RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 OR10AC1Q8NH08 325 aa12.08□□□□□ -0.48
CHRFAM7A-201ENST00000299847 CMTM3Q96MX0 182 aa12.08□□□□□ -0.48
CHRFAM7A-201ENST00000299847 TMEM147Q9BVK8 224 aa12.08□□□□□ -0.48
CHRFAM7A-201ENST00000299847 CACNG5Q9UF02 275 aa12.08□□□□□ -0.48
CHRFAM7A-201ENST00000299847 PPIL1Q9Y3C6 166 aa12.08□□□□□ -0.48
CHRFAM7A-201ENST00000299847 CTGFP29279 349 aa12.08□□□□□ -0.48
CHRFAM7A-201ENST00000299847 TPBGQ13641 420 aa12.08□□□□□ -0.48
CHRFAM7A-201ENST00000299847 ZFPL1O95159 310 aa12.07□□□□□ -0.48
CHRFAM7A-201ENST00000299847 CBLN3Q6UW01 205 aa12.07□□□□□ -0.48
CHRFAM7A-201ENST00000299847 TTC9Q92623 222 aa12.07□□□□□ -0.48
CHRFAM7A-201ENST00000299847 TM4SF19Q96DZ7 209 aa12.07□□□□□ -0.48
CHRFAM7A-201ENST00000299847 MAP6Q96JE9 813 aa12.07□□□□□ -0.48
CHRFAM7A-201ENST00000299847 SLC26A1Q9H2B4 701 aa12.07□□□□□ -0.48
CHRFAM7A-201ENST00000299847 OCIAD1Q9NX40 245 aa12.07□□□□□ -0.48
CHRFAM7A-201ENST00000299847 OR5V1Q9UGF6 321 aa12.07□□□□□ -0.48
CHRFAM7A-201ENST00000299847 C9orf170A2RU37 121 aa12.07□□□□□ -0.48
CHRFAM7A-201ENST00000299847 DNASE2O00115 360 aaPredicted RBP12.07□□□□□ -0.48
CHRFAM7A-201ENST00000299847 MT-CO3P00414 261 aa12.07□□□□□ -0.48
CHRFAM7A-201ENST00000299847 RAB5AP20339 215 aa12.07□□□□□ -0.48
CHRFAM7A-201ENST00000299847 MPLP40238 635 aa12.07□□□□□ -0.48
CHRFAM7A-201ENST00000299847 PWWP2BQ6NUJ5 590 aa12.07□□□□□ -0.48
CHRFAM7A-201ENST00000299847 ZNF66Q6ZN08 573 aa12.07□□□□□ -0.48
CHRFAM7A-201ENST00000299847 SOX8P57073 446 aa12.07□□□□□ -0.48
CHRFAM7A-201ENST00000299847 HIST1H3AP68431 136 aa12.07□□□□□ -0.48
CHRFAM7A-201ENST00000299847 PJVKQ0ZLH3 352 aa12.07□□□□□ -0.48
CHRFAM7A-201ENST00000299847 CDC20Q12834 499 aa12.07□□□□□ -0.48
CHRFAM7A-201ENST00000299847 THSD4Q6ZMP0 1018 aa12.07□□□□□ -0.48
CHRFAM7A-201ENST00000299847 ABI3BPQ7Z7G0 1075 aa12.07□□□□□ -0.48
CHRFAM7A-201ENST00000299847 CTAG2O75638 210 aa12.07□□□□□ -0.48
CHRFAM7A-201ENST00000299847 FUT7Q11130 342 aa12.07□□□□□ -0.48
CHRFAM7A-201ENST00000299847 SEZ6L2Q6UXD5 910 aa12.07□□□□□ -0.48
CHRFAM7A-201ENST00000299847 MYOZ1Q9NP98 299 aaPredicted RBP12.07□□□□□ -0.48
CHRFAM7A-201ENST00000299847 NAT8BQ9UHF3 227 aa12.07□□□□□ -0.48
CHRFAM7A-201ENST00000299847 LILRA5A6NI73 299 aa12.07□□□□□ -0.48
CHRFAM7A-201ENST00000299847 HSPB2A8KAH6 182 aa12.07□□□□□ -0.48
CHRFAM7A-201ENST00000299847 BCL3P20749 454 aa12.07□□□□□ -0.48
CHRFAM7A-201ENST00000299847 HNRNPA3P51991 378 aaKnown RBP12.07□□□□□ -0.48
CHRFAM7A-201ENST00000299847 HSPB2Q16082 182 aa12.07□□□□□ -0.48
CHRFAM7A-201ENST00000299847 DYRK2Q92630 601 aa12.07□□□□□ -0.48
CHRFAM7A-201ENST00000299847 PRRX2Q99811 253 aa12.07□□□□□ -0.48
CHRFAM7A-201ENST00000299847 VAMP8Q9BV40 100 aa12.07□□□□□ -0.48
CHRFAM7A-201ENST00000299847 UQCC1Q9NVA1 299 aa12.07□□□□□ -0.48
CHRFAM7A-201ENST00000299847 PKD1L3Q7Z443 1732 aa12.06□□□□□ -0.48
CHRFAM7A-201ENST00000299847 LOC102724200A0A096LPH7 203 aaPredicted RBP12.06□□□□□ -0.48
CHRFAM7A-201ENST00000299847 ZNF737O75373 536 aa12.06□□□□□ -0.48
CHRFAM7A-201ENST00000299847 DHRS3O75911 302 aa12.06□□□□□ -0.48
CHRFAM7A-201ENST00000299847 NEURL1O76050 574 aa12.06□□□□□ -0.48
CHRFAM7A-201ENST00000299847 OR3A1P47881 315 aa12.06□□□□□ -0.48
CHRFAM7A-201ENST00000299847 TNXAQ16473 311 aa12.06□□□□□ -0.48
CHRFAM7A-201ENST00000299847 ACER2Q5QJU3 275 aa12.06□□□□□ -0.48
CHRFAM7A-201ENST00000299847 CCDC190Q86UF4 302 aa12.06□□□□□ -0.48
CHRFAM7A-201ENST00000299847 ZPBPQ9BS86 351 aa12.06□□□□□ -0.48
CHRFAM7A-201ENST00000299847 TCTAP57738 103 aa12.06□□□□□ -0.48
CHRFAM7A-201ENST00000299847 SSX1Q16384 188 aa12.06□□□□□ -0.48
CHRFAM7A-201ENST00000299847 HFEQ30201 348 aa12.06□□□□□ -0.48
CHRFAM7A-201ENST00000299847 DUSP18Q8NEJ0 188 aa12.06□□□□□ -0.48
CHRFAM7A-201ENST00000299847 OR10D4PQ8NGN7 298 aa12.06□□□□□ -0.48
CHRFAM7A-201ENST00000299847 GPR137Q96N19 417 aa12.06□□□□□ -0.48
CHRFAM7A-201ENST00000299847 UBTD1Q9HAC8 227 aa12.06□□□□□ -0.48
CHRFAM7A-201ENST00000299847 IGHV3OR15-7A0A075B7D8 119 aa12.06□□□□□ -0.48
CHRFAM7A-201ENST00000299847 KCNE1BA0A087WTH5 132 aa12.06□□□□□ -0.48
CHRFAM7A-201ENST00000299847 IGHA1P01876 353 aa12.06□□□□□ -0.48
CHRFAM7A-201ENST00000299847 IGHA2P01877 340 aa12.06□□□□□ -0.48
CHRFAM7A-201ENST00000299847 PNLIPP16233 465 aa12.06□□□□□ -0.48
CHRFAM7A-201ENST00000299847 G6PCP35575 357 aa12.06□□□□□ -0.48
CHRFAM7A-201ENST00000299847 SUMO3P55854 103 aaPredicted RBP12.06□□□□□ -0.48
CHRFAM7A-201ENST00000299847 FOXL2P58012 376 aa12.06□□□□□ -0.48
CHRFAM7A-201ENST00000299847 MOGAT2Q3SYC2 334 aa12.06□□□□□ -0.48
CHRFAM7A-201ENST00000299847 OR2W3Q7Z3T1 314 aa12.06□□□□□ -0.48
CHRFAM7A-201ENST00000299847 MRGPRX3Q96LB0 322 aa12.06□□□□□ -0.48
CHRFAM7A-201ENST00000299847 UFC1Q9Y3C8 167 aa12.06□□□□□ -0.48
CHRFAM7A-201ENST00000299847 PLPP3O14495 311 aa12.06□□□□□ -0.48
CHRFAM7A-201ENST00000299847 SRP14P37108 136 aaKnown RBP12.06□□□□□ -0.48
CHRFAM7A-201ENST00000299847 GGNBP1Q5YKI7 109 aa12.06□□□□□ -0.48
CHRFAM7A-201ENST00000299847 XAF1Q6GPH4 301 aa12.06□□□□□ -0.48
CHRFAM7A-201ENST00000299847 ZNF788Q6ZQV5 615 aa12.06□□□□□ -0.48
CHRFAM7A-201ENST00000299847 MSRB3Q8IXL7 192 aa12.06□□□□□ -0.48
CHRFAM7A-201ENST00000299847 FAM60AQ9NP50 221 aa12.06□□□□□ -0.48
CHRFAM7A-201ENST00000299847 CDC42EP2O14613 210 aa12.06□□□□□ -0.48
CHRFAM7A-201ENST00000299847 HSBP1O75506 76 aa12.06□□□□□ -0.48
CHRFAM7A-201ENST00000299847 CAMPP49913 170 aa12.06□□□□□ -0.48
CHRFAM7A-201ENST00000299847 DYNLT3P51808 116 aa12.06□□□□□ -0.48
CHRFAM7A-201ENST00000299847 NHLH1Q02575 133 aa12.06□□□□□ -0.48
CHRFAM7A-201ENST00000299847 NHLH2Q02577 135 aa12.06□□□□□ -0.48
CHRFAM7A-201ENST00000299847 ZNF260Q3ZCT1 412 aa12.06□□□□□ -0.48
CHRFAM7A-201ENST00000299847 HES3Q5TGS1 186 aa12.06□□□□□ -0.48
CHRFAM7A-201ENST00000299847 OR4F17Q8NGA8 305 aa12.06□□□□□ -0.48
CHRFAM7A-201ENST00000299847 C4orf45Q96LM5 186 aa12.06□□□□□ -0.48
CHRFAM7A-201ENST00000299847 SFT2D2O95562 160 aa12.05□□□□□ -0.48
CHRFAM7A-201ENST00000299847 ACTL6AO96019 429 aa12.05□□□□□ -0.48
CHRFAM7A-201ENST00000299847 CSN3P07498 182 aa12.05□□□□□ -0.48
CHRFAM7A-201ENST00000299847 TNFRSF1AP19438 455 aa12.05□□□□□ -0.48
CHRFAM7A-201ENST00000299847 GNG4P50150 75 aa12.05□□□□□ -0.48
CHRFAM7A-201ENST00000299847 C19orf57Q0VDD7 668 aa12.05□□□□□ -0.48
CHRFAM7A-201ENST00000299847 ZNF561Q8N587 486 aa12.05□□□□□ -0.48
CHRFAM7A-201ENST00000299847 NHLRC2Q8NBF2 726 aa12.05□□□□□ -0.48
CHRFAM7A-201ENST00000299847 SIRT3Q9NTG7 399 aaPredicted RBP12.05□□□□□ -0.48
CHRFAM7A-201ENST00000299847 IGHV3-21A0A0B4J1V1 117 aa12.05□□□□□ -0.48
CHRFAM7A-201ENST00000299847 HRKO00198 91 aa12.05□□□□□ -0.48
CHRFAM7A-201ENST00000299847 DHRS2Q13268 280 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms