RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 OR1D5P58170 312 aa12.49□□□□□ -0.41
PABPC1-201ENST00000318607 VAMP2P63027 116 aa12.49□□□□□ -0.41
PABPC1-201ENST00000318607 H1FNTQ75WM6 255 aaPredicted RBP12.49□□□□□ -0.41
PABPC1-201ENST00000318607 CYB561D1Q8N8Q1 229 aa12.49□□□□□ -0.41
PABPC1-201ENST00000318607 OR1J1Q8NGS3 322 aa12.49□□□□□ -0.41
PABPC1-201ENST00000318607 SSX3Q99909 188 aa12.49□□□□□ -0.41
PABPC1-201ENST00000318607 AK3Q9UIJ7 227 aa12.49□□□□□ -0.41
PABPC1-201ENST00000318607 UBE2J1Q9Y385 318 aaPredicted RBP12.49□□□□□ -0.41
PABPC1-201ENST00000318607 ASPMQ8IZT6 3477 aa12.49□□□□□ -0.41
PABPC1-201ENST00000318607 VSTM2BA6NLU5 285 aa12.49□□□□□ -0.41
PABPC1-201ENST00000318607 F8VVB4 439 aa12.49□□□□□ -0.41
PABPC1-201ENST00000318607 F8VWA3 439 aa12.49□□□□□ -0.41
PABPC1-201ENST00000318607 ZNF43P17038 809 aa12.49□□□□□ -0.41
PABPC1-201ENST00000318607 IGFBP3P17936 291 aaPredicted RBP12.49□□□□□ -0.41
PABPC1-201ENST00000318607 SULT1A2P50226 295 aa12.49□□□□□ -0.41
PABPC1-201ENST00000318607 CLDN17P56750 224 aa12.49□□□□□ -0.41
PABPC1-201ENST00000318607 AADACL3Q5VUY0 350 aa12.49□□□□□ -0.41
PABPC1-201ENST00000318607 DMRTC2Q8IXT2 367 aaPredicted RBP12.49□□□□□ -0.41
PABPC1-201ENST00000318607 OCSTAMPQ9BR26 566 aa12.49□□□□□ -0.41
PABPC1-201ENST00000318607 UFSP2Q9NUQ7 469 aa12.49□□□□□ -0.41
PABPC1-201ENST00000318607 MS4A18H0YCH9 400 aa12.48□□□□□ -0.41
PABPC1-201ENST00000318607 AFF3P51826 1226 aaKnown RBP12.48□□□□□ -0.41
PABPC1-201ENST00000318607 GNMTQ14749 295 aa12.48□□□□□ -0.41
PABPC1-201ENST00000318607 MS4A18Q3C1V0 323 aa12.48□□□□□ -0.41
PABPC1-201ENST00000318607 TMEM268Q5VZI3 342 aa12.48□□□□□ -0.41
PABPC1-201ENST00000318607 DNM1P46Q6ZS02 220 aa12.48□□□□□ -0.41
PABPC1-201ENST00000318607 UEVLDQ8IX04 471 aa12.48□□□□□ -0.41
PABPC1-201ENST00000318607 RAB39BQ96DA2 213 aa12.48□□□□□ -0.41
PABPC1-201ENST00000318607 KLHDC7BQ96G42 594 aa12.48□□□□□ -0.41
PABPC1-201ENST00000318607 TRIOBPQ9H2D6 2365 aa12.48□□□□□ -0.41
PABPC1-201ENST00000318607 H3BQ15 152 aa12.48□□□□□ -0.41
PABPC1-201ENST00000318607 BPNT1O95861 308 aa12.48□□□□□ -0.41
PABPC1-201ENST00000318607 CXCL1P09341 107 aa12.48□□□□□ -0.41
PABPC1-201ENST00000318607 GPX4P36969 197 aaPredicted RBP12.48□□□□□ -0.41
PABPC1-201ENST00000318607 RAB5CP51148 216 aa12.48□□□□□ -0.41
PABPC1-201ENST00000318607 RPS23P62266 143 aaKnown RBP12.48□□□□□ -0.41
PABPC1-201ENST00000318607 RHEBQ15382 184 aa12.48□□□□□ -0.41
PABPC1-201ENST00000318607 TESK1Q15569 626 aa12.48□□□□□ -0.41
PABPC1-201ENST00000318607 ZNF239Q16600 458 aaKnown RBP12.48□□□□□ -0.41
PABPC1-201ENST00000318607 SLC22A25Q6T423 547 aa12.48□□□□□ -0.41
PABPC1-201ENST00000318607 POC1AQ8NBT0 407 aa12.48□□□□□ -0.41
PABPC1-201ENST00000318607 OR10S1Q8NGN2 331 aa12.48□□□□□ -0.41
PABPC1-201ENST00000318607 SCGB3A2Q96PL1 93 aa12.48□□□□□ -0.41
PABPC1-201ENST00000318607 GAB2Q9UQC2 676 aa12.48□□□□□ -0.41
PABPC1-201ENST00000318607 A0A0U1RQK1 487 aa12.47□□□□□ -0.41
PABPC1-201ENST00000318607 OR2J2O76002 312 aa12.47□□□□□ -0.41
PABPC1-201ENST00000318607 ZNF728P0DKX0 622 aa12.47□□□□□ -0.41
PABPC1-201ENST00000318607 SLC35A1P78382 337 aa12.47□□□□□ -0.41
PABPC1-201ENST00000318607 SSBP1Q04837 148 aaKnown RBP12.47□□□□□ -0.41
PABPC1-201ENST00000318607 MPV17LQ2QL34 196 aa12.47□□□□□ -0.41
PABPC1-201ENST00000318607 BTNL8Q6UX41 500 aa12.47□□□□□ -0.41
PABPC1-201ENST00000318607 THRSPQ92748 146 aa12.47□□□□□ -0.41
PABPC1-201ENST00000318607 NAT6Q93015 286 aa12.47□□□□□ -0.41
PABPC1-201ENST00000318607 SMIM8Q96KF7 97 aa12.47□□□□□ -0.41
PABPC1-201ENST00000318607 SLC46A1Q96NT5 459 aa12.47□□□□□ -0.41
PABPC1-201ENST00000318607 SLC35B3Q9H1N7 401 aa12.47□□□□□ -0.41
PABPC1-201ENST00000318607 TMEM100Q9NV29 134 aa12.47□□□□□ -0.41
PABPC1-201ENST00000318607 CLDN16Q9Y5I7 305 aa12.47□□□□□ -0.41
PABPC1-201ENST00000318607 DSPP15924 2871 aaKnown RBP12.47□□□□□ -0.41
PABPC1-201ENST00000318607 SNRPCP09234 159 aaKnown RBP12.47□□□□□ -0.41
PABPC1-201ENST00000318607 RPL23AP62750 156 aaKnown RBP12.47□□□□□ -0.41
PABPC1-201ENST00000318607 DLK1P80370 383 aa12.47□□□□□ -0.41
PABPC1-201ENST00000318607 PIGYQ3MUY2 71 aa12.47□□□□□ -0.41
PABPC1-201ENST00000318607 GRINAQ7Z429 371 aa12.47□□□□□ -0.41
PABPC1-201ENST00000318607 ZNF519Q8TB69 540 aa12.47□□□□□ -0.41
PABPC1-201ENST00000318607 HOXB13Q92826 284 aaPredicted RBP12.47□□□□□ -0.41
PABPC1-201ENST00000318607 PBDC1Q9BVG4 233 aa12.47□□□□□ -0.41
PABPC1-201ENST00000318607 PLA2G3Q9NZ20 509 aa12.47□□□□□ -0.41
PABPC1-201ENST00000318607 RBM7Q9Y580 266 aaKnown RBP12.47□□□□□ -0.41
PABPC1-201ENST00000318607 PMS2P1A4D2B8 440 aa12.47□□□□□ -0.41
PABPC1-201ENST00000318607 FCARP24071 287 aa12.47□□□□□ -0.41
PABPC1-201ENST00000318607 FPR2P25090 351 aa12.47□□□□□ -0.41
PABPC1-201ENST00000318607 SNCAP37840 140 aa12.47□□□□□ -0.41
PABPC1-201ENST00000318607 ALDH3B1P43353 468 aa12.47□□□□□ -0.41
PABPC1-201ENST00000318607 ROM1Q03395 351 aa12.47□□□□□ -0.41
PABPC1-201ENST00000318607 MYBPHQ13203 477 aa12.47□□□□□ -0.41
PABPC1-201ENST00000318607 TMEM240Q5SV17 173 aa12.47□□□□□ -0.41
PABPC1-201ENST00000318607 SERINC1Q9NRX5 453 aa12.47□□□□□ -0.41
PABPC1-201ENST00000318607 PPP4R1LQ9P1A2 415 aa12.47□□□□□ -0.41
PABPC1-201ENST00000318607 KIAA1549LQ6ZVL6 1849 aa12.47□□□□□ -0.41
PABPC1-201ENST00000318607 A0A087X0M5 115 aa12.46□□□□□ -0.41
PABPC1-201ENST00000318607 TRAV39A0A0B4J263 110 aa12.46□□□□□ -0.41
PABPC1-201ENST00000318607 A0A1B0GX30 115 aa12.46□□□□□ -0.41
PABPC1-201ENST00000318607 UBE2CO00762 179 aa12.46□□□□□ -0.41
PABPC1-201ENST00000318607 H2AFB1P0C5Y9 115 aa12.46□□□□□ -0.41
PABPC1-201ENST00000318607 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.46□□□□□ -0.412e-19■■■□□ 14.9
PABPC1-201ENST00000318607 ISXQ2M1V0 245 aa12.46□□□□□ -0.41
PABPC1-201ENST00000318607 C1orf100Q5SVJ3 147 aa12.46□□□□□ -0.41
PABPC1-201ENST00000318607 NSUN5P2Q63ZY6 315 aa12.46□□□□□ -0.41
PABPC1-201ENST00000318607 SLC43A2Q8N370 569 aa12.46□□□□□ -0.41
PABPC1-201ENST00000318607 SAT2Q96F10 170 aaPredicted RBP12.46□□□□□ -0.41
PABPC1-201ENST00000318607 AQP10Q96PS8 301 aa12.46□□□□□ -0.41
PABPC1-201ENST00000318607 FAM206AQ9NX38 181 aa12.46□□□□□ -0.41
PABPC1-201ENST00000318607 SLC34A2O95436 690 aa12.46□□□□□ -0.41
PABPC1-201ENST00000318607 LCATP04180 440 aa12.46□□□□□ -0.41
PABPC1-201ENST00000318607 NR2C1P13056 603 aa12.46□□□□□ -0.41
PABPC1-201ENST00000318607 SLC6A8P48029 635 aa12.46□□□□□ -0.41
PABPC1-201ENST00000318607 ZNF41P51814 821 aaPredicted RBP12.46□□□□□ -0.41
PABPC1-201ENST00000318607 ELLP55199 621 aaPredicted RBP12.46□□□□□ -0.41
PABPC1-201ENST00000318607 HERV-K104P61576 105 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms