0 177 aa12.89□□□□□ -0.35
PRPF3-201ENST00000324862 ETV7Q9Y603 341 aa12.89□□□□□ -0.35
PRPF3-201ENST00000324862 POLQO75417 2590 aa12.89□□□□□ -0.35
PRPF3-201ENST00000324862 CYB5R3P00387 301 aaPredicted RBP12.89□□□□□ -0.35
PRPF3-201ENST00000324862 APOA1P02647 267 aa12.89□□□□□ -0.35
PRPF3-201ENST00000324862 ZNF79Q15937 498 aa12.89□□□□□ -0.35
PRPF3-201ENST00000324862 RNASE12Q5GAN4 147 aaKnown RBP12.89□□□□□ -0.35
PRPF3-201ENST00000324862 SFRP4Q6FHJ7 346 aaPredicted RBP12.89□□□□□ -0.35
PRPF3-201ENST00000324862 TMEM200AQ86VY9 491 aa12.89□□□□□ -0.35
PRPF3-201ENST00000324862 KCNG3Q8TAE7 436 aa12.89□□□□□ -0.35
PRPF3-201ENST00000324862 WDFY2Q96P53 400 aa12.89□□□□□ -0.35
PRPF3-201ENST00000324862 PSMG3-AS1Q96PY0 264 aa12.89□□□□□ -0.35
PRPF3-201ENST00000324862 PKIBQ9C010 78 aa12.89□□□□□ -0.35
PRPF3-201ENST00000324862 TLNRD1Q9H1K6 362 aa12.89□□□□□ -0.35
PRPF3-201ENST00000324862 SAP30LQ9HAJ7 183 aa12.89□□□□□ -0.35
PRPF3-201ENST00000324862 CBLN4Q9NTU7 201 aa12.89□□□□□ -0.35
PRPF3-201ENST00000324862 TRAPPC2LH3BP13 241 aa12.88□□□□□ -0.35
PRPF3-201ENST00000324862 PTBP3O95758 552 aaKnown RBP12.88□□□□□ -0.35
PRPF3-201ENST00000324862 PRKACAP17612 351 aa12.88□□□□□ -0.35
PRPF3-201ENST00000324862 CEBPDP49716 269 aaPredicted RBP12.88□□□□□ -0.35
PRPF3-201ENST00000324862 OLFML2AQ68BL7 652 aa12.88□□□□□ -0.35
PRPF3-201ENST00000324862 FAM131AQ6UXB0 335 aa12.88□□□□□ -0.35
PRPF3-201ENST00000324862 OR5T2Q8NGG2 359 aa12.88□□□□□ -0.35
PRPF3-201ENST00000324862 OR51T1Q8NGJ9 327 aa12.88□□□□□ -0.35
PRPF3-201ENST00000324862 LRRC29Q8WV35 223 aa12.88□□□□□ -0.35
PRPF3-201ENST00000324862 ABHD1Q96SE0 405 aa12.88□□□□□ -0.35
PRPF3-201ENST00000324862 CST11Q9H112 138 aa12.88□□□□□ -0.35
PRPF3-201ENST00000324862 ABCG5Q9H222 651 aa12.88□□□□□ -0.35
PRPF3-201ENST00000324862 MS4A5Q9H3V2 200 aa12.88□□□□□ -0.35
PRPF3-201ENST00000324862 DECR2Q9NUI1 292 aa12.88□□□□□ -0.35
PRPF3-201ENST00000324862 ST3GAL6Q9Y274 331 aa12.88□□□□□ -0.35
PRPF3-201ENST00000324862 NOP16Q9Y3C1 178 aaKnown RBP12.88□□□□□ -0.35
PRPF3-201ENST00000324862 ABCA12Q86UK0 2595 aa12.88□□□□□ -0.35
PRPF3-201ENST00000324862 PTPN13Q12923 2485 aa12.88□□□□□ -0.35
PRPF3-201ENST00000324862 FABP12A6NFH5 140 aa12.88□□□□□ -0.35
PRPF3-201ENST00000324862 RAB27BO00194 218 aa12.88□□□□□ -0.35
PRPF3-201ENST00000324862 PGA5P0DJD9 388 aa12.88□□□□□ -0.35
PRPF3-201ENST00000324862 SRP9P49458 86 aaKnown RBP12.88□□□□□ -0.35
PRPF3-201ENST00000324862 RPS27AP62979 156 aaKnown RBP12.88□□□□□ -0.35
PRPF3-201ENST00000324862 IL18Q14116 193 aa12.88□□□□□ -0.35
PRPF3-201ENST00000324862 AGAP6Q5VW22 663 aa12.88□□□□□ -0.35
PRPF3-201ENST00000324862 MKXQ8IYA7 352 aa12.88□□□□□ -0.35
PRPF3-201ENST00000324862 OSR2Q8N2R0 312 aa12.88□□□□□ -0.35
PRPF3-201ENST00000324862 GCSAMQ8N6F7 178 aa12.88□□□□□ -0.35
PRPF3-201ENST00000324862 ZSCAN4Q8NAM6 433 aaPredicted RBP12.88□□□□□ -0.35
PRPF3-201ENST00000324862 NRIP2Q9BQI9 281 aa12.88□□□□□ -0.35
PRPF3-201ENST00000324862 TRAF4Q9BUZ4 470 aaPredicted RBP12.88□□□□□ -0.35
PRPF3-201ENST00000324862 RAB22AQ9UL26 194 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms