RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 RBMXL1Q96E39 390 aaKnown RBP13.51□□□□□ -0.25
VARS2-201ENST00000321897 SAMD10Q9BYL1 202 aa13.51□□□□□ -0.25
VARS2-201ENST00000321897 REG4Q9BYZ8 158 aa13.51□□□□□ -0.25
VARS2-201ENST00000321897 METTL9Q9H1A3 318 aa13.51□□□□□ -0.25
VARS2-201ENST00000321897 DUSP15Q9H1R2 295 aaPredicted RBP13.51□□□□□ -0.25
VARS2-201ENST00000321897 ICAM5Q9UMF0 924 aa13.51□□□□□ -0.25
VARS2-201ENST00000321897 MRPS18BQ9Y676 258 aaKnown RBP13.51□□□□□ -0.25
VARS2-201ENST00000321897 SOX15O60248 233 aa13.51□□□□□ -0.25
VARS2-201ENST00000321897 DUS4LO95620 317 aaKnown RBP13.51□□□□□ -0.25
VARS2-201ENST00000321897 IFNA1P01562 189 aa13.51□□□□□ -0.25
VARS2-201ENST00000321897 MSR1P21757 451 aa13.51□□□□□ -0.25
VARS2-201ENST00000321897 RRADP55042 308 aa13.51□□□□□ -0.25
VARS2-201ENST00000321897 ARG2P78540 354 aa13.51□□□□□ -0.25
VARS2-201ENST00000321897 ACER2Q5QJU3 275 aa13.51□□□□□ -0.25
VARS2-201ENST00000321897 MAML2Q8IZL2 1156 aaPredicted RBP13.51□□□□□ -0.25
VARS2-201ENST00000321897 CMTM3Q96MX0 182 aa13.51□□□□□ -0.25
VARS2-201ENST00000321897 PRRX2Q99811 253 aa13.51□□□□□ -0.25
VARS2-201ENST00000321897 WDR13Q9H1Z4 485 aa13.51□□□□□ -0.25
VARS2-201ENST00000321897 C19orf12Q9NSK7 152 aa13.51□□□□□ -0.25
VARS2-201ENST00000321897 LAMP3Q9UQV4 416 aa13.51□□□□□ -0.25
VARS2-201ENST00000321897 PRR32B1ATL7 298 aa13.51□□□□□ -0.25
VARS2-201ENST00000321897 RPL29P47914 159 aaKnown RBP13.51□□□□□ -0.25
VARS2-201ENST00000321897 EGR4Q05215 589 aa13.51□□□□□ -0.25
VARS2-201ENST00000321897 PRSS35Q8N3Z0 413 aa13.51□□□□□ -0.25
VARS2-201ENST00000321897 SPEM1Q8N4L4 309 aa13.51□□□□□ -0.25
VARS2-201ENST00000321897 RAB39BQ96DA2 213 aa13.51□□□□□ -0.25
VARS2-201ENST00000321897 CACNA1BQ00975 2339 aa13.51□□□□□ -0.25
VARS2-201ENST00000321897 XIRP2A4UGR9 3374 aa13.5□□□□□ -0.25
VARS2-201ENST00000321897 HMGB3O15347 200 aaKnown RBP13.5□□□□□ -0.25
VARS2-201ENST00000321897 RNF151Q2KHN1 245 aa13.5□□□□□ -0.25
VARS2-201ENST00000321897 CLEC18BQ6UXF7 455 aa13.5□□□□□ -0.25
VARS2-201ENST00000321897 ANKRD37Q7Z713 158 aa13.5□□□□□ -0.25
VARS2-201ENST00000321897 CDC20BQ86Y33 519 aa13.5□□□□□ -0.25
VARS2-201ENST00000321897 CTHRC1Q96CG8 243 aa13.5□□□□□ -0.25
VARS2-201ENST00000321897 ADAT3Q96EY9 351 aaPredicted RBP13.5□□□□□ -0.25
VARS2-201ENST00000321897 FAM234AQ9H0X4 552 aa13.5□□□□□ -0.25
VARS2-201ENST00000321897 DEFB127Q9H1M4 99 aa13.5□□□□□ -0.25
VARS2-201ENST00000321897 RCL1Q9Y2P8 373 aaKnown RBP13.5□□□□□ -0.25
VARS2-201ENST00000321897 SSSCA1O60232 199 aa13.5□□□□□ -0.25
VARS2-201ENST00000321897 TIAF1O95411 115 aa13.5□□□□□ -0.25
VARS2-201ENST00000321897 ONECUT2O95948 504 aa13.5□□□□□ -0.25
VARS2-201ENST00000321897 CCDC71LQ8N9Z2 235 aa13.5□□□□□ -0.25
VARS2-201ENST00000321897 ST8SIA1Q92185 356 aa13.5□□□□□ -0.25
VARS2-201ENST00000321897 MCHR2Q969V1 340 aa13.5□□□□□ -0.25
VARS2-201ENST00000321897 PLK3Q9H4B4 646 aa13.5□□□□□ -0.25
VARS2-201ENST00000321897 MTCH2Q9Y6C9 303 aa13.5□□□□□ -0.25
VARS2-201ENST00000321897 FNDC1Q4ZHG4 1894 aaPredicted RBP13.5□□□□□ -0.25
VARS2-201ENST00000321897 TRPM7Q96QT4 1865 aa13.5□□□□□ -0.25
VARS2-201ENST00000321897 LOC101059948A0A1B0GTJ6 334 aa13.5□□□□□ -0.25
VARS2-201ENST00000321897 RAB27BO00194 218 aa13.5□□□□□ -0.25
VARS2-201ENST00000321897 GAS1P54826 345 aa13.5□□□□□ -0.25
VARS2-201ENST00000321897 PIGPP57054 158 aa13.5□□□□□ -0.25
VARS2-201ENST00000321897 Q3ZCU0 254 aa13.5□□□□□ -0.25
VARS2-201ENST00000321897 CCDC54Q8NEL0 328 aa13.5□□□□□ -0.25
VARS2-201ENST00000321897 DYRK2Q92630 601 aa13.5□□□□□ -0.25
VARS2-201ENST00000321897 A6NCN8 305 aa13.49□□□□□ -0.25
VARS2-201ENST00000321897 LINC01387J3KSC0 135 aa13.49□□□□□ -0.25
VARS2-201ENST00000321897 TCAPO15273 167 aa13.49□□□□□ -0.25
VARS2-201ENST00000321897 CST4P01036 141 aa13.49□□□□□ -0.25
VARS2-201ENST00000321897 CEACAM16Q2WEN9 425 aa13.49□□□□□ -0.25
VARS2-201ENST00000321897 DCAF12Q5T6F0 453 aa13.49□□□□□ -0.25
VARS2-201ENST00000321897 PRSS54Q6PEW0 395 aa13.49□□□□□ -0.25
VARS2-201ENST00000321897 SLC25A26Q70HW3 274 aa13.49□□□□□ -0.25
VARS2-201ENST00000321897 SLC25A45Q8N413 288 aa13.49□□□□□ -0.25
VARS2-201ENST00000321897 MAFAQ8NHW3 353 aaPredicted RBP13.49□□□□□ -0.25
VARS2-201ENST00000321897 GPX8Q8TED1 209 aa13.49□□□□□ -0.25
VARS2-201ENST00000321897 ZNF721Q8TF20 911 aa13.49□□□□□ -0.25
VARS2-201ENST00000321897 OR51M1Q9H341 326 aa13.49□□□□□ -0.25
VARS2-201ENST00000321897 HSF4Q9ULV5 492 aa13.49□□□□□ -0.25
VARS2-201ENST00000321897 DOCK10Q96BY6 2186 aa13.49□□□□□ -0.25
VARS2-201ENST00000321897 TAAR5O14804 337 aa13.49□□□□□ -0.25
VARS2-201ENST00000321897 CHRM2P08172 466 aa13.49□□□□□ -0.25
VARS2-201ENST00000321897 LPAR6P43657 344 aa13.49□□□□□ -0.25
VARS2-201ENST00000321897 SMAD4Q13485 552 aaKnown RBP13.49□□□□□ -0.25
VARS2-201ENST00000321897 GGNBP1Q5YKI7 109 aa13.49□□□□□ -0.25
VARS2-201ENST00000321897 SPIN2AQ99865 258 aa13.49□□□□□ -0.25
VARS2-201ENST00000321897 SPIN2BQ9BPZ2 258 aa13.49□□□□□ -0.25
VARS2-201ENST00000321897 KLK13Q9UKR3 277 aa13.49□□□□□ -0.25
VARS2-201ENST00000321897 CDH23Q9H251 3354 aa13.49□□□□□ -0.25
VARS2-201ENST00000321897 DHHO43323 396 aa13.49□□□□□ -0.25
VARS2-201ENST00000321897 KLF4O43474 513 aa13.49□□□□□ -0.25
VARS2-201ENST00000321897 SERPINA7P05543 415 aa13.49□□□□□ -0.25
VARS2-201ENST00000321897 POU2F2P09086 479 aa13.49□□□□□ -0.25
VARS2-201ENST00000321897 CYB561P49447 251 aa13.49□□□□□ -0.25
VARS2-201ENST00000321897 FHITP49789 147 aa13.49□□□□□ -0.25
VARS2-201ENST00000321897 EFNA3P52797 238 aa13.49□□□□□ -0.25
VARS2-201ENST00000321897 UBE2NP61088 152 aaKnown RBP13.49□□□□□ -0.25
VARS2-201ENST00000321897 THEM4Q5T1C6 240 aa13.49□□□□□ -0.25
VARS2-201ENST00000321897 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.49□□□□□ -0.25
VARS2-201ENST00000321897 FAM185AQ8N0U4 392 aa13.49□□□□□ -0.25
VARS2-201ENST00000321897 LGI3Q8N145 548 aa13.49□□□□□ -0.25
VARS2-201ENST00000321897 SLC43A2Q8N370 569 aa13.49□□□□□ -0.25
VARS2-201ENST00000321897 SARGQ9BW04 601 aa13.49□□□□□ -0.25
VARS2-201ENST00000321897 MPTX1A8MV57 137 aa13.49□□□□□ -0.25
VARS2-201ENST00000321897 GEMIN2O14893 280 aaKnown RBP13.49□□□□□ -0.25
VARS2-201ENST00000321897 LTBRP36941 435 aa13.49□□□□□ -0.25
VARS2-201ENST00000321897 LINC01590Q5TEZ4 76 aa13.49□□□□□ -0.25
VARS2-201ENST00000321897 ZNF774Q6NX45 483 aa13.49□□□□□ -0.25
VARS2-201ENST00000321897 DHRS11Q6UWP2 260 aa13.49□□□□□ -0.25
VARS2-201ENST00000321897 ZNF429Q86V71 674 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms