RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 ANGPTL5Q86XS5 388 aa10.03□□□□□ -0.8
TPM3-204ENST00000323144 ELMOD2Q8IZ81 293 aa10.03□□□□□ -0.8
TPM3-204ENST00000323144 DYNAPQ8N1N2 210 aa10.03□□□□□ -0.8
TPM3-204ENST00000323144 C11orf42Q8N5U0 333 aa10.03□□□□□ -0.8
TPM3-204ENST00000323144 C11orf44Q8N8P7 122 aa10.03□□□□□ -0.8
TPM3-204ENST00000323144 FAM110DQ8TAY7 271 aaPredicted RBP10.03□□□□□ -0.8
TPM3-204ENST00000323144 BCAS4Q8TDM0 211 aa10.03□□□□□ -0.8
TPM3-204ENST00000323144 NRBF2Q96F24 287 aa10.03□□□□□ -0.8
TPM3-204ENST00000323144 CIB1Q99828 191 aa10.03□□□□□ -0.8
TPM3-204ENST00000323144 SSX3Q99909 188 aa10.03□□□□□ -0.8
TPM3-204ENST00000323144 PRRG3Q9BZD7 231 aa10.03□□□□□ -0.8
TPM3-204ENST00000323144 CLN6Q9NWW5 311 aa10.03□□□□□ -0.8
TPM3-204ENST00000323144 IL36RNQ9UBH0 155 aa10.03□□□□□ -0.8
TPM3-204ENST00000323144 SLC1A7O00341 560 aa10.02□□□□□ -0.81
TPM3-204ENST00000323144 CCL1P22362 96 aa10.02□□□□□ -0.81
TPM3-204ENST00000323144 TGFBR2P37173 567 aa10.02□□□□□ -0.81
TPM3-204ENST00000323144 DLX6P56179 175 aa10.02□□□□□ -0.81
TPM3-204ENST00000323144 EFNB1P98172 346 aa10.02□□□□□ -0.81
TPM3-204ENST00000323144 HABP2Q14520 560 aaPredicted RBP10.02□□□□□ -0.81
TPM3-204ENST00000323144 LDLRAD2Q5SZI1 272 aa10.02□□□□□ -0.81
TPM3-204ENST00000323144 TMEM200BQ69YZ2 307 aa10.02□□□□□ -0.81
TPM3-204ENST00000323144 KDM4DQ6B0I6 523 aa10.02□□□□□ -0.81
TPM3-204ENST00000323144 Q6ZSR3 168 aa10.02□□□□□ -0.81
TPM3-204ENST00000323144 GID4Q8IVV7 300 aa10.02□□□□□ -0.81
TPM3-204ENST00000323144 ZNF561Q8N587 486 aa10.02□□□□□ -0.81
TPM3-204ENST00000323144 KLHDC1Q8N7A1 406 aa10.02□□□□□ -0.81
TPM3-204ENST00000323144 ASCC1Q8N9N2 400 aaKnown RBP10.02□□□□□ -0.81
TPM3-204ENST00000323144 OR5D13Q8NGL4 314 aa10.02□□□□□ -0.81
TPM3-204ENST00000323144 ZNF671Q8TAW3 534 aa10.02□□□□□ -0.81
TPM3-204ENST00000323144 PLEKHA1Q9HB21 404 aa10.02□□□□□ -0.81
TPM3-204ENST00000323144 POLDIP2Q9Y2S7 368 aa10.02□□□□□ -0.81
TPM3-204ENST00000323144 LOC107986453A0A1B0GWG9 222 aa10.01□□□□□ -0.81
TPM3-204ENST00000323144 FAM230AA0A1W2PPH8 454 aa10.01□□□□□ -0.81
TPM3-204ENST00000323144 DLGAP1O14490 977 aa10.01□□□□□ -0.81
TPM3-204ENST00000323144 INMTO95050 263 aa10.01□□□□□ -0.81
TPM3-204ENST00000323144 TK1P04183 234 aa10.01□□□□□ -0.81
TPM3-204ENST00000323144 JUNBP17275 347 aaPredicted RBP10.01□□□□□ -0.81
TPM3-204ENST00000323144 PRDX2P32119 198 aa10.01□□□□□ -0.81
TPM3-204ENST00000323144 POLR2IP36954 125 aaKnown RBP10.01□□□□□ -0.81
TPM3-204ENST00000323144 KIR3DL2P43630 455 aa10.01□□□□□ -0.81
TPM3-204ENST00000323144 ERVK11-1P61568 191 aa10.01□□□□□ -0.81
TPM3-204ENST00000323144 COL10A1Q03692 680 aa10.01□□□□□ -0.81
TPM3-204ENST00000323144 AMIGO2Q86SJ2 522 aa10.01□□□□□ -0.81
TPM3-204ENST00000323144 CATSPERDQ86XM0 798 aa10.01□□□□□ -0.81
TPM3-204ENST00000323144 ZNF573Q86YE8 665 aa10.01□□□□□ -0.81
TPM3-204ENST00000323144 YIPF7Q8N8F6 280 aa10.01□□□□□ -0.81
TPM3-204ENST00000323144 OR4C13Q8NGP0 309 aa10.01□□□□□ -0.81
TPM3-204ENST00000323144 SLAMF9Q96A28 289 aa10.01□□□□□ -0.81
TPM3-204ENST00000323144 RASL12Q9NYN1 266 aa10.01□□□□□ -0.81
TPM3-204ENST00000323144 USE1Q9NZ43 259 aa10.01□□□□□ -0.81
TPM3-204ENST00000323144 SF3B6Q9Y3B4 125 aaKnown RBP10.01□□□□□ -0.81
TPM3-204ENST00000323144 SNX5Q9Y5X3 404 aa10.01□□□□□ -0.81
TPM3-204ENST00000323144 A0A1W2PQL4 384 aaPredicted RBP10□□□□□ -0.81
TPM3-204ENST00000323144 ODF3BA8MYP8 253 aa10□□□□□ -0.81
TPM3-204ENST00000323144 G3V2T6 193 aa10□□□□□ -0.81
TPM3-204ENST00000323144 NOS1APO75052 506 aaPredicted RBP10□□□□□ -0.81
TPM3-204ENST00000323144 ZNF737O75373 536 aa10□□□□□ -0.81
TPM3-204ENST00000323144 CSF1P09603 554 aa10□□□□□ -0.81
TPM3-204ENST00000323144 IL24Q13007 206 aa10□□□□□ -0.81
TPM3-204ENST00000323144 EDDM3AQ14507 147 aa10□□□□□ -0.81
TPM3-204ENST00000323144 UBE2V2Q15819 145 aa10□□□□□ -0.81
TPM3-204ENST00000323144 TMEM219Q86XT9 240 aa10□□□□□ -0.81
TPM3-204ENST00000323144 LYG1Q8N1E2 194 aa10□□□□□ -0.81
TPM3-204ENST00000323144 PRSS35Q8N3Z0 413 aa10□□□□□ -0.81
TPM3-204ENST00000323144 OR10H4Q8NGA5 316 aa10□□□□□ -0.81
TPM3-204ENST00000323144 OR2T27Q8NH04 317 aa10□□□□□ -0.81
TPM3-204ENST00000323144 PIFOQ8TCI5 191 aa10□□□□□ -0.81
TPM3-204ENST00000323144 RNF166Q96A37 237 aaPredicted RBP10□□□□□ -0.81
TPM3-204ENST00000323144 MNTQ99583 582 aa10□□□□□ -0.81
TPM3-204ENST00000323144 NKX3-1Q99801 234 aaPredicted RBP10□□□□□ -0.81
TPM3-204ENST00000323144 GABARAPL3Q9BY60 117 aa10□□□□□ -0.81
TPM3-204ENST00000323144 PKIBQ9C010 78 aa10□□□□□ -0.81
TPM3-204ENST00000323144 CHST5Q9GZS9 411 aa10□□□□□ -0.81
TPM3-204ENST00000323144 RIBC2Q9H4K1 309 aa10□□□□□ -0.81
TPM3-204ENST00000323144 ZNF702PQ9H963 129 aa10□□□□□ -0.81
TPM3-204ENST00000323144 PLXNB1O43157 2135 aa10□□□□□ -0.81
TPM3-204ENST00000323144 TMEM82A0PJX8 343 aa9.99□□□□□ -0.81
TPM3-204ENST00000323144 SAC3D1A6NKF1 404 aa9.99□□□□□ -0.81
TPM3-204ENST00000323144 DHRS7CA6NNS2 312 aa9.99□□□□□ -0.81
TPM3-204ENST00000323144 G3V4G9 280 aa9.99□□□□□ -0.81
TPM3-204ENST00000323144 IGHA1P01876 353 aa9.99□□□□□ -0.81
TPM3-204ENST00000323144 KRT8P05787 483 aa9.99□□□□□ -0.81
TPM3-204ENST00000323144 SNU13P55769 128 aaKnown RBP9.99□□□□□ -0.81
TPM3-204ENST00000323144 EDDM3BP56851 147 aa9.99□□□□□ -0.81
TPM3-204ENST00000323144 ZNF85Q03923 595 aa9.99□□□□□ -0.81
TPM3-204ENST00000323144 HERPUD1Q15011 391 aa9.99□□□□□ -0.81
TPM3-204ENST00000323144 TMEM95Q3KNT9 176 aa9.99□□□□□ -0.81
TPM3-204ENST00000323144 TP53I3Q53FA7 332 aa9.99□□□□□ -0.81
TPM3-204ENST00000323144 TPRX1Q8N7U7 411 aa9.99□□□□□ -0.81
TPM3-204ENST00000323144 CEP19Q96LK0 163 aa9.99□□□□□ -0.81
TPM3-204ENST00000323144 MEGF9Q9H1U4 602 aa9.99□□□□□ -0.81
TPM3-204ENST00000323144 RANBP3Q9H6Z4 567 aaPredicted RBP9.99□□□□□ -0.81
TPM3-204ENST00000323144 FAM53CQ9NYF3 392 aa9.99□□□□□ -0.81
TPM3-204ENST00000323144 MTCH1Q9NZJ7 389 aa9.99□□□□□ -0.81
TPM3-204ENST00000323144 FBLN5Q9UBX5 448 aa9.99□□□□□ -0.81
TPM3-204ENST00000323144 OAZ3Q9UMX2 235 aa9.99□□□□□ -0.81
TPM3-204ENST00000323144 C17orf98A8MV24 154 aa9.98□□□□□ -0.81
TPM3-204ENST00000323144 K7N7A8 449 aa9.98□□□□□ -0.81
TPM3-204ENST00000323144 SYT7O43581 403 aa9.98□□□□□ -0.81
TPM3-204ENST00000323144 ARG1P05089 322 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms