RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 TRAPPC4Q9Y296 219 aa13.91□□□□□ -0.18
HCFC1-201ENST00000310441 CDC34P49427 236 aaPredicted RBP13.9□□□□□ -0.18
HCFC1-201ENST00000310441 PRDX4Q13162 271 aa13.9□□□□□ -0.18
HCFC1-201ENST00000310441 FAHD1Q6P587 224 aa13.9□□□□□ -0.18
HCFC1-201ENST00000310441 IL21Q9HBE4 155 aa13.9□□□□□ -0.18
HCFC1-201ENST00000310441 HLA-GP17693 338 aa13.9□□□□□ -0.18
HCFC1-201ENST00000310441 PYCR3Q53H96 274 aa13.9□□□□□ -0.18
HCFC1-201ENST00000310441 OR6S1Q8NH40 331 aa13.9□□□□□ -0.18
HCFC1-201ENST00000310441 EXTL1Q92935 676 aa13.9□□□□□ -0.18
HCFC1-201ENST00000310441 C10orf35Q96D05 121 aa13.9□□□□□ -0.18
HCFC1-201ENST00000310441 NAGKQ9UJ70 344 aa13.9□□□□□ -0.18
HCFC1-201ENST00000310441 BOLA1Q9Y3E2 137 aa13.9□□□□□ -0.18
HCFC1-201ENST00000310441 RAB9AP51151 201 aa13.9□□□□□ -0.18
HCFC1-201ENST00000310441 PTCRAQ6ISU1 281 aaPredicted RBP13.9□□□□□ -0.18
HCFC1-201ENST00000310441 BTLAQ7Z6A9 289 aa13.9□□□□□ -0.18
HCFC1-201ENST00000310441 CRXO43186 299 aaPredicted RBP13.9□□□□□ -0.18
HCFC1-201ENST00000310441 NKAIN4Q8IVV8 208 aa13.9□□□□□ -0.18
HCFC1-201ENST00000310441 TP53RKQ96S44 253 aa13.9□□□□□ -0.18
HCFC1-201ENST00000310441 A0A1W2PR48 441 aa13.9□□□□□ -0.18
HCFC1-201ENST00000310441 SMIM18P0DKX4 95 aa13.9□□□□□ -0.18
HCFC1-201ENST00000310441 PXNP49023 591 aaPredicted RBP13.9□□□□□ -0.18
HCFC1-201ENST00000310441 OTOSQ8NHW6 89 aa13.9□□□□□ -0.18
HCFC1-201ENST00000310441 MYOZ3Q8TDC0 251 aa13.9□□□□□ -0.18
HCFC1-201ENST00000310441 RLN3Q8WXF3 142 aa13.9□□□□□ -0.18
HCFC1-201ENST00000310441 YIPF6Q96EC8 236 aa13.9□□□□□ -0.18
HCFC1-201ENST00000310441 GMLQ99445 158 aa13.9□□□□□ -0.18
HCFC1-201ENST00000310441 RAB1BQ9H0U4 201 aa13.9□□□□□ -0.18
HCFC1-201ENST00000310441 ACSM6Q6P461 480 aa13.9□□□□□ -0.18
HCFC1-201ENST00000310441 OR2T10Q8NGZ9 312 aa13.9□□□□□ -0.18
HCFC1-201ENST00000310441 ABCA3Q99758 1704 aa13.9□□□□□ -0.18
HCFC1-201ENST00000310441 hADV38S2A0JD32 116 aa13.9□□□□□ -0.19
HCFC1-201ENST00000310441 PRSS1P07477 247 aa13.9□□□□□ -0.19
HCFC1-201ENST00000310441 CEACAM6P40199 344 aa13.9□□□□□ -0.19
HCFC1-201ENST00000310441 NDUFB6O95139 128 aa13.89□□□□□ -0.19
HCFC1-201ENST00000310441 RPLP1P05386 114 aaKnown RBP13.89□□□□□ -0.19
HCFC1-201ENST00000310441 B4GALT1P15291 398 aa13.89□□□□□ -0.19
HCFC1-201ENST00000310441 NAT1P18440 290 aa13.89□□□□□ -0.19
HCFC1-201ENST00000310441 KIR2DL1P43626 348 aaPredicted RBP13.89□□□□□ -0.19
HCFC1-201ENST00000310441 KIR2DL2P43627 348 aaPredicted RBP13.89□□□□□ -0.19
HCFC1-201ENST00000310441 SLC25A33Q9BSK2 321 aa13.89□□□□□ -0.19
HCFC1-201ENST00000310441 ADAMTS5Q9UNA0 930 aa13.89□□□□□ -0.19
HCFC1-201ENST00000310441 A0A096LPE4 126 aa13.89□□□□□ -0.19
HCFC1-201ENST00000310441 A0A1W2PPZ6 126 aa13.89□□□□□ -0.19
HCFC1-201ENST00000310441 MFNGO00587 321 aa13.89□□□□□ -0.19
HCFC1-201ENST00000310441 IGHA1P01876 353 aa13.89□□□□□ -0.19
HCFC1-201ENST00000310441 IGHA2P01877 340 aa13.89□□□□□ -0.19
HCFC1-201ENST00000310441 BRS3P32247 399 aa13.89□□□□□ -0.19
HCFC1-201ENST00000310441 ASTLQ6HA08 431 aaPredicted RBP13.89□□□□□ -0.19
HCFC1-201ENST00000310441 BPIFA4PQ86YQ2 179 aa13.89□□□□□ -0.19
HCFC1-201ENST00000310441 OR2V1Q8NHB1 315 aa13.89□□□□□ -0.19
HCFC1-201ENST00000310441 DIRC2Q96SL1 478 aa13.89□□□□□ -0.19
HCFC1-201ENST00000310441 TECRQ9NZ01 308 aaKnown RBP13.89□□□□□ -0.19
HCFC1-201ENST00000310441 CORTO00230 105 aa13.89□□□□□ -0.19
HCFC1-201ENST00000310441 DCTDP32321 178 aa13.89□□□□□ -0.19
HCFC1-201ENST00000310441 OR5A2Q8NGI9 324 aa13.89□□□□□ -0.19
HCFC1-201ENST00000310441 C16orf52Q8NHV5 167 aa13.89□□□□□ -0.19
HCFC1-201ENST00000310441 A0A1W2PNV4 684 aa13.89□□□□□ -0.19
HCFC1-201ENST00000310441 MFSD2BA6NFX1 497 aa13.89□□□□□ -0.19
HCFC1-201ENST00000310441 COX6CP09669 75 aa13.89□□□□□ -0.19
HCFC1-201ENST00000310441 ZNF141Q15928 474 aa13.89□□□□□ -0.19
HCFC1-201ENST00000310441 UBALD2Q8IYN6 164 aa13.89□□□□□ -0.19
HCFC1-201ENST00000310441 OR5B21A6NL26 309 aa13.89□□□□□ -0.19
HCFC1-201ENST00000310441 M0R3E3 92 aa13.89□□□□□ -0.19
HCFC1-201ENST00000310441 CDK2AP1O14519 115 aa13.89□□□□□ -0.19
HCFC1-201ENST00000310441 GJB3O75712 270 aa13.89□□□□□ -0.19
HCFC1-201ENST00000310441 C20orf196Q8IYI0 205 aa13.89□□□□□ -0.19
HCFC1-201ENST00000310441 ZNF107Q9UII5 783 aaPredicted RBP13.89□□□□□ -0.19
HCFC1-201ENST00000310441 PARP14Q460N5 1801 aa13.89□□□□□ -0.19
HCFC1-201ENST00000310441 A0A087X0M5 115 aa13.89□□□□□ -0.19
HCFC1-201ENST00000310441 A0A1B0GX30 115 aa13.89□□□□□ -0.19
HCFC1-201ENST00000310441 SLC19A1P41440 591 aa13.89□□□□□ -0.19
HCFC1-201ENST00000310441 ASCL1P50553 236 aa13.89□□□□□ -0.19
HCFC1-201ENST00000310441 PMP22Q01453 160 aa13.89□□□□□ -0.19
HCFC1-201ENST00000310441 OR2Z1Q8NG97 314 aa13.89□□□□□ -0.19
HCFC1-201ENST00000310441 TMEM37Q8WXS4 190 aa13.89□□□□□ -0.19
HCFC1-201ENST00000310441 LPAR3Q9UBY5 353 aa13.89□□□□□ -0.19
HCFC1-201ENST00000310441 ZNF260Q3ZCT1 412 aa13.88□□□□□ -0.19
HCFC1-201ENST00000310441 OR10A7Q8NGE5 316 aa13.88□□□□□ -0.19
HCFC1-201ENST00000310441 LBX1P52954 281 aa13.88□□□□□ -0.19
HCFC1-201ENST00000310441 RPL24P83731 157 aaKnown RBP13.88□□□□□ -0.19
HCFC1-201ENST00000310441 C19orf57Q0VDD7 668 aa13.88□□□□□ -0.19
HCFC1-201ENST00000310441 DEGS2Q6QHC5 323 aa13.88□□□□□ -0.19
HCFC1-201ENST00000310441 AKIP1Q9NQ31 210 aa13.88□□□□□ -0.19
HCFC1-201ENST00000310441 MASP2O00187 686 aa13.88□□□□□ -0.19
HCFC1-201ENST00000310441 INHBBP09529 407 aa13.88□□□□□ -0.19
HCFC1-201ENST00000310441 TMEM215Q68D42 235 aa13.88□□□□□ -0.19
HCFC1-201ENST00000310441 MUC15Q8N387 334 aa13.88□□□□□ -0.19
HCFC1-201ENST00000310441 GPR87Q9BY21 358 aa13.88□□□□□ -0.19
HCFC1-201ENST00000310441 NAA60Q9H7X0 242 aa13.88□□□□□ -0.19
HCFC1-201ENST00000310441 C1RLQ9NZP8 487 aa13.88□□□□□ -0.19
HCFC1-201ENST00000310441 TMEM267Q0VDI3 215 aaPredicted RBP13.88□□□□□ -0.19
HCFC1-201ENST00000310441 PRSS42Q7Z5A4 293 aa13.88□□□□□ -0.19
HCFC1-201ENST00000310441 PTGFRP43088 359 aa13.88□□□□□ -0.19
HCFC1-201ENST00000310441 COL25A1Q9BXS0 654 aaPredicted RBP13.88□□□□□ -0.19
HCFC1-201ENST00000310441 SMDT1Q9H4I9 107 aa13.88□□□□□ -0.19
HCFC1-201ENST00000310441 K7ESF4 209 aa13.88□□□□□ -0.19
HCFC1-201ENST00000310441 SURF2Q15527 256 aaPredicted RBP13.88□□□□□ -0.19
HCFC1-201ENST00000310441 OR52B4Q8NGK2 314 aa13.88□□□□□ -0.19
HCFC1-201ENST00000310441 FGF14Q92915 247 aa13.88□□□□□ -0.19
HCFC1-201ENST00000310441 AMDHD2Q9Y303 409 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 779.7 ms