RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 WDR13Q9H1Z4 485 aa5.99□□□□□ -1.45
LYSMD3-201ENST00000315948 TREM2Q9NZC2 230 aa5.99□□□□□ -1.45
LYSMD3-201ENST00000315948 AK3Q9UIJ7 227 aa5.99□□□□□ -1.45
LYSMD3-201ENST00000315948 FIGNL2A6NMB9 653 aa5.99□□□□□ -1.45
LYSMD3-201ENST00000315948 TSC22D2O75157 780 aa5.99□□□□□ -1.45
LYSMD3-201ENST00000315948 HOXD11P31277 338 aaPredicted RBP5.99□□□□□ -1.45
LYSMD3-201ENST00000315948 UBE2NP61088 152 aaKnown RBP5.99□□□□□ -1.45
LYSMD3-201ENST00000315948 MRPS15P82914 257 aaKnown RBP5.99□□□□□ -1.45
LYSMD3-201ENST00000315948 PSG7Q13046 419 aa5.99□□□□□ -1.45
LYSMD3-201ENST00000315948 ZNF486Q96H40 463 aaPredicted RBP5.99□□□□□ -1.45
LYSMD3-201ENST00000315948 Q96M66 194 aa5.99□□□□□ -1.45
LYSMD3-201ENST00000315948 GPR137Q96N19 417 aa5.99□□□□□ -1.45
LYSMD3-201ENST00000315948 MRI1Q9BV20 369 aa5.99□□□□□ -1.45
LYSMD3-201ENST00000315948 GP6Q9HCN6 339 aa5.99□□□□□ -1.45
LYSMD3-201ENST00000315948 IFT46Q9NQC8 304 aa5.99□□□□□ -1.45
LYSMD3-201ENST00000315948 PLEKHJ1Q9NW61 149 aa5.99□□□□□ -1.45
LYSMD3-201ENST00000315948 ZNF175Q9Y473 711 aa5.99□□□□□ -1.45
LYSMD3-201ENST00000315948 MED13LQ71F56 2210 aa5.99□□□□□ -1.45
LYSMD3-201ENST00000315948 MKRN2OSH3BPM6 223 aa5.99□□□□□ -1.45
LYSMD3-201ENST00000315948 NOS1APO75052 506 aaPredicted RBP5.99□□□□□ -1.45
LYSMD3-201ENST00000315948 DHFRP00374 187 aa5.99□□□□□ -1.45
LYSMD3-201ENST00000315948 CSTBP04080 98 aaKnown RBP5.99□□□□□ -1.45
LYSMD3-201ENST00000315948 AKR1C4P17516 323 aa5.99□□□□□ -1.45
LYSMD3-201ENST00000315948 RAB6AP20340 208 aa5.99□□□□□ -1.45
LYSMD3-201ENST00000315948 MPPED2Q15777 294 aa5.99□□□□□ -1.45
LYSMD3-201ENST00000315948 C4orf46Q504U0 113 aa5.99□□□□□ -1.45
LYSMD3-201ENST00000315948 OR1J1Q8NGS3 322 aa5.99□□□□□ -1.45
LYSMD3-201ENST00000315948 APOBEC3DQ96AK3 386 aaPredicted RBP5.99□□□□□ -1.45
LYSMD3-201ENST00000315948 CST11Q9H112 138 aa5.99□□□□□ -1.45
LYSMD3-201ENST00000315948 UFSP2Q9NUQ7 469 aa5.99□□□□□ -1.45
LYSMD3-201ENST00000315948 WNT9BO14905 357 aa5.98□□□□□ -1.45
LYSMD3-201ENST00000315948 CSF1P09603 554 aa5.98□□□□□ -1.45
LYSMD3-201ENST00000315948 C20orf204Q6ZNR8 217 aa5.98□□□□□ -1.45
LYSMD3-201ENST00000315948 Q6ZSR3 168 aa5.98□□□□□ -1.45
LYSMD3-201ENST00000315948 SLC36A1Q7Z2H8 476 aa5.98□□□□□ -1.45
LYSMD3-201ENST00000315948 DOLPP1Q86YN1 238 aa5.98□□□□□ -1.45
LYSMD3-201ENST00000315948 ZCCHC24Q8N2G6 241 aaKnown RBP5.98□□□□□ -1.45
LYSMD3-201ENST00000315948 OR4K15Q8NH41 348 aa5.98□□□□□ -1.45
LYSMD3-201ENST00000315948 CASTOR1Q8WTX7 329 aa5.98□□□□□ -1.45
LYSMD3-201ENST00000315948 FAM172BPA6NC97 362 aa5.98□□□□□ -1.45
LYSMD3-201ENST00000315948 MPTX1A8MV57 137 aa5.98□□□□□ -1.45
LYSMD3-201ENST00000315948 K7ENP7 123 aa5.98□□□□□ -1.45
LYSMD3-201ENST00000315948 HS3ST1O14792 307 aa5.98□□□□□ -1.45
LYSMD3-201ENST00000315948 ECDO95905 644 aaPredicted RBP5.98□□□□□ -1.45
LYSMD3-201ENST00000315948 GRPP07492 148 aa5.98□□□□□ -1.45
LYSMD3-201ENST00000315948 CDSNQ15517 529 aa5.98□□□□□ -1.45
LYSMD3-201ENST00000315948 NSUN5P2Q63ZY6 315 aa5.98□□□□□ -1.45
LYSMD3-201ENST00000315948 INO80CQ6PI98 192 aaPredicted RBP5.98□□□□□ -1.45
LYSMD3-201ENST00000315948 NLRC3Q7RTR2 1065 aa5.98□□□□□ -1.45
LYSMD3-201ENST00000315948 TGIF2LYQ8IUE0 185 aa5.98□□□□□ -1.45
LYSMD3-201ENST00000315948 FAM89BQ8N5H3 189 aa5.98□□□□□ -1.45
LYSMD3-201ENST00000315948 ST8SIA4Q92187 359 aa5.98□□□□□ -1.45
LYSMD3-201ENST00000315948 SEC22AQ96IW7 307 aa5.98□□□□□ -1.45
LYSMD3-201ENST00000315948 KCNN3Q9UGI6 736 aa5.98□□□□□ -1.45
LYSMD3-201ENST00000315948 PLEKHA6Q9Y2H5 1048 aa5.98□□□□□ -1.45
LYSMD3-201ENST00000315948 IGHV1-18A0A0C4DH31 117 aa5.98□□□□□ -1.45
LYSMD3-201ENST00000315948 PQLC2LA1A4F0 135 aa5.98□□□□□ -1.45
LYSMD3-201ENST00000315948 CDIPTO14735 213 aa5.98□□□□□ -1.45
LYSMD3-201ENST00000315948 APOC1P02654 83 aa5.98□□□□□ -1.45
LYSMD3-201ENST00000315948 CCKARP32238 428 aa5.98□□□□□ -1.45
LYSMD3-201ENST00000315948 ARR3P36575 388 aa5.98□□□□□ -1.45
LYSMD3-201ENST00000315948 SCAND1P57086 179 aa5.98□□□□□ -1.45
LYSMD3-201ENST00000315948 TAS2R19P59542 299 aa5.98□□□□□ -1.45
LYSMD3-201ENST00000315948 PPP1CBP62140 327 aa5.98□□□□□ -1.45
LYSMD3-201ENST00000315948 RBMS2Q15434 407 aaKnown RBP5.98□□□□□ -1.45
LYSMD3-201ENST00000315948 RNASE10Q5GAN6 216 aaKnown RBP5.98□□□□□ -1.45
LYSMD3-201ENST00000315948 RPUSD3Q6P087 351 aaKnown RBP5.98□□□□□ -1.45
LYSMD3-201ENST00000315948 GLDNQ6ZMI3 551 aaPredicted RBP5.98□□□□□ -1.45
LYSMD3-201ENST00000315948 NOXA1Q86UR1 476 aa5.98□□□□□ -1.45
LYSMD3-201ENST00000315948 RDH5Q92781 318 aa5.98□□□□□ -1.45
LYSMD3-201ENST00000315948 WNT2BQ93097 391 aa5.98□□□□□ -1.45
LYSMD3-201ENST00000315948 MGAT4CQ9UBM8 478 aa5.98□□□□□ -1.45
LYSMD3-201ENST00000315948 F5H5P2 479 aa5.97□□□□□ -1.45
LYSMD3-201ENST00000315948 XRCC2O43543 280 aa5.97□□□□□ -1.45
LYSMD3-201ENST00000315948 AP3S2P59780 193 aa5.97□□□□□ -1.45
LYSMD3-201ENST00000315948 PPP1R1AQ13522 171 aa5.97□□□□□ -1.45
LYSMD3-201ENST00000315948 LY6DQ14210 128 aa5.97□□□□□ -1.45
LYSMD3-201ENST00000315948 LRRC37A5PQ49AS3 106 aa5.97□□□□□ -1.45
LYSMD3-201ENST00000315948 PRAMEF6Q5VXH4 476 aa5.97□□□□□ -1.45
LYSMD3-201ENST00000315948 OR5T2Q8NGG2 359 aa5.97□□□□□ -1.45
LYSMD3-201ENST00000315948 OR2T35Q8NGX2 323 aa5.97□□□□□ -1.45
LYSMD3-201ENST00000315948 OR13G1Q8NGZ3 307 aa5.97□□□□□ -1.45
LYSMD3-201ENST00000315948 KLF14Q8TD94 323 aaPredicted RBP5.97□□□□□ -1.45
LYSMD3-201ENST00000315948 PIPOXQ9P0Z9 390 aa5.97□□□□□ -1.45
LYSMD3-201ENST00000315948 HSPB11Q9Y547 144 aa5.97□□□□□ -1.45
LYSMD3-201ENST00000315948 CHD3Q12873 2000 aaKnown RBP5.97□□□□□ -1.45
LYSMD3-201ENST00000315948 USP9XQ93008 2570 aaPredicted RBP5.97□□□□□ -1.45
LYSMD3-201ENST00000315948 A0A0G2JNJ9 132 aa5.97□□□□□ -1.45
LYSMD3-201ENST00000315948 TMEM82A0PJX8 343 aa5.97□□□□□ -1.45
LYSMD3-201ENST00000315948 GOSR2O14653 212 aa5.97□□□□□ -1.45
LYSMD3-201ENST00000315948 MLNRO43193 412 aa5.97□□□□□ -1.45
LYSMD3-201ENST00000315948 ATP6V1G1O75348 118 aa5.97□□□□□ -1.45
LYSMD3-201ENST00000315948 MELTFP08582 738 aa5.97□□□□□ -1.45
LYSMD3-201ENST00000315948 GSTT2BP0CG30 244 aa5.97□□□□□ -1.45
LYSMD3-201ENST00000315948 GLRA1P23415 457 aa5.97□□□□□ -1.45
LYSMD3-201ENST00000315948 TDGF1P3P51864 188 aa5.97□□□□□ -1.45
LYSMD3-201ENST00000315948 UCP2P55851 309 aa5.97□□□□□ -1.45
LYSMD3-201ENST00000315948 BTG1P62324 171 aa5.97□□□□□ -1.45
LYSMD3-201ENST00000315948 IGSF11Q5DX21 431 aa5.97□□□□□ -1.45
LYSMD3-201ENST00000315948 TMEM53Q6P2H8 277 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms