RNA–Protein interactions for RNA: ENST00000309033.4

UBXN2A-201, Transcript of UBX domain protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN2A, Length 6,066 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2A-201ENST00000309033 RPS4XP62701 263 aaKnown RBP16.5■□□□□ 0.23
UBXN2A-201ENST00000309033 SIGLECL1Q8N7X8 197 aa16.5■□□□□ 0.23
UBXN2A-201ENST00000309033 ZNF251Q9BRH9 671 aa16.5■□□□□ 0.23
UBXN2A-201ENST00000309033 NDFIP1Q9BT67 221 aa16.5■□□□□ 0.23
UBXN2A-201ENST00000309033 SMCHD1A6NHR9 2005 aa16.49■□□□□ 0.23
UBXN2A-201ENST00000309033 A0A1W2PPV9 198 aa16.49■□□□□ 0.23
UBXN2A-201ENST00000309033 RBP4P02753 201 aa16.49■□□□□ 0.23
UBXN2A-201ENST00000309033 RHBDD2Q6NTF9 364 aa16.49■□□□□ 0.23
UBXN2A-201ENST00000309033 Q7L0L9 218 aa16.49■□□□□ 0.23
UBXN2A-201ENST00000309033 LRRC29Q8WV35 223 aa16.49■□□□□ 0.23
UBXN2A-201ENST00000309033 CCL27Q9Y4X3 112 aa16.49■□□□□ 0.23
UBXN2A-201ENST00000309033 ARL2-SNX15V9GYD0 113 aa16.49■□□□□ 0.23
UBXN2A-201ENST00000309033 C3orf80F5H4A9 247 aa16.49■□□□□ 0.23
UBXN2A-201ENST00000309033 CCL4P13236 92 aa16.49■□□□□ 0.23
UBXN2A-201ENST00000309033 SPRED2Q7Z698 418 aa16.49■□□□□ 0.23
UBXN2A-201ENST00000309033 CCL17Q92583 94 aa16.49■□□□□ 0.23
UBXN2A-201ENST00000309033 PPP1CBP62140 327 aa16.49■□□□□ 0.23
UBXN2A-201ENST00000309033 VSTM2LQ96N03 204 aa16.49■□□□□ 0.23
UBXN2A-201ENST00000309033 RBM38Q9H0Z9 239 aaKnown RBP16.49■□□□□ 0.23
UBXN2A-201ENST00000309033 OR2D2Q9H210 308 aa16.49■□□□□ 0.23
UBXN2A-201ENST00000309033 ACSM4P0C7M7 580 aa16.49■□□□□ 0.23
UBXN2A-201ENST00000309033 SRD5A2P31213 254 aa16.49■□□□□ 0.23
UBXN2A-201ENST00000309033 HLXQ14774 488 aaPredicted RBP16.49■□□□□ 0.23
UBXN2A-201ENST00000309033 DBX1A6NMT0 343 aa16.49■□□□□ 0.23
UBXN2A-201ENST00000309033 OR5AC1P0C628 307 aa16.49■□□□□ 0.23
UBXN2A-201ENST00000309033 EIF3IQ13347 325 aaKnown RBP16.49■□□□□ 0.23
UBXN2A-201ENST00000309033 ZNRF4Q8WWF5 429 aa16.49■□□□□ 0.23
UBXN2A-201ENST00000309033 MISP3Q96FF7 219 aa16.49■□□□□ 0.23
UBXN2A-201ENST00000309033 TRIP6Q15654 476 aaKnown RBP16.48■□□□□ 0.23
UBXN2A-201ENST00000309033 FFAR4Q5NUL3 377 aa16.48■□□□□ 0.23
UBXN2A-201ENST00000309033 MRM1Q6IN84 353 aaKnown RBP16.48■□□□□ 0.23
UBXN2A-201ENST00000309033 ZNF429Q86V71 674 aa16.48■□□□□ 0.23
UBXN2A-201ENST00000309033 RASL10BQ96S79 203 aa16.48■□□□□ 0.23
UBXN2A-201ENST00000309033 FRRS1LQ9P0K9 344 aa16.48■□□□□ 0.23
UBXN2A-201ENST00000309033 MRGPRDQ8TDS7 321 aa16.48■□□□□ 0.23
UBXN2A-201ENST00000309033 ZNF71Q9NQZ8 489 aaPredicted RBP16.48■□□□□ 0.23
UBXN2A-201ENST00000309033 FAM24AA6NFZ4 105 aa16.48■□□□□ 0.23
UBXN2A-201ENST00000309033 LSM11P83369 360 aaKnown RBP eCLIP16.48■□□□□ 0.23
UBXN2A-201ENST00000309033 GGNBP1Q5YKI7 109 aa16.48■□□□□ 0.23
UBXN2A-201ENST00000309033 ATG4DQ86TL0 474 aaPredicted RBP16.48■□□□□ 0.23
UBXN2A-201ENST00000309033 RAB18Q9NP72 206 aa16.48■□□□□ 0.23
UBXN2A-201ENST00000309033 CD300CQ08708 224 aa16.48■□□□□ 0.23
UBXN2A-201ENST00000309033 BTNL3Q6UXE8 466 aa16.48■□□□□ 0.23
UBXN2A-201ENST00000309033 FAM122AQ96E09 287 aa16.48■□□□□ 0.23
UBXN2A-201ENST00000309033 ERVFC1-1P60608 527 aa16.48■□□□□ 0.23
UBXN2A-201ENST00000309033 DMKNQ6E0U4 476 aaPredicted RBP16.48■□□□□ 0.23
UBXN2A-201ENST00000309033 DEGS2Q6QHC5 323 aa16.48■□□□□ 0.23
UBXN2A-201ENST00000309033 ZNF574Q6ZN55 896 aaPredicted RBP16.48■□□□□ 0.23
UBXN2A-201ENST00000309033 OR5C1Q8NGR4 320 aa16.48■□□□□ 0.23
UBXN2A-201ENST00000309033 PECRQ9BY49 303 aa16.48■□□□□ 0.23
UBXN2A-201ENST00000309033 FCER1GP30273 86 aa16.47■□□□□ 0.23
UBXN2A-201ENST00000309033 GUK1Q16774 197 aa16.47■□□□□ 0.23
UBXN2A-201ENST00000309033 CLEC9AQ6UXN8 241 aa16.47■□□□□ 0.23
UBXN2A-201ENST00000309033 ICAM5Q9UMF0 924 aa16.47■□□□□ 0.23
UBXN2A-201ENST00000309033 SOX8P57073 446 aa16.47■□□□□ 0.23
UBXN2A-201ENST00000309033 VMA21Q3ZAQ7 101 aa16.47■□□□□ 0.23
UBXN2A-201ENST00000309033 ZDHHC11Q9H8X9 412 aa16.47■□□□□ 0.23
UBXN2A-201ENST00000309033 HES4Q9HCC6 221 aa16.47■□□□□ 0.23
UBXN2A-201ENST00000309033 TREM2Q9NZC2 230 aa16.47■□□□□ 0.23
UBXN2A-201ENST00000309033 C1QCP02747 245 aa16.47■□□□□ 0.23
UBXN2A-201ENST00000309033 OPN1MWP04001 364 aa16.47■□□□□ 0.23
UBXN2A-201ENST00000309033 OPN1MW2P0DN77 364 aa16.47■□□□□ 0.23
UBXN2A-201ENST00000309033 OPN1MW3P0DN78 364 aa16.47■□□□□ 0.23
UBXN2A-201ENST00000309033 NPEPL1Q8NDH3 523 aa16.47■□□□□ 0.23
UBXN2A-201ENST00000309033 TM4SF19Q96DZ7 209 aa16.47■□□□□ 0.23
UBXN2A-201ENST00000309033 ANKRD20A5PA0PJZ0 165 aa16.47■□□□□ 0.23
UBXN2A-201ENST00000309033 C1orf53Q5VUE5 145 aa16.47■□□□□ 0.23
UBXN2A-201ENST00000309033 SFTPA2Q8IWL1 248 aa16.47■□□□□ 0.23
UBXN2A-201ENST00000309033 OR13G1Q8NGZ3 307 aa16.47■□□□□ 0.23
UBXN2A-201ENST00000309033 CRISPLD2Q9H0B8 497 aa16.47■□□□□ 0.23
UBXN2A-201ENST00000309033 C12orf10Q9HB07 376 aa16.47■□□□□ 0.23
UBXN2A-201ENST00000309033 TUBAL3A6NHL2 446 aa16.46■□□□□ 0.23
UBXN2A-201ENST00000309033 CST4P01036 141 aa16.46■□□□□ 0.23
UBXN2A-201ENST00000309033 CSF2RBP32927 897 aa16.46■□□□□ 0.23
UBXN2A-201ENST00000309033 OPRK1P41145 380 aa16.46■□□□□ 0.23
UBXN2A-201ENST00000309033 CNN1P51911 297 aaKnown RBP16.46■□□□□ 0.23
UBXN2A-201ENST00000309033 SLC36A1Q7Z2H8 476 aa16.46■□□□□ 0.23
UBXN2A-201ENST00000309033 NAA60Q9H7X0 242 aa16.46■□□□□ 0.23
UBXN2A-201ENST00000309033 TMED3Q9Y3Q3 217 aa16.46■□□□□ 0.23
UBXN2A-201ENST00000309033 KNL1Q8NG31 2342 aa16.46■□□□□ 0.23
UBXN2A-201ENST00000309033 DLEC1Q9Y238 1755 aa16.46■□□□□ 0.23
UBXN2A-201ENST00000309033 CYR61O00622 381 aa16.46■□□□□ 0.23
UBXN2A-201ENST00000309033 DUS4LO95620 317 aaKnown RBP16.46■□□□□ 0.23
UBXN2A-201ENST00000309033 PEBP1P30086 187 aaKnown RBP16.46■□□□□ 0.23
UBXN2A-201ENST00000309033 SELENOPP49908 381 aa16.46■□□□□ 0.23
UBXN2A-201ENST00000309033 SLC38A11Q08AI6 406 aa16.46■□□□□ 0.23
UBXN2A-201ENST00000309033 MYOZ1Q9NP98 299 aaPredicted RBP16.46■□□□□ 0.23
UBXN2A-201ENST00000309033 UQCC1Q9NVA1 299 aa16.46■□□□□ 0.23
UBXN2A-201ENST00000309033 RASL12Q9NYN1 266 aa16.46■□□□□ 0.23
UBXN2A-201ENST00000309033 CACNG5Q9UF02 275 aa16.46■□□□□ 0.23
UBXN2A-201ENST00000309033 OR2M5A3KFT3 312 aa16.46■□□□□ 0.23
UBXN2A-201ENST00000309033 MAGEA5P43359 124 aa16.46■□□□□ 0.23
UBXN2A-201ENST00000309033 OR6X1Q8NH79 312 aa16.46■□□□□ 0.23
UBXN2A-201ENST00000309033 OR2T6Q8NHC8 308 aa16.46■□□□□ 0.23
UBXN2A-201ENST00000309033 PTPMT1Q8WUK0 201 aaPredicted RBP16.46■□□□□ 0.23
UBXN2A-201ENST00000309033 USP54Q70EL1 1684 aa16.46■□□□□ 0.23
UBXN2A-201ENST00000309033 PDCD6O75340 191 aa16.46■□□□□ 0.22
UBXN2A-201ENST00000309033 TUSC5Q8IXB3 177 aa16.46■□□□□ 0.22
UBXN2A-201ENST00000309033 MCM3APO60318 1980 aa16.46■□□□□ 0.22
UBXN2A-201ENST00000309033 LIPT2A6NK58 231 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms