RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 FNDC9Q8TBE3 224 aa22.04■■□□□ 1.12
HOXB3-201ENST00000311626 ADAMTS17Q8TE56 1095 aa22.04■■□□□ 1.12
HOXB3-201ENST00000311626 CMSS1Q9BQ75 279 aaKnown RBP22.04■■□□□ 1.12
HOXB3-201ENST00000311626 RHOFQ9HBH0 211 aa22.04■■□□□ 1.12
HOXB3-201ENST00000311626 UQCC1Q9NVA1 299 aa22.04■■□□□ 1.12
HOXB3-201ENST00000311626 SYNGR3O43761 229 aa22.03■■□□□ 1.12
HOXB3-201ENST00000311626 VAMP5O95183 116 aa22.03■■□□□ 1.12
HOXB3-201ENST00000311626 CRYGSP22914 178 aa22.03■■□□□ 1.12
HOXB3-201ENST00000311626 RPL12P30050 165 aaKnown RBP22.03■■□□□ 1.12
HOXB3-201ENST00000311626 SUCLG1P53597 346 aaKnown RBP22.03■■□□□ 1.12
HOXB3-201ENST00000311626 PIGPP57054 158 aa22.03■■□□□ 1.12
HOXB3-201ENST00000311626 RAC1P63000 192 aa22.03■■□□□ 1.12
HOXB3-201ENST00000311626 AGBL5Q8NDL9 886 aa22.03■■□□□ 1.12
HOXB3-201ENST00000311626 SHANK1Q9Y566 2161 aa22.03■■□□□ 1.12
HOXB3-201ENST00000311626 TRAPPC6AO75865 159 aa22.03■■□□□ 1.12
HOXB3-201ENST00000311626 FCGR2CP31995 323 aa22.03■■□□□ 1.12
HOXB3-201ENST00000311626 HTR5AP47898 357 aa22.03■■□□□ 1.12
HOXB3-201ENST00000311626 PJVKQ0ZLH3 352 aa22.03■■□□□ 1.12
HOXB3-201ENST00000311626 NAT6Q93015 286 aa22.03■■□□□ 1.12
HOXB3-201ENST00000311626 FBXL17Q9UF56 701 aa22.03■■□□□ 1.12
HOXB3-201ENST00000311626 C9J4A7 227 aa22.02■■□□□ 1.12
HOXB3-201ENST00000311626 DIRAS3O95661 229 aa22.02■■□□□ 1.12
HOXB3-201ENST00000311626 PDGFBP01127 241 aaPredicted RBP22.02■■□□□ 1.12
HOXB3-201ENST00000311626 RGS19P49795 217 aa22.02■■□□□ 1.12
HOXB3-201ENST00000311626 IL11RAQ14626 422 aa22.02■■□□□ 1.12
HOXB3-201ENST00000311626 OR1F12Q8NHA8 337 aa22.02■■□□□ 1.12
HOXB3-201ENST00000311626 OTX2P32243 289 aa22.02■■□□□ 1.12
HOXB3-201ENST00000311626 ZNF133P52736 654 aaPredicted RBP22.02■■□□□ 1.12
HOXB3-201ENST00000311626 MRPS34P82930 218 aaKnown RBP22.02■■□□□ 1.12
HOXB3-201ENST00000311626 STK11Q15831 433 aa22.02■■□□□ 1.12
HOXB3-201ENST00000311626 EXT1Q16394 746 aa22.02■■□□□ 1.12
HOXB3-201ENST00000311626 WIPI1Q5MNZ9 446 aaPredicted RBP22.02■■□□□ 1.12
HOXB3-201ENST00000311626 ERGIC1Q969X5 290 aa22.02■■□□□ 1.12
HOXB3-201ENST00000311626 SH2D2AQ9NP31 389 aa22.02■■□□□ 1.12
HOXB3-201ENST00000311626 C9JQL5 133 aa22.01■■□□□ 1.11
HOXB3-201ENST00000311626 K7EPK0 472 aa22.01■■□□□ 1.11
HOXB3-201ENST00000311626 CARD18P57730 90 aa22.01■■□□□ 1.11
HOXB3-201ENST00000311626 MLF1P58340 268 aa22.01■■□□□ 1.11
HOXB3-201ENST00000311626 FBXL14Q8N1E6 418 aa22.01■■□□□ 1.11
HOXB3-201ENST00000311626 FAM71E2Q8N5Q1 922 aa22.01■■□□□ 1.11
HOXB3-201ENST00000311626 CRYM-AS1A6NIL9 109 aa22.01■■□□□ 1.11
HOXB3-201ENST00000311626 PCP4L1A6NKN8 68 aa22.01■■□□□ 1.11
HOXB3-201ENST00000311626 XRCC2O43543 280 aa22.01■■□□□ 1.11
HOXB3-201ENST00000311626 CBR3O75828 277 aa22.01■■□□□ 1.11
HOXB3-201ENST00000311626 OR5AC1P0C628 307 aa22.01■■□□□ 1.11
HOXB3-201ENST00000311626 B3GALT5-AS1P59052 145 aa22.01■■□□□ 1.11
HOXB3-201ENST00000311626 PMS2CLQ68D20 193 aa22.01■■□□□ 1.11
HOXB3-201ENST00000311626 OR11L1Q8NGX0 322 aa22.01■■□□□ 1.11
HOXB3-201ENST00000311626 BORCS8Q96FH0 119 aa22.01■■□□□ 1.11
HOXB3-201ENST00000311626 MEMO1Q9Y316 297 aa22.01■■□□□ 1.11
HOXB3-201ENST00000311626 PET100P0DJ07 73 aa22■■□□□ 1.11
HOXB3-201ENST00000311626 TMEM33P57088 247 aa22■■□□□ 1.11
HOXB3-201ENST00000311626 SLC23A3Q6PIS1 610 aa22■■□□□ 1.11
HOXB3-201ENST00000311626 OR5L1Q8NGL2 311 aa22■■□□□ 1.11
HOXB3-201ENST00000311626 CTSDP07339 412 aaPredicted RBP22■■□□□ 1.11
HOXB3-201ENST00000311626 FCGR3AP08637 254 aa22■■□□□ 1.11
HOXB3-201ENST00000311626 SPINK2P20155 84 aa22■■□□□ 1.11
HOXB3-201ENST00000311626 PSG4Q00888 419 aa22■■□□□ 1.11
HOXB3-201ENST00000311626 RAB35Q15286 201 aa22■■□□□ 1.11
HOXB3-201ENST00000311626 SLC22A25Q6T423 547 aa22■■□□□ 1.11
HOXB3-201ENST00000311626 AAED1Q7RTV5 226 aa22■■□□□ 1.11
HOXB3-201ENST00000311626 LYZL2Q7Z4W2 148 aa22■■□□□ 1.11
HOXB3-201ENST00000311626 OR10AD1Q8NGE0 317 aa22■■□□□ 1.11
HOXB3-201ENST00000311626 OR2Y1Q8NGV0 311 aa22■■□□□ 1.11
HOXB3-201ENST00000311626 PIGCQ92535 297 aa22■■□□□ 1.11
HOXB3-201ENST00000311626 DNAJB11Q9UBS4 358 aa22■■□□□ 1.11
HOXB3-201ENST00000311626 MED19A0JLT2 244 aaPredicted RBP21.99■■□□□ 1.11
HOXB3-201ENST00000311626 ZNF92Q03936 586 aa21.99■■□□□ 1.11
HOXB3-201ENST00000311626 CEACAM16Q2WEN9 425 aa21.99■■□□□ 1.11
HOXB3-201ENST00000311626 C9orf135Q5VTT2 229 aa21.99■■□□□ 1.11
HOXB3-201ENST00000311626 M1APQ8TC57 530 aa21.99■■□□□ 1.11
HOXB3-201ENST00000311626 ZNF845Q96IR2 970 aaPredicted RBP21.99■■□□□ 1.11
HOXB3-201ENST00000311626 SMOC1Q9H4F8 434 aa21.99■■□□□ 1.11
HOXB3-201ENST00000311626 TMEM38BQ9NVV0 291 aa21.99■■□□□ 1.11
HOXB3-201ENST00000311626 NRASP01111 189 aa21.99■■□□□ 1.11
HOXB3-201ENST00000311626 Q0VFX4 171 aa21.99■■□□□ 1.11
HOXB3-201ENST00000311626 ETV3LQ6ZN32 361 aa21.99■■□□□ 1.11
HOXB3-201ENST00000311626 ZNF587BE7ETH6 402 aa21.98■■□□□ 1.11
HOXB3-201ENST00000311626 ZNF728P0DKX0 622 aa21.98■■□□□ 1.11
HOXB3-201ENST00000311626 PVALBP20472 110 aaPredicted RBP21.98■■□□□ 1.11
HOXB3-201ENST00000311626 RBP2P50120 134 aa21.98■■□□□ 1.11
HOXB3-201ENST00000311626 SURF2Q15527 256 aaPredicted RBP21.98■■□□□ 1.11
HOXB3-201ENST00000311626 GGNQ86UU5 652 aa21.98■■□□□ 1.11
HOXB3-201ENST00000311626 PRRX2Q99811 253 aa21.98■■□□□ 1.11
HOXB3-201ENST00000311626 NRIP2Q9BQI9 281 aa21.98■■□□□ 1.11
HOXB3-201ENST00000311626 FRYQ5TBA9 3013 aa21.98■■□□□ 1.11
HOXB3-201ENST00000311626 DEDDO75618 318 aa21.98■■□□□ 1.11
HOXB3-201ENST00000311626 CD80P33681 288 aa21.98■■□□□ 1.11
HOXB3-201ENST00000311626 RFC3P40938 356 aa21.98■■□□□ 1.11
HOXB3-201ENST00000311626 HFEQ30201 348 aa21.98■■□□□ 1.11
HOXB3-201ENST00000311626 GPR137CQ8N3F9 429 aa21.98■■□□□ 1.11
HOXB3-201ENST00000311626 SMIM8Q96KF7 97 aa21.98■■□□□ 1.11
HOXB3-201ENST00000311626 AMDHD2Q9Y303 409 aa21.98■■□□□ 1.11
HOXB3-201ENST00000311626 KIAA1549Q9HCM3 1950 aa21.98■■□□□ 1.11
HOXB3-201ENST00000311626 H7C2Y5 167 aa21.97■■□□□ 1.11
HOXB3-201ENST00000311626 IFNA21P01568 189 aa21.97■■□□□ 1.11
HOXB3-201ENST00000311626 IL32P24001 234 aa21.97■■□□□ 1.11
HOXB3-201ENST00000311626 CHATP28329 748 aa21.97■■□□□ 1.11
HOXB3-201ENST00000311626 AKR1C3P42330 323 aa21.97■■□□□ 1.11
HOXB3-201ENST00000311626 RAC3P60763 192 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms