RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 MMP26Q9NRE1 261 aa12.82□□□□□ -0.36
PTPN9-201ENST00000306726 WIF1Q9Y5W5 379 aa12.82□□□□□ -0.36
PTPN9-201ENST00000306726 PI4KAP42356 2102 aa12.82□□□□□ -0.36
PTPN9-201ENST00000306726 SFT2D2O95562 160 aa12.82□□□□□ -0.36
PTPN9-201ENST00000306726 TAS2R31P59538 309 aa12.82□□□□□ -0.36
PTPN9-201ENST00000306726 POLR2GP62487 172 aaKnown RBP eCLIP12.82□□□□□ -0.36
PTPN9-201ENST00000306726 EIF5AP63241 154 aaKnown RBP12.82□□□□□ -0.36
PTPN9-201ENST00000306726 PIGYQ3MUY2 71 aa12.82□□□□□ -0.36
PTPN9-201ENST00000306726 EMC4Q5J8M3 183 aa12.82□□□□□ -0.36
PTPN9-201ENST00000306726 OR2B11Q5JQS5 317 aa12.82□□□□□ -0.36
PTPN9-201ENST00000306726 CARFQ8N187 725 aa12.82□□□□□ -0.36
PTPN9-201ENST00000306726 PLPPR2Q96GM1 343 aa12.82□□□□□ -0.36
PTPN9-201ENST00000306726 SPTBN1Q01082 2364 aaKnown RBP12.82□□□□□ -0.36
PTPN9-201ENST00000306726 A0A0A6YYD4 124 aa12.81□□□□□ -0.36
PTPN9-201ENST00000306726 DDAH2O95865 285 aa12.81□□□□□ -0.36
PTPN9-201ENST00000306726 ZNF728P0DKX0 622 aa12.81□□□□□ -0.36
PTPN9-201ENST00000306726 CSNK1A1P48729 337 aa12.81□□□□□ -0.36
PTPN9-201ENST00000306726 FGF8P55075 233 aaPredicted RBP12.81□□□□□ -0.36
PTPN9-201ENST00000306726 TRIM61Q5EBN2 209 aa12.81□□□□□ -0.36
PTPN9-201ENST00000306726 LPCAT3Q6P1A2 487 aa12.81□□□□□ -0.36
PTPN9-201ENST00000306726 OR10D4PQ8NGN7 298 aa12.81□□□□□ -0.36
PTPN9-201ENST00000306726 TCTEX1D2Q8WW35 142 aa12.81□□□□□ -0.36
PTPN9-201ENST00000306726 P4HTMQ9NXG6 502 aa12.81□□□□□ -0.36
PTPN9-201ENST00000306726 ZNF814B7Z6K7 855 aa12.81□□□□□ -0.36
PTPN9-201ENST00000306726 TESK1Q15569 626 aa12.81□□□□□ -0.36
PTPN9-201ENST00000306726 IGFBP7Q16270 282 aa12.81□□□□□ -0.36
PTPN9-201ENST00000306726 TMEM268Q5VZI3 342 aa12.81□□□□□ -0.36
PTPN9-201ENST00000306726 YRDCQ86U90 279 aaKnown RBP12.81□□□□□ -0.36
PTPN9-201ENST00000306726 NKAIN3Q8N8D7 197 aa12.81□□□□□ -0.36
PTPN9-201ENST00000306726 WDSUB1Q8N9V3 476 aa12.81□□□□□ -0.36
PTPN9-201ENST00000306726 CA5BP1Q8WTZ4 195 aa12.81□□□□□ -0.36
PTPN9-201ENST00000306726 BORCS8Q96FH0 119 aa12.81□□□□□ -0.36
PTPN9-201ENST00000306726 UNKLQ9H9P5 680 aaKnown RBP12.81□□□□□ -0.36
PTPN9-201ENST00000306726 TTC28Q96AY4 2481 aa12.81□□□□□ -0.36
PTPN9-201ENST00000306726 A0A096LPE4 126 aa12.81□□□□□ -0.36
PTPN9-201ENST00000306726 A0A1W2PPZ6 126 aa12.81□□□□□ -0.36
PTPN9-201ENST00000306726 SCAF4O95104 1147 aaKnown RBP12.81□□□□□ -0.36
PTPN9-201ENST00000306726 B4GALT1P15291 398 aa12.81□□□□□ -0.36
PTPN9-201ENST00000306726 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.81□□□□□ -0.36
PTPN9-201ENST00000306726 C17orf82Q86X59 251 aaPredicted RBP12.81□□□□□ -0.36
PTPN9-201ENST00000306726 ZNF721Q8TF20 911 aa12.81□□□□□ -0.36
PTPN9-201ENST00000306726 NAT6Q93015 286 aa12.81□□□□□ -0.36
PTPN9-201ENST00000306726 SCGB3A2Q96PL1 93 aa12.81□□□□□ -0.36
PTPN9-201ENST00000306726 HSF4Q9ULV5 492 aa12.81□□□□□ -0.36
PTPN9-201ENST00000306726 FREM1Q5H8C1 2179 aa12.81□□□□□ -0.36
PTPN9-201ENST00000306726 ZNF724A8MTY0 619 aa12.8□□□□□ -0.36
PTPN9-201ENST00000306726 ZNF813Q6ZN06 617 aa12.8□□□□□ -0.36
PTPN9-201ENST00000306726 FBXL14Q8N1E6 418 aa12.8□□□□□ -0.36
PTPN9-201ENST00000306726 LRFN3Q9BTN0 628 aa12.8□□□□□ -0.36
PTPN9-201ENST00000306726 FAM212BQ9NTI7 297 aaPredicted RBP12.8□□□□□ -0.36
PTPN9-201ENST00000306726 AURKAIP1Q9NWT8 199 aaPredicted RBP12.8□□□□□ -0.36
PTPN9-201ENST00000306726 SLC2A8Q9NY64 477 aa12.8□□□□□ -0.36
PTPN9-201ENST00000306726 A6NIZ1 184 aa12.8□□□□□ -0.36
PTPN9-201ENST00000306726 HSPA12AO43301 675 aa12.8□□□□□ -0.36
PTPN9-201ENST00000306726 MMP9P14780 707 aa12.8□□□□□ -0.36
PTPN9-201ENST00000306726 PTGER4P35408 488 aa12.8□□□□□ -0.36
PTPN9-201ENST00000306726 ELLP55199 621 aaPredicted RBP12.8□□□□□ -0.36
PTPN9-201ENST00000306726 RAP1BP61224 184 aa12.8□□□□□ -0.36
PTPN9-201ENST00000306726 RAB11AP62491 216 aa12.8□□□□□ -0.36
PTPN9-201ENST00000306726 RAP1AP62834 184 aa12.8□□□□□ -0.36
PTPN9-201ENST00000306726 HSD11B2P80365 405 aa12.8□□□□□ -0.36
PTPN9-201ENST00000306726 DHODHQ02127 395 aa12.8□□□□□ -0.36
PTPN9-201ENST00000306726 HLA-BQ31612 363 aa12.8□□□□□ -0.36
PTPN9-201ENST00000306726 PRSS54Q6PEW0 395 aa12.8□□□□□ -0.36
PTPN9-201ENST00000306726 HPSE2Q8WWQ2 592 aa12.8□□□□□ -0.36
PTPN9-201ENST00000306726 MRGPRFQ96AM1 343 aa12.8□□□□□ -0.36
PTPN9-201ENST00000306726 ZNF837Q96EG3 531 aaPredicted RBP12.8□□□□□ -0.36
PTPN9-201ENST00000306726 WFIKKN1Q96NZ8 548 aa12.8□□□□□ -0.36
PTPN9-201ENST00000306726 ULBP2Q9BZM5 246 aa12.8□□□□□ -0.36
PTPN9-201ENST00000306726 C1orf123Q9NWV4 160 aa12.8□□□□□ -0.36
PTPN9-201ENST00000306726 TLCD2A6NGC4 264 aa12.8□□□□□ -0.36
PTPN9-201ENST00000306726 FRG2CA6NGY1 282 aa12.8□□□□□ -0.36
PTPN9-201ENST00000306726 HPNP05981 417 aa12.8□□□□□ -0.36
PTPN9-201ENST00000306726 THRSPQ92748 146 aa12.8□□□□□ -0.36
PTPN9-201ENST00000306726 RCC2Q9P258 522 aaKnown RBP12.8□□□□□ -0.36
PTPN9-201ENST00000306726 GNG13Q9P2W3 67 aa12.8□□□□□ -0.36
PTPN9-201ENST00000306726 ALG1L2C9J202 215 aa12.79□□□□□ -0.36
PTPN9-201ENST00000306726 CYB5BO43169 146 aa12.79□□□□□ -0.36
PTPN9-201ENST00000306726 EIF4E2O60573 245 aaKnown RBP12.79□□□□□ -0.36
PTPN9-201ENST00000306726 MT-ATP6P00846 226 aa12.79□□□□□ -0.36
PTPN9-201ENST00000306726 PLA2G2CQ5R387 149 aa12.79□□□□□ -0.36
PTPN9-201ENST00000306726 ZNF695Q8IW36 515 aa12.79□□□□□ -0.36
PTPN9-201ENST00000306726 SLC30A7Q8NEW0 376 aa12.79□□□□□ -0.36
PTPN9-201ENST00000306726 HAS2Q92819 552 aa12.79□□□□□ -0.36
PTPN9-201ENST00000306726 TMEM230Q96A57 120 aa12.79□□□□□ -0.36
PTPN9-201ENST00000306726 LRFN5Q96NI6 719 aa12.79□□□□□ -0.36
PTPN9-201ENST00000306726 LIPGQ9Y5X9 500 aa12.79□□□□□ -0.36
PTPN9-201ENST00000306726 CACNA1BQ00975 2339 aa12.79□□□□□ -0.36
PTPN9-201ENST00000306726 HOXA1P49639 335 aaPredicted RBP12.79□□□□□ -0.36
PTPN9-201ENST00000306726 C17orf67Q0P5P2 114 aa12.79□□□□□ -0.36
PTPN9-201ENST00000306726 ACER2Q5QJU3 275 aa12.79□□□□□ -0.36
PTPN9-201ENST00000306726 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.79□□□□□ -0.36
PTPN9-201ENST00000306726 INTS12Q96CB8 462 aaKnown RBP12.79□□□□□ -0.36
PTPN9-201ENST00000306726 LUZP4Q9P127 313 aa12.79□□□□□ -0.36
PTPN9-201ENST00000306726 GLP1RP43220 463 aa12.79□□□□□ -0.36
PTPN9-201ENST00000306726 GSK3AP49840 483 aa12.79□□□□□ -0.36
PTPN9-201ENST00000306726 EFNA3P52797 238 aa12.79□□□□□ -0.36
PTPN9-201ENST00000306726 OR52M1Q8NGK5 317 aa12.79□□□□□ -0.36
PTPN9-201ENST00000306726 AQP3Q92482 292 aa12.79□□□□□ -0.36
PTPN9-201ENST00000306726 CRLF2Q9HC73 371 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms