RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 CACNG5Q9UF02 275 aa11.29□□□□□ -0.6
USP38-201ENST00000307017 IGKV3D-11A0A0A0MRZ8 115 aa11.29□□□□□ -0.6
USP38-201ENST00000307017 HELTA6NFD8 242 aa11.29□□□□□ -0.6
USP38-201ENST00000307017 IGKV3-11P04433 115 aa11.29□□□□□ -0.6
USP38-201ENST00000307017 NOVA1P51513 510 aaKnown RBP11.29□□□□□ -0.6
USP38-201ENST00000307017 GLDNQ6ZMI3 551 aaPredicted RBP11.29□□□□□ -0.6
USP38-201ENST00000307017 GNPNAT1Q96EK6 184 aaPredicted RBP11.29□□□□□ -0.6
USP38-201ENST00000307017 DMRTA2Q96SC8 542 aa11.29□□□□□ -0.6
USP38-201ENST00000307017 B9D1Q9UPM9 204 aa11.29□□□□□ -0.6
USP38-201ENST00000307017 DOCK5Q9H7D0 1870 aa11.29□□□□□ -0.6
USP38-201ENST00000307017 LEUTXA8MZ59 168 aa11.29□□□□□ -0.6
USP38-201ENST00000307017 NHLRC2Q8NBF2 726 aa11.29□□□□□ -0.6
USP38-201ENST00000307017 BCL2L2Q92843 193 aaPredicted RBP11.29□□□□□ -0.6
USP38-201ENST00000307017 CNRIP1Q96F85 164 aaPredicted RBP11.29□□□□□ -0.6
USP38-201ENST00000307017 GPR137Q96N19 417 aa11.29□□□□□ -0.6
USP38-201ENST00000307017 EGLN1Q9GZT9 426 aa11.29□□□□□ -0.6
USP38-201ENST00000307017 GLRX2Q9NS18 164 aa11.29□□□□□ -0.6
USP38-201ENST00000307017 MIA3Q5JRA6 1907 aa11.29□□□□□ -0.6
USP38-201ENST00000307017 A0A1B0GUH1 482 aa11.29□□□□□ -0.6
USP38-201ENST00000307017 LRRC3CA6NJW4 275 aa11.29□□□□□ -0.6
USP38-201ENST00000307017 TAAR5O14804 337 aa11.29□□□□□ -0.6
USP38-201ENST00000307017 PPIHO43447 177 aaKnown RBP11.29□□□□□ -0.6
USP38-201ENST00000307017 SSX8Q7RTT4 187 aa11.29□□□□□ -0.6
USP38-201ENST00000307017 ST6GALNAC3Q8NDV1 305 aa11.29□□□□□ -0.6
USP38-201ENST00000307017 ZBP1Q9H171 429 aa11.29□□□□□ -0.6
USP38-201ENST00000307017 MMP26Q9NRE1 261 aa11.29□□□□□ -0.6
USP38-201ENST00000307017 MT-ATP6P00846 226 aa11.29□□□□□ -0.6
USP38-201ENST00000307017 PRSS1P07477 247 aa11.29□□□□□ -0.6
USP38-201ENST00000307017 SHBQ15464 509 aa11.29□□□□□ -0.6
USP38-201ENST00000307017 NOXO1Q8NFA2 376 aa11.29□□□□□ -0.6
USP38-201ENST00000307017 GPHA2Q96T91 129 aa11.29□□□□□ -0.6
USP38-201ENST00000307017 ZNF638Q14966 1978 aaKnown RBP11.29□□□□□ -0.6
USP38-201ENST00000307017 LRRC37A3O60309 1634 aa11.29□□□□□ -0.6
USP38-201ENST00000307017 TMEM208Q9BTX3 173 aa11.29□□□□□ -0.6
USP38-201ENST00000307017 KIR2DS1A0A191URI9 304 aa11.28□□□□□ -0.6
USP38-201ENST00000307017 EIF1P41567 113 aaKnown RBP11.28□□□□□ -0.6
USP38-201ENST00000307017 CRYBB2P43320 205 aa11.28□□□□□ -0.6
USP38-201ENST00000307017 KIR2DS4P43632 304 aa11.28□□□□□ -0.6
USP38-201ENST00000307017 EGR3Q06889 387 aa11.28□□□□□ -0.6
USP38-201ENST00000307017 SLC38A11Q08AI6 406 aa11.28□□□□□ -0.6
USP38-201ENST00000307017 KIR2DS1Q14954 304 aa11.28□□□□□ -0.6
USP38-201ENST00000307017 ZNF260Q3ZCT1 412 aa11.28□□□□□ -0.6
USP38-201ENST00000307017 RAB37Q96AX2 223 aa11.28□□□□□ -0.6
USP38-201ENST00000307017 C19orf53Q9UNZ5 99 aaPredicted RBP11.28□□□□□ -0.6
USP38-201ENST00000307017 TEX50A0A1B0GTY4 177 aa11.28□□□□□ -0.6
USP38-201ENST00000307017 DNASE2O00115 360 aaPredicted RBP11.28□□□□□ -0.6
USP38-201ENST00000307017 PIKFYVEQ9Y2I7 2098 aa11.28□□□□□ -0.6
USP38-201ENST00000307017 C3orf85A0A1B0GTC6 90 aa11.28□□□□□ -0.6
USP38-201ENST00000307017 TMIGD3P0DMS9 266 aaPredicted RBP11.28□□□□□ -0.6
USP38-201ENST00000307017 REG1BP48304 166 aa11.28□□□□□ -0.6
USP38-201ENST00000307017 OXGR1Q96P68 337 aa11.28□□□□□ -0.6
USP38-201ENST00000307017 ADH4P08319 380 aa11.28□□□□□ -0.6
USP38-201ENST00000307017 CST2P09228 141 aa11.28□□□□□ -0.6
USP38-201ENST00000307017 OR2D3Q8NGH3 330 aa11.28□□□□□ -0.6
USP38-201ENST00000307017 NAT6Q93015 286 aa11.28□□□□□ -0.6
USP38-201ENST00000307017 HPP00738 406 aa11.28□□□□□ -0.6
USP38-201ENST00000307017 GABRA1P14867 456 aa11.28□□□□□ -0.6
USP38-201ENST00000307017 BCL3P20749 454 aa11.28□□□□□ -0.6
USP38-201ENST00000307017 MRPS21P82921 87 aaKnown RBP11.28□□□□□ -0.6
USP38-201ENST00000307017 LSM11P83369 360 aaKnown RBP eCLIP11.28□□□□□ -0.6
USP38-201ENST00000307017 FCRL6Q6DN72 434 aa11.28□□□□□ -0.6
USP38-201ENST00000307017 OR2M3Q8NG83 312 aa11.28□□□□□ -0.6
USP38-201ENST00000307017 EVA1AQ9H8M9 152 aa11.28□□□□□ -0.6
USP38-201ENST00000307017 POMT2Q9UKY4 750 aa11.28□□□□□ -0.6
USP38-201ENST00000307017 NUDT3O95989 172 aa11.27□□□□□ -0.6
USP38-201ENST00000307017 SUCLG1P53597 346 aaKnown RBP11.27□□□□□ -0.6
USP38-201ENST00000307017 SPINK14Q6IE38 97 aa11.27□□□□□ -0.6
USP38-201ENST00000307017 OR4D10Q8NGI6 311 aa11.27□□□□□ -0.6
USP38-201ENST00000307017 HDHD3Q9BSH5 251 aaPredicted RBP11.27□□□□□ -0.6
USP38-201ENST00000307017 THAP10Q9P2Z0 257 aaPredicted RBP11.27□□□□□ -0.6
USP38-201ENST00000307017 TBX19O60806 448 aa11.27□□□□□ -0.6
USP38-201ENST00000307017 RAB1AP62820 205 aa11.27□□□□□ -0.6
USP38-201ENST00000307017 IQCJQ1A5X6 159 aa11.27□□□□□ -0.6
USP38-201ENST00000307017 AWAT1Q58HT5 328 aa11.27□□□□□ -0.6
USP38-201ENST00000307017 XAF1Q6GPH4 301 aa11.27□□□□□ -0.6
USP38-201ENST00000307017 FAM109BQ6ICB4 259 aaPredicted RBP11.27□□□□□ -0.6
USP38-201ENST00000307017 FGF14Q92915 247 aa11.27□□□□□ -0.6
USP38-201ENST00000307017 TIMD4Q96H15 378 aa11.27□□□□□ -0.6
USP38-201ENST00000307017 GPX7Q96SL4 187 aaPredicted RBP11.27□□□□□ -0.6
USP38-201ENST00000307017 IGHA1P01876 353 aa11.27□□□□□ -0.61
USP38-201ENST00000307017 IGHA2P01877 340 aa11.27□□□□□ -0.61
USP38-201ENST00000307017 CD22P20273 847 aa11.27□□□□□ -0.61
USP38-201ENST00000307017 DLK1P80370 383 aa11.27□□□□□ -0.61
USP38-201ENST00000307017 DHRS2Q13268 280 aa11.27□□□□□ -0.61
USP38-201ENST00000307017 SSX1Q16384 188 aa11.27□□□□□ -0.61
USP38-201ENST00000307017 GSG1Q2KHT4 349 aa11.27□□□□□ -0.61
USP38-201ENST00000307017 FAM210BQ96KR6 192 aa11.27□□□□□ -0.61
USP38-201ENST00000307017 CDCA4Q9BXL8 241 aa11.27□□□□□ -0.61
USP38-201ENST00000307017 CXorf65A6NEN9 183 aa11.27□□□□□ -0.61
USP38-201ENST00000307017 NSUN5P2Q63ZY6 315 aa11.27□□□□□ -0.61
USP38-201ENST00000307017 POM121L2Q96KW2 1035 aa11.27□□□□□ -0.61
USP38-201ENST00000307017 OR2A14Q96R47 310 aa11.27□□□□□ -0.61
USP38-201ENST00000307017 NDRG3Q9UGV2 375 aa11.27□□□□□ -0.61
USP38-201ENST00000307017 PRRC2BQ5JSZ5 2229 aaKnown RBP11.27□□□□□ -0.61
USP38-201ENST00000307017 NMUP48645 174 aa11.27□□□□□ -0.61
USP38-201ENST00000307017 YPEL5P62699 121 aa11.27□□□□□ -0.61
USP38-201ENST00000307017 B4GALNT1Q00973 533 aa11.27□□□□□ -0.61
USP38-201ENST00000307017 ZNF788Q6ZQV5 615 aa11.27□□□□□ -0.61
USP38-201ENST00000307017 TAAR9Q96RI9 348 aa11.27□□□□□ -0.61
USP38-201ENST00000307017 FLRT3Q9NZU0 649 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms