RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 ADAMTS7Q9UKP4 1686 aa9.31□□□□□ -0.92
CLIP1-201ENST00000302528 F2RL2O00254 374 aa9.31□□□□□ -0.92
CLIP1-201ENST00000302528 LYZL6O75951 148 aa9.31□□□□□ -0.92
CLIP1-201ENST00000302528 TCL1AP56279 114 aa9.31□□□□□ -0.92
CLIP1-201ENST00000302528 GUCA2AQ02747 115 aa9.31□□□□□ -0.92
CLIP1-201ENST00000302528 C6orf201Q7Z4U5 140 aa9.31□□□□□ -0.92
CLIP1-201ENST00000302528 BPIFA4PQ86YQ2 179 aa9.31□□□□□ -0.92
CLIP1-201ENST00000302528 MUC15Q8N387 334 aa9.31□□□□□ -0.92
CLIP1-201ENST00000302528 OR2G2Q8NGZ5 317 aa9.31□□□□□ -0.92
CLIP1-201ENST00000302528 ANKRD36CQ5JPF3 1778 aa9.31□□□□□ -0.92
CLIP1-201ENST00000302528 TRGV5A0A0B4J1U4 118 aa9.3□□□□□ -0.92
CLIP1-201ENST00000302528 FBLL1A6NHQ2 334 aaKnown RBP9.3□□□□□ -0.92
CLIP1-201ENST00000302528 H0Y8X5 98 aa9.3□□□□□ -0.92
CLIP1-201ENST00000302528 P01737 135 aa9.3□□□□□ -0.92
CLIP1-201ENST00000302528 PDCD1Q15116 288 aa9.3□□□□□ -0.92
CLIP1-201ENST00000302528 CD226Q15762 336 aa9.3□□□□□ -0.92
CLIP1-201ENST00000302528 HLA-DRB5Q30154 266 aa9.3□□□□□ -0.92
CLIP1-201ENST00000302528 CA13Q8N1Q1 262 aa9.3□□□□□ -0.92
CLIP1-201ENST00000302528 OR4C3Q8NH37 302 aa9.3□□□□□ -0.92
CLIP1-201ENST00000302528 SPNS1Q9H2V7 528 aa9.3□□□□□ -0.92
CLIP1-201ENST00000302528 DUSP21Q9H596 190 aa9.3□□□□□ -0.92
CLIP1-201ENST00000302528 KLK11Q9UBX7 282 aa9.3□□□□□ -0.92
CLIP1-201ENST00000302528 PCOLCE2Q9UKZ9 415 aa9.3□□□□□ -0.92
CLIP1-201ENST00000302528 LRP5O75197 1615 aa9.3□□□□□ -0.92
CLIP1-201ENST00000302528 hADV38S2A0JD32 116 aa9.3□□□□□ -0.92
CLIP1-201ENST00000302528 COX6CP09669 75 aa9.3□□□□□ -0.92
CLIP1-201ENST00000302528 BRS3P32247 399 aa9.3□□□□□ -0.92
CLIP1-201ENST00000302528 ISL1P61371 349 aa9.3□□□□□ -0.92
CLIP1-201ENST00000302528 C21orf62-AS1Q17RA5 79 aa9.3□□□□□ -0.92
CLIP1-201ENST00000302528 IZUMO4Q1ZYL8 232 aa9.3□□□□□ -0.92
CLIP1-201ENST00000302528 LINC00303Q3SY05 128 aa9.3□□□□□ -0.92
CLIP1-201ENST00000302528 PYCR3Q53H96 274 aa9.3□□□□□ -0.92
CLIP1-201ENST00000302528 LINC00299Q6ZSB3 139 aa9.3□□□□□ -0.92
CLIP1-201ENST00000302528 KMT5CQ86Y97 462 aa9.3□□□□□ -0.92
CLIP1-201ENST00000302528 OR8A1Q8NGG7 326 aa9.3□□□□□ -0.92
CLIP1-201ENST00000302528 ORAI1Q96D31 301 aa9.3□□□□□ -0.92
CLIP1-201ENST00000302528 KTI12Q96EK9 354 aaPredicted RBP9.3□□□□□ -0.92
CLIP1-201ENST00000302528 TMEM218A2RU14 115 aa9.3□□□□□ -0.92
CLIP1-201ENST00000302528 PRKNO60260 465 aaPredicted RBP9.3□□□□□ -0.92
CLIP1-201ENST00000302528 GNG7O60262 68 aa9.3□□□□□ -0.92
CLIP1-201ENST00000302528 RPS4Y1P22090 263 aaKnown RBP9.3□□□□□ -0.92
CLIP1-201ENST00000302528 BAHD1Q8TBE0 780 aaPredicted RBP9.3□□□□□ -0.92
CLIP1-201ENST00000302528 FLYWCH2Q96CP2 140 aaKnown RBP9.3□□□□□ -0.92
CLIP1-201ENST00000302528 SLC35B3Q9H1N7 401 aa9.3□□□□□ -0.92
CLIP1-201ENST00000302528 B9D1Q9UPM9 204 aa9.3□□□□□ -0.92
CLIP1-201ENST00000302528 IGHV3-43A0A0B4J1X8 118 aa9.3□□□□□ -0.92
CLIP1-201ENST00000302528 IGSF23A1L1A6 192 aa9.3□□□□□ -0.92
CLIP1-201ENST00000302528 POM121BA6NF01 834 aa9.3□□□□□ -0.92
CLIP1-201ENST00000302528 MFSD2BA6NFX1 497 aa9.3□□□□□ -0.92
CLIP1-201ENST00000302528 TSPAN12O95859 305 aa9.3□□□□□ -0.92
CLIP1-201ENST00000302528 IGHV3-43DP0DP04 118 aa9.3□□□□□ -0.92
CLIP1-201ENST00000302528 NUFIP2Q7Z417 695 aaKnown RBP9.3□□□□□ -0.92
CLIP1-201ENST00000302528 REC114Q7Z4M0 266 aa9.3□□□□□ -0.92
CLIP1-201ENST00000302528 MRGPREQ86SM8 312 aa9.3□□□□□ -0.92
CLIP1-201ENST00000302528 ETFBKMTQ8IXQ9 262 aa9.3□□□□□ -0.92
CLIP1-201ENST00000302528 DND1Q8IYX4 353 aaKnown RBP9.3□□□□□ -0.92
CLIP1-201ENST00000302528 D2HGDHQ8N465 521 aa9.3□□□□□ -0.92
CLIP1-201ENST00000302528 DUSP18Q8NEJ0 188 aa9.3□□□□□ -0.92
CLIP1-201ENST00000302528 OR10A7Q8NGE5 316 aa9.3□□□□□ -0.92
CLIP1-201ENST00000302528 TMEM174Q8WUU8 243 aa9.3□□□□□ -0.92
CLIP1-201ENST00000302528 SPSB1Q96BD6 273 aa9.3□□□□□ -0.92
CLIP1-201ENST00000302528 FAHD2AQ96GK7 314 aa9.3□□□□□ -0.92
CLIP1-201ENST00000302528 OR2D2Q9H210 308 aa9.3□□□□□ -0.92
CLIP1-201ENST00000302528 RABAC1Q9UI14 185 aa9.3□□□□□ -0.92
CLIP1-201ENST00000302528 DDX60Q8IY21 1712 aaKnown RBP9.3□□□□□ -0.92
CLIP1-201ENST00000302528 OR5B21A6NL26 309 aa9.3□□□□□ -0.92
CLIP1-201ENST00000302528 ZAR1LA6NP61 321 aa9.3□□□□□ -0.92
CLIP1-201ENST00000302528 H3BMH7 237 aa9.3□□□□□ -0.92
CLIP1-201ENST00000302528 H7C2G1 150 aa9.3□□□□□ -0.92
CLIP1-201ENST00000302528 KLK10O43240 276 aa9.3□□□□□ -0.92
CLIP1-201ENST00000302528 ZGLP1P0C6A0 271 aa9.3□□□□□ -0.92
CLIP1-201ENST00000302528 EMDP50402 254 aa9.3□□□□□ -0.92
CLIP1-201ENST00000302528 FGF8P55075 233 aaPredicted RBP9.3□□□□□ -0.92
CLIP1-201ENST00000302528 DSCR4P56555 118 aaPredicted RBP9.3□□□□□ -0.92
CLIP1-201ENST00000302528 PAFAH1B2P68402 229 aa9.3□□□□□ -0.92
CLIP1-201ENST00000302528 TNFAIP6P98066 277 aaPredicted RBP9.3□□□□□ -0.92
CLIP1-201ENST00000302528 XKR7Q5GH72 579 aa9.3□□□□□ -0.92
CLIP1-201ENST00000302528 ZNF343Q6P1L6 599 aa9.3□□□□□ -0.92
CLIP1-201ENST00000302528 Q9N2K0 584 aa9.3□□□□□ -0.92
CLIP1-201ENST00000302528 TMEM167BQ9NRX6 74 aa9.3□□□□□ -0.92
CLIP1-201ENST00000302528 FOXJ3Q9UPW0 622 aa9.3□□□□□ -0.92
CLIP1-201ENST00000302528 ANKRD12Q6UB98 2062 aa9.29□□□□□ -0.92
CLIP1-201ENST00000302528 TMEM202A6NGA9 273 aa9.29□□□□□ -0.92
CLIP1-201ENST00000302528 ST6GAL1P15907 406 aa9.29□□□□□ -0.92
CLIP1-201ENST00000302528 COL8A1P27658 744 aa9.29□□□□□ -0.92
CLIP1-201ENST00000302528 BSGP35613 385 aa9.29□□□□□ -0.92
CLIP1-201ENST00000302528 WNT3P56703 355 aa9.29□□□□□ -0.92
CLIP1-201ENST00000302528 CLLU1Q5K131 121 aa9.29□□□□□ -0.92
CLIP1-201ENST00000302528 RNFT1Q5M7Z0 435 aa9.29□□□□□ -0.92
CLIP1-201ENST00000302528 ARL6IP6Q8N6S5 226 aa9.29□□□□□ -0.92
CLIP1-201ENST00000302528 OR13G1Q8NGZ3 307 aa9.29□□□□□ -0.92
CLIP1-201ENST00000302528 PATE1Q8WXA2 126 aa9.29□□□□□ -0.92
CLIP1-201ENST00000302528 CACNG5Q9UF02 275 aa9.29□□□□□ -0.92
CLIP1-201ENST00000302528 FRG2CA6NGY1 282 aa9.29□□□□□ -0.92
CLIP1-201ENST00000302528 CA6P23280 308 aa9.29□□□□□ -0.92
CLIP1-201ENST00000302528 ZNF77Q15935 545 aa9.29□□□□□ -0.92
CLIP1-201ENST00000302528 TCTN3Q6NUS6 607 aa9.29□□□□□ -0.92
CLIP1-201ENST00000302528 LSMEM1Q8N8F7 131 aa9.29□□□□□ -0.92
CLIP1-201ENST00000302528 FADS6Q8N9I5 356 aa9.29□□□□□ -0.92
CLIP1-201ENST00000302528 SCMH1Q96GD3 660 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms