RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 TMIGD2Q96BF3 282 aa9.96□□□□□ -0.81
SCFD1-201ENST00000311943 BORCS8Q96FH0 119 aa9.96□□□□□ -0.81
SCFD1-201ENST00000311943 NRIP2Q9BQI9 281 aa9.96□□□□□ -0.81
SCFD1-201ENST00000311943 TMEM160Q9NX00 188 aa9.96□□□□□ -0.81
SCFD1-201ENST00000311943 EXOSC1Q9Y3B2 195 aaKnown RBP9.96□□□□□ -0.81
SCFD1-201ENST00000311943 TRAV8-7A0A075B6U6 113 aa9.95□□□□□ -0.82
SCFD1-201ENST00000311943 J3QT63 122 aa9.95□□□□□ -0.82
SCFD1-201ENST00000311943 IFNL4K9M1U5 179 aa9.95□□□□□ -0.82
SCFD1-201ENST00000311943 PIN1P1O15428 100 aa9.95□□□□□ -0.82
SCFD1-201ENST00000311943 RPSAP08865 295 aaKnown RBP9.95□□□□□ -0.82
SCFD1-201ENST00000311943 PIPP12273 146 aaPredicted RBP9.95□□□□□ -0.82
SCFD1-201ENST00000311943 CELP19835 753 aa9.95□□□□□ -0.82
SCFD1-201ENST00000311943 TGM4P49221 684 aa9.95□□□□□ -0.82
SCFD1-201ENST00000311943 FGF12P61328 243 aa9.95□□□□□ -0.82
SCFD1-201ENST00000311943 SLC35A2P78381 396 aa9.95□□□□□ -0.82
SCFD1-201ENST00000311943 TPRX1Q8N7U7 411 aa9.95□□□□□ -0.82
SCFD1-201ENST00000311943 OR4M1Q8NGD0 313 aa9.95□□□□□ -0.82
SCFD1-201ENST00000311943 H1FXQ92522 213 aaKnown RBP9.95□□□□□ -0.82
SCFD1-201ENST00000311943 OR14A2Q96R54 314 aa9.95□□□□□ -0.82
SCFD1-201ENST00000311943 NUDT16L1Q9BRJ7 211 aaKnown RBP9.95□□□□□ -0.82
SCFD1-201ENST00000311943 PCGF1Q9BSM1 259 aa9.95□□□□□ -0.82
SCFD1-201ENST00000311943 PPIL3Q9H2H8 161 aaKnown RBP9.95□□□□□ -0.82
SCFD1-201ENST00000311943 OCEL1Q9H607 264 aa9.95□□□□□ -0.82
SCFD1-201ENST00000311943 DHDHQ9UQ10 334 aa9.95□□□□□ -0.82
SCFD1-201ENST00000311943 LRCH1Q9Y2L9 728 aa9.95□□□□□ -0.82
SCFD1-201ENST00000311943 AUP1Q9Y679 476 aa9.95□□□□□ -0.82
SCFD1-201ENST00000311943 A0A1W2PRD5 423 aa9.95□□□□□ -0.82
SCFD1-201ENST00000311943 A0A1W2PRF3 423 aa9.95□□□□□ -0.82
SCFD1-201ENST00000311943 A0A1W2PRM7 423 aa9.95□□□□□ -0.82
SCFD1-201ENST00000311943 EFCAB10A6NFE3 127 aa9.95□□□□□ -0.82
SCFD1-201ENST00000311943 TMEM212A6NML5 194 aa9.95□□□□□ -0.82
SCFD1-201ENST00000311943 MUC1P15941 1255 aaPredicted RBP9.95□□□□□ -0.82
SCFD1-201ENST00000311943 MPZP25189 248 aa9.95□□□□□ -0.82
SCFD1-201ENST00000311943 PAX6P26367 422 aa9.95□□□□□ -0.82
SCFD1-201ENST00000311943 PAX8Q06710 450 aa9.95□□□□□ -0.82
SCFD1-201ENST00000311943 MZT1Q08AG7 82 aa9.95□□□□□ -0.82
SCFD1-201ENST00000311943 RPL22L1Q6P5R6 122 aaKnown RBP9.95□□□□□ -0.82
SCFD1-201ENST00000311943 NLRC3Q7RTR2 1065 aa9.95□□□□□ -0.82
SCFD1-201ENST00000311943 ZNF573Q86YE8 665 aa9.95□□□□□ -0.82
SCFD1-201ENST00000311943 PNKDQ8N490 385 aa9.95□□□□□ -0.82
SCFD1-201ENST00000311943 OR10K1Q8NGX5 313 aa9.95□□□□□ -0.82
SCFD1-201ENST00000311943 TMEM106AQ96A25 262 aa9.95□□□□□ -0.82
SCFD1-201ENST00000311943 CNOT2Q9NZN8 540 aaKnown RBP9.95□□□□□ -0.82
SCFD1-201ENST00000311943 ZNF69Q9UC07 566 aa9.95□□□□□ -0.82
SCFD1-201ENST00000311943 OR5V1Q9UGF6 321 aa9.95□□□□□ -0.82
SCFD1-201ENST00000311943 LSM2Q9Y333 95 aaKnown RBP9.95□□□□□ -0.82
SCFD1-201ENST00000311943 TRAV40A0A0B4J280 105 aa9.94□□□□□ -0.82
SCFD1-201ENST00000311943 KIR2DS1A0A191URI9 304 aa9.94□□□□□ -0.82
SCFD1-201ENST00000311943 DHRS7CA6NNS2 312 aa9.94□□□□□ -0.82
SCFD1-201ENST00000311943 H0YJX3 145 aa9.94□□□□□ -0.82
SCFD1-201ENST00000311943 NXPH2O95156 264 aa9.94□□□□□ -0.82
SCFD1-201ENST00000311943 OCM2P0CE71 109 aa9.94□□□□□ -0.82
SCFD1-201ENST00000311943 CRHBPP24387 322 aa9.94□□□□□ -0.82
SCFD1-201ENST00000311943 FUT6P51993 359 aa9.94□□□□□ -0.82
SCFD1-201ENST00000311943 GP2P55259 537 aaKnown RBP9.94□□□□□ -0.82
SCFD1-201ENST00000311943 TMPRSS11AQ6ZMR5 421 aa9.94□□□□□ -0.82
SCFD1-201ENST00000311943 TMEM185AQ8NFB2 350 aa9.94□□□□□ -0.82
SCFD1-201ENST00000311943 OR10Z1Q8NGY1 313 aa9.94□□□□□ -0.82
SCFD1-201ENST00000311943 OR52N1Q8NH53 320 aa9.94□□□□□ -0.82
SCFD1-201ENST00000311943 SMIM19Q96E16 107 aa9.94□□□□□ -0.82
SCFD1-201ENST00000311943 ZNF48Q96MX3 618 aaPredicted RBP9.94□□□□□ -0.82
SCFD1-201ENST00000311943 OPALINQ96PE5 141 aa9.94□□□□□ -0.82
SCFD1-201ENST00000311943 TBX15Q96SF7 602 aa9.94□□□□□ -0.82
SCFD1-201ENST00000311943 SLC6A7Q99884 636 aa9.94□□□□□ -0.82
SCFD1-201ENST00000311943 CCDC90BQ9GZT6 254 aa9.94□□□□□ -0.82
SCFD1-201ENST00000311943 COMMD4Q9H0A8 199 aa9.94□□□□□ -0.82
SCFD1-201ENST00000311943 ZCCHC4Q9H5U6 513 aa9.94□□□□□ -0.82
SCFD1-201ENST00000311943 C19orf12Q9NSK7 152 aa9.94□□□□□ -0.82
SCFD1-201ENST00000311943 SLC7A11Q9UPY5 501 aa9.94□□□□□ -0.82
SCFD1-201ENST00000311943 POLR3KQ9Y2Y1 108 aaPredicted RBP9.94□□□□□ -0.82
SCFD1-201ENST00000311943 A0A1W2PP11 408 aa9.94□□□□□ -0.82
SCFD1-201ENST00000311943 VENTXO95231 258 aa9.94□□□□□ -0.82
SCFD1-201ENST00000311943 FSTL3O95633 263 aa9.94□□□□□ -0.82
SCFD1-201ENST00000311943 FSHBP01225 129 aa9.94□□□□□ -0.82
SCFD1-201ENST00000311943 NDUFB7P17568 137 aa9.94□□□□□ -0.82
SCFD1-201ENST00000311943 PRDX2P32119 198 aa9.94□□□□□ -0.82
SCFD1-201ENST00000311943 VHLP40337 213 aa9.94□□□□□ -0.82
SCFD1-201ENST00000311943 RBP2P50120 134 aa9.94□□□□□ -0.82
SCFD1-201ENST00000311943 WNT4P56705 351 aa9.94□□□□□ -0.82
SCFD1-201ENST00000311943 KLRD1Q13241 179 aa9.94□□□□□ -0.82
SCFD1-201ENST00000311943 IRF3Q14653 427 aa9.94□□□□□ -0.82
SCFD1-201ENST00000311943 MED22Q15528 200 aa9.94□□□□□ -0.82
SCFD1-201ENST00000311943 SATL1Q86VE3 508 aa9.94□□□□□ -0.82
SCFD1-201ENST00000311943 PARP16Q8N5Y8 322 aa9.94□□□□□ -0.82
SCFD1-201ENST00000311943 DNAAF1Q8NEP3 725 aa9.94□□□□□ -0.82
SCFD1-201ENST00000311943 ZNF671Q8TAW3 534 aa9.94□□□□□ -0.82
SCFD1-201ENST00000311943 PP6455Q8WZ26 134 aa9.94□□□□□ -0.82
SCFD1-201ENST00000311943 TMEM203Q969S6 136 aa9.94□□□□□ -0.82
SCFD1-201ENST00000311943 CHST6Q9GZX3 395 aa9.94□□□□□ -0.82
SCFD1-201ENST00000311943 DUSP21Q9H596 190 aa9.94□□□□□ -0.82
SCFD1-201ENST00000311943 HES4Q9HCC6 221 aa9.94□□□□□ -0.82
SCFD1-201ENST00000311943 SIRT7Q9NRC8 400 aa9.94□□□□□ -0.82
SCFD1-201ENST00000311943 ING3Q9NXR8 418 aa9.94□□□□□ -0.82
SCFD1-201ENST00000311943 KAAG1Q9UBP8 84 aa9.94□□□□□ -0.82
SCFD1-201ENST00000311943 RPUSD1Q9UJJ7 312 aaKnown RBP9.94□□□□□ -0.82
SCFD1-201ENST00000311943 MYL12BO14950 172 aa9.93□□□□□ -0.82
SCFD1-201ENST00000311943 PSPNO60542 156 aa9.93□□□□□ -0.82
SCFD1-201ENST00000311943 CDRT1O95170 752 aa9.93□□□□□ -0.82
SCFD1-201ENST00000311943 HCKP08631 526 aa9.93□□□□□ -0.82
SCFD1-201ENST00000311943 ACAA1P09110 424 aaPredicted RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms