RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 NPY4RP50391 375 aa12.33□□□□□ -0.44
VRK3-201ENST00000316763 ABLIM2Q6H8Q1 611 aa12.33□□□□□ -0.44
VRK3-201ENST00000316763 C1QL2Q7Z5L3 287 aa12.33□□□□□ -0.44
VRK3-201ENST00000316763 OR1F12Q8NHA8 337 aa12.33□□□□□ -0.44
VRK3-201ENST00000316763 SGK3Q96BR1 496 aa12.33□□□□□ -0.44
VRK3-201ENST00000316763 FN3KRPQ9HA64 309 aa12.33□□□□□ -0.44
VRK3-201ENST00000316763 TMEM38BQ9NVV0 291 aa12.33□□□□□ -0.44
VRK3-201ENST00000316763 SHPKQ9UHJ6 478 aa12.33□□□□□ -0.44
VRK3-201ENST00000316763 LIPGQ9Y5X9 500 aa12.33□□□□□ -0.44
VRK3-201ENST00000316763 DBX1A6NMT0 343 aa12.32□□□□□ -0.44
VRK3-201ENST00000316763 ZNF716A6NP11 495 aa12.32□□□□□ -0.44
VRK3-201ENST00000316763 FOXI3A8MTJ6 420 aaPredicted RBP12.32□□□□□ -0.44
VRK3-201ENST00000316763 KRBOX1C9JBD0 128 aa12.32□□□□□ -0.44
VRK3-201ENST00000316763 SFT2D2O95562 160 aa12.32□□□□□ -0.44
VRK3-201ENST00000316763 PRKACBP22694 351 aa12.32□□□□□ -0.44
VRK3-201ENST00000316763 CRYGSP22914 178 aa12.32□□□□□ -0.44
VRK3-201ENST00000316763 SNU13P55769 128 aaKnown RBP12.32□□□□□ -0.44
VRK3-201ENST00000316763 CHRFAM7AQ494W8 412 aa12.32□□□□□ -0.44
VRK3-201ENST00000316763 MYO7BQ6PIF6 2116 aa12.32□□□□□ -0.44
VRK3-201ENST00000316763 Q6ZS92 163 aa12.32□□□□□ -0.44
VRK3-201ENST00000316763 PIGTQ969N2 578 aa12.32□□□□□ -0.44
VRK3-201ENST00000316763 SPSB1Q96BD6 273 aa12.32□□□□□ -0.44
VRK3-201ENST00000316763 ZNF775Q96BV0 537 aaPredicted RBP12.32□□□□□ -0.44
VRK3-201ENST00000316763 PHYHIPLQ96FC7 376 aa12.32□□□□□ -0.44
VRK3-201ENST00000316763 WBP1Q96G27 269 aa12.32□□□□□ -0.44
VRK3-201ENST00000316763 CCDC120Q96HB5 630 aa12.32□□□□□ -0.44
VRK3-201ENST00000316763 NMES1Q9C002 83 aa12.32□□□□□ -0.44
VRK3-201ENST00000316763 CRLF2Q9HC73 371 aa12.32□□□□□ -0.44
VRK3-201ENST00000316763 C13orf42A0A1B0GVH6 325 aa12.31□□□□□ -0.44
VRK3-201ENST00000316763 SYNGR3O43761 229 aa12.31□□□□□ -0.44
VRK3-201ENST00000316763 CYTIPO60759 359 aa12.31□□□□□ -0.44
VRK3-201ENST00000316763 IGHG3P01860 377 aa12.31□□□□□ -0.44
VRK3-201ENST00000316763 RLN2P04090 185 aa12.31□□□□□ -0.44
VRK3-201ENST00000316763 TMEM225BP0DP42 221 aa12.31□□□□□ -0.44
VRK3-201ENST00000316763 PSMB6P28072 239 aa12.31□□□□□ -0.44
VRK3-201ENST00000316763 SERPINF1P36955 418 aa12.31□□□□□ -0.44
VRK3-201ENST00000316763 NUP62P37198 522 aaPredicted RBP12.31□□□□□ -0.44
VRK3-201ENST00000316763 PCBD1P61457 104 aa12.31□□□□□ -0.44
VRK3-201ENST00000316763 PMP22Q01453 160 aa12.31□□□□□ -0.44
VRK3-201ENST00000316763 CNN3Q15417 329 aaKnown RBP12.31□□□□□ -0.44
VRK3-201ENST00000316763 NSUN5P2Q63ZY6 315 aa12.31□□□□□ -0.44
VRK3-201ENST00000316763 CRIP3Q6Q6R5 217 aa12.31□□□□□ -0.44
VRK3-201ENST00000316763 HSD17B13Q7Z5P4 300 aaPredicted RBP12.31□□□□□ -0.44
VRK3-201ENST00000316763 OR10K1Q8NGX5 313 aa12.31□□□□□ -0.44
VRK3-201ENST00000316763 ZNF837Q96EG3 531 aaPredicted RBP12.31□□□□□ -0.44
VRK3-201ENST00000316763 REEP6Q96HR9 211 aa12.31□□□□□ -0.44
VRK3-201ENST00000316763 ZNF845Q96IR2 970 aaPredicted RBP12.31□□□□□ -0.44
VRK3-201ENST00000316763 METTL9Q9H1A3 318 aa12.31□□□□□ -0.44
VRK3-201ENST00000316763 DEFB127Q9H1M4 99 aa12.31□□□□□ -0.44
VRK3-201ENST00000316763 PPA2Q9H2U2 334 aa12.31□□□□□ -0.44
VRK3-201ENST00000316763 C5orf66Q9H5L9 145 aa12.31□□□□□ -0.44
VRK3-201ENST00000316763 CHMP1AQ9HD42 196 aaPredicted RBP12.31□□□□□ -0.44
VRK3-201ENST00000316763 EHFQ9NZC4 300 aa12.31□□□□□ -0.44
VRK3-201ENST00000316763 ZNF391Q9UJN7 358 aa12.31□□□□□ -0.44
VRK3-201ENST00000316763 TRGV5A0A0B4J1U4 118 aa12.31□□□□□ -0.44
VRK3-201ENST00000316763 CRHP06850 196 aa12.31□□□□□ -0.44
VRK3-201ENST00000316763 ECI1P42126 302 aa12.31□□□□□ -0.44
VRK3-201ENST00000316763 MTCP1P56278 107 aa12.31□□□□□ -0.44
VRK3-201ENST00000316763 ZNF169Q14929 603 aaPredicted RBP12.31□□□□□ -0.44
VRK3-201ENST00000316763 ATXN7L3Q14CW9 347 aaPredicted RBP12.31□□□□□ -0.44
VRK3-201ENST00000316763 SNAI3Q3KNW1 292 aa12.31□□□□□ -0.44
VRK3-201ENST00000316763 DMRTC1Q5HYR2 192 aa12.31□□□□□ -0.44
VRK3-201ENST00000316763 PEG10Q86TG7 708 aaKnown RBP12.31□□□□□ -0.44
VRK3-201ENST00000316763 LHFPL1Q86WI0 220 aa12.31□□□□□ -0.44
VRK3-201ENST00000316763 PXT1Q8NFP0 134 aa12.31□□□□□ -0.44
VRK3-201ENST00000316763 OR5AP2Q8NGF4 316 aa12.31□□□□□ -0.44
VRK3-201ENST00000316763 OR1S1Q8NH92 325 aa12.31□□□□□ -0.44
VRK3-201ENST00000316763 ROBO4Q8WZ75 1007 aa12.31□□□□□ -0.44
VRK3-201ENST00000316763 ZNF471Q9BX82 626 aaPredicted RBP12.31□□□□□ -0.44
VRK3-201ENST00000316763 RAB18Q9NP72 206 aa12.31□□□□□ -0.44
VRK3-201ENST00000316763 GPR173Q9NS66 373 aa12.31□□□□□ -0.44
VRK3-201ENST00000316763 TIMM10BQ9Y5J6 103 aa12.31□□□□□ -0.44
VRK3-201ENST00000316763 ITPR1Q14643 2758 aa12.3□□□□□ -0.44
VRK3-201ENST00000316763 RNF222A6NCQ9 220 aa12.3□□□□□ -0.44
VRK3-201ENST00000316763 A8MXK9 166 aa12.3□□□□□ -0.44
VRK3-201ENST00000316763 CSTBP04080 98 aaKnown RBP12.3□□□□□ -0.44
VRK3-201ENST00000316763 LCATP04180 440 aa12.3□□□□□ -0.44
VRK3-201ENST00000316763 SERPINA5P05154 406 aa12.3□□□□□ -0.44
VRK3-201ENST00000316763 SRYQ05066 204 aa12.3□□□□□ -0.44
VRK3-201ENST00000316763 SURF2Q15527 256 aaPredicted RBP12.3□□□□□ -0.44
VRK3-201ENST00000316763 PLEKHN1Q494U1 663 aaPredicted RBP12.3□□□□□ -0.44
VRK3-201ENST00000316763 RIPPLY2Q5TAB7 128 aa12.3□□□□□ -0.44
VRK3-201ENST00000316763 ZNF774Q6NX45 483 aa12.3□□□□□ -0.44
VRK3-201ENST00000316763 PLXDC2Q6UX71 529 aa12.3□□□□□ -0.44
VRK3-201ENST00000316763 EIF4E3Q8N5X7 224 aaKnown RBP12.3□□□□□ -0.44
VRK3-201ENST00000316763 OR13G1Q8NGZ3 307 aa12.3□□□□□ -0.44
VRK3-201ENST00000316763 EMG1Q92979 244 aaKnown RBP12.3□□□□□ -0.44
VRK3-201ENST00000316763 ARPC5LQ9BPX5 153 aa12.3□□□□□ -0.44
VRK3-201ENST00000316763 LDAHQ9H6V9 325 aa12.3□□□□□ -0.44
VRK3-201ENST00000316763 PLEKHJ1Q9NW61 149 aa12.3□□□□□ -0.44
VRK3-201ENST00000316763 RASL12Q9NYN1 266 aa12.3□□□□□ -0.44
VRK3-201ENST00000316763 MBD2Q9UBB5 411 aa12.3□□□□□ -0.44
VRK3-201ENST00000316763 SPRR3Q9UBC9 169 aa12.3□□□□□ -0.44
VRK3-201ENST00000316763 OSGIN2Q9Y236 505 aa12.3□□□□□ -0.44
VRK3-201ENST00000316763 BOD1L1Q8NFC6 3051 aa12.3□□□□□ -0.44
VRK3-201ENST00000316763 CACNA1BQ00975 2339 aa12.29□□□□□ -0.44
VRK3-201ENST00000316763 IGKV3D-15A0A087WSY6 115 aa12.29□□□□□ -0.44
VRK3-201ENST00000316763 FGF2P09038 288 aa12.29□□□□□ -0.44
VRK3-201ENST00000316763 HTR5AP47898 357 aa12.29□□□□□ -0.44
VRK3-201ENST00000316763 LUMP51884 338 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms