RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 GATAD2BQ8WXI9 593 aa11.96□□□□□ -0.49
PPP1CA-201ENST00000312989 GCDHQ92947 438 aaPredicted RBP11.96□□□□□ -0.49
PPP1CA-201ENST00000312989 AJUBAQ96IF1 538 aa11.96□□□□□ -0.49
PPP1CA-201ENST00000312989 ERVK13-1Q9NX77 482 aa11.96□□□□□ -0.49
PPP1CA-201ENST00000312989 ONECUT1Q9UBC0 465 aa11.96□□□□□ -0.49
PPP1CA-201ENST00000312989 LIMS3P0CW19 117 aa11.95□□□□□ -0.5
PPP1CA-201ENST00000312989 LIMS4P0CW20 117 aa11.95□□□□□ -0.5
PPP1CA-201ENST00000312989 PRDX2P32119 198 aa11.95□□□□□ -0.5
PPP1CA-201ENST00000312989 RELBQ01201 579 aa11.95□□□□□ -0.5
PPP1CA-201ENST00000312989 KLRD1Q13241 179 aa11.95□□□□□ -0.5
PPP1CA-201ENST00000312989 SMIM21Q3B7S5 101 aa11.95□□□□□ -0.5
PPP1CA-201ENST00000312989 C1orf122Q6ZSJ8 110 aa11.95□□□□□ -0.5
PPP1CA-201ENST00000312989 FAM220AQ7Z4H9 259 aa11.95□□□□□ -0.5
PPP1CA-201ENST00000312989 LHFPL3Q86UP9 236 aa11.95□□□□□ -0.5
PPP1CA-201ENST00000312989 LDLRAD3Q86YD5 345 aa11.95□□□□□ -0.5
PPP1CA-201ENST00000312989 PDZD9Q8IXQ8 264 aa11.95□□□□□ -0.5
PPP1CA-201ENST00000312989 PNKDQ8N490 385 aa11.95□□□□□ -0.5
PPP1CA-201ENST00000312989 RDH12Q96NR8 316 aa11.95□□□□□ -0.5
PPP1CA-201ENST00000312989 ALG8Q9BVK2 526 aa11.95□□□□□ -0.5
PPP1CA-201ENST00000312989 JAM3Q9BX67 310 aa11.95□□□□□ -0.5
PPP1CA-201ENST00000312989 PLEKHA1Q9HB21 404 aa11.95□□□□□ -0.5
PPP1CA-201ENST00000312989 NOX4Q9NPH5 578 aa11.95□□□□□ -0.5
PPP1CA-201ENST00000312989 SMPD3Q9NY59 655 aaPredicted RBP11.95□□□□□ -0.5
PPP1CA-201ENST00000312989 IL36RNQ9UBH0 155 aa11.95□□□□□ -0.5
PPP1CA-201ENST00000312989 POLDIP2Q9Y2S7 368 aa11.95□□□□□ -0.5
PPP1CA-201ENST00000312989 DOCK11Q5JSL3 2073 aa11.95□□□□□ -0.5
PPP1CA-201ENST00000312989 TRBV23-1A0A0A0MS06 115 aa11.94□□□□□ -0.5
PPP1CA-201ENST00000312989 IGKV1-12A0A0C4DH73 117 aa11.94□□□□□ -0.5
PPP1CA-201ENST00000312989 FAM230AA0A1W2PPH8 454 aa11.94□□□□□ -0.5
PPP1CA-201ENST00000312989 M0R1W7 72 aa11.94□□□□□ -0.5
PPP1CA-201ENST00000312989 MPZL2O60487 215 aa11.94□□□□□ -0.5
PPP1CA-201ENST00000312989 CLIC3O95833 236 aa11.94□□□□□ -0.5
PPP1CA-201ENST00000312989 IGKV1D-12P01611 117 aa11.94□□□□□ -0.5
PPP1CA-201ENST00000312989 PEX2P28328 305 aa11.94□□□□□ -0.5
PPP1CA-201ENST00000312989 FUT6P51993 359 aa11.94□□□□□ -0.5
PPP1CA-201ENST00000312989 RAB40BQ12829 278 aa11.94□□□□□ -0.5
PPP1CA-201ENST00000312989 ALKBH1Q13686 389 aaKnown RBP11.94□□□□□ -0.5
PPP1CA-201ENST00000312989 ZNF691Q5VV52 312 aa11.94□□□□□ -0.5
PPP1CA-201ENST00000312989 TMEM244Q5VVB8 128 aa11.94□□□□□ -0.5
PPP1CA-201ENST00000312989 LPCAT4Q643R3 524 aa11.94□□□□□ -0.5
PPP1CA-201ENST00000312989 LAIR2Q6ISS4 152 aa11.94□□□□□ -0.5
PPP1CA-201ENST00000312989 UTS2BQ765I0 119 aa11.94□□□□□ -0.5
PPP1CA-201ENST00000312989 TCF23Q7RTU1 214 aa11.94□□□□□ -0.5
PPP1CA-201ENST00000312989 DNAAF1Q8NEP3 725 aa11.94□□□□□ -0.5
PPP1CA-201ENST00000312989 TMEM185AQ8NFB2 350 aa11.94□□□□□ -0.5
PPP1CA-201ENST00000312989 RPS4Y2Q8TD47 263 aa11.94□□□□□ -0.5
PPP1CA-201ENST00000312989 PP6455Q8WZ26 134 aa11.94□□□□□ -0.5
PPP1CA-201ENST00000312989 H1FXQ92522 213 aaKnown RBP11.94□□□□□ -0.5
PPP1CA-201ENST00000312989 RGP1Q92546 391 aaPredicted RBP11.94□□□□□ -0.5
PPP1CA-201ENST00000312989 CHIAQ9BZP6 476 aa11.94□□□□□ -0.5
PPP1CA-201ENST00000312989 PCDHGB1Q9Y5G3 927 aa11.94□□□□□ -0.5
PPP1CA-201ENST00000312989 NBEAL1Q6ZS30 2694 aa11.94□□□□□ -0.5
PPP1CA-201ENST00000312989 J3QLW9 94 aa11.93□□□□□ -0.5
PPP1CA-201ENST00000312989 GATBO75879 557 aaKnown RBP11.93□□□□□ -0.5
PPP1CA-201ENST00000312989 ZFPL1O95159 310 aa11.93□□□□□ -0.5
PPP1CA-201ENST00000312989 BAG2O95816 211 aa11.93□□□□□ -0.5
PPP1CA-201ENST00000312989 KNG1P01042 644 aa11.93□□□□□ -0.5
PPP1CA-201ENST00000312989 ZNF19P17023 458 aa11.93□□□□□ -0.5
PPP1CA-201ENST00000312989 NDUFB7P17568 137 aa11.93□□□□□ -0.5
PPP1CA-201ENST00000312989 ATF1P18846 271 aa11.93□□□□□ -0.5
PPP1CA-201ENST00000312989 DLX6P56179 175 aa11.93□□□□□ -0.5
PPP1CA-201ENST00000312989 ACTA2P62736 377 aa11.93□□□□□ -0.5
PPP1CA-201ENST00000312989 ACTG2P63267 376 aa11.93□□□□□ -0.5
PPP1CA-201ENST00000312989 ADARB1P78563 741 aaKnown RBP11.93□□□□□ -0.5
PPP1CA-201ENST00000312989 ZNF273Q14593 569 aa11.93□□□□□ -0.5
PPP1CA-201ENST00000312989 XAF1Q6GPH4 301 aa11.93□□□□□ -0.5
PPP1CA-201ENST00000312989 C16orf87Q6PH81 154 aa11.93□□□□□ -0.5
PPP1CA-201ENST00000312989 EGFL6Q8IUX8 553 aa11.93□□□□□ -0.5
PPP1CA-201ENST00000312989 ZNF561Q8N587 486 aa11.93□□□□□ -0.5
PPP1CA-201ENST00000312989 TMEM86BQ8N661 226 aa11.93□□□□□ -0.5
PPP1CA-201ENST00000312989 SLAMF9Q96A28 289 aa11.93□□□□□ -0.5
PPP1CA-201ENST00000312989 SLC25A28Q96A46 364 aa11.93□□□□□ -0.5
PPP1CA-201ENST00000312989 FGGYQ96C11 551 aa11.93□□□□□ -0.5
PPP1CA-201ENST00000312989 FGF20Q9NP95 211 aaPredicted RBP11.93□□□□□ -0.5
PPP1CA-201ENST00000312989 INPP5EQ9NRR6 644 aa11.93□□□□□ -0.5
PPP1CA-201ENST00000312989 TMEM82A0PJX8 343 aa11.92□□□□□ -0.5
PPP1CA-201ENST00000312989 MEGF11A6BM72 1044 aa11.92□□□□□ -0.5
PPP1CA-201ENST00000312989 NXPH2O95156 264 aa11.92□□□□□ -0.5
PPP1CA-201ENST00000312989 IGHV4-59P01825 116 aa11.92□□□□□ -0.5
PPP1CA-201ENST00000312989 MT-ND2P03891 347 aa11.92□□□□□ -0.5
PPP1CA-201ENST00000312989 TK1P04183 234 aa11.92□□□□□ -0.5
PPP1CA-201ENST00000312989 HTR1AP08908 422 aa11.92□□□□□ -0.5
PPP1CA-201ENST00000312989 AZGP1P25311 298 aaKnown RBP11.92□□□□□ -0.5
PPP1CA-201ENST00000312989 IER3P46695 156 aa11.92□□□□□ -0.5
PPP1CA-201ENST00000312989 NPBWR2P48146 333 aa11.92□□□□□ -0.5
PPP1CA-201ENST00000312989 ERVFRD-1P60508 538 aa11.92□□□□□ -0.5
PPP1CA-201ENST00000312989 DOC2BQ14184 412 aa11.92□□□□□ -0.5
PPP1CA-201ENST00000312989 TMEM200BQ69YZ2 307 aa11.92□□□□□ -0.5
PPP1CA-201ENST00000312989 SLC25A26Q70HW3 274 aa11.92□□□□□ -0.5
PPP1CA-201ENST00000312989 CNIH3Q8TBE1 160 aa11.92□□□□□ -0.5
PPP1CA-201ENST00000312989 C17orf50Q8WW18 174 aa11.92□□□□□ -0.5
PPP1CA-201ENST00000312989 CEP19Q96LK0 163 aa11.92□□□□□ -0.5
PPP1CA-201ENST00000312989 Q96MT0 163 aa11.92□□□□□ -0.5
PPP1CA-201ENST00000312989 SEBOXQ9HB31 216 aaPredicted RBP11.92□□□□□ -0.5
PPP1CA-201ENST00000312989 ZNRD1Q9P1U0 126 aa11.92□□□□□ -0.5
PPP1CA-201ENST00000312989 HHLA2Q9UM44 414 aa11.92□□□□□ -0.5
PPP1CA-201ENST00000312989 SLC7A11Q9UPY5 501 aa11.92□□□□□ -0.5
PPP1CA-201ENST00000312989 FAM181BA6NEQ2 426 aa11.92□□□□□ -0.5
PPP1CA-201ENST00000312989 SNTNA6NMZ2 147 aa11.92□□□□□ -0.5
PPP1CA-201ENST00000312989 K7N7A8 449 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms