RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 GGNQ86UU5 652 aa11.85□□□□□ -0.51
CDH8-201ENST00000299345 SSC4DQ8WTU2 575 aa11.85□□□□□ -0.51
CDH8-201ENST00000299345 ARL11Q969Q4 196 aa11.85□□□□□ -0.51
CDH8-201ENST00000299345 TSNAXQ99598 290 aaKnown RBP11.85□□□□□ -0.51
CDH8-201ENST00000299345 AK3Q9UIJ7 227 aa11.85□□□□□ -0.51
CDH8-201ENST00000299345 ADAMTS20P59510 1910 aa11.85□□□□□ -0.51
CDH8-201ENST00000299345 A0A096LPE4 126 aa11.85□□□□□ -0.51
CDH8-201ENST00000299345 A0A1W2PPZ6 126 aa11.85□□□□□ -0.51
CDH8-201ENST00000299345 DBX1A6NMT0 343 aa11.85□□□□□ -0.51
CDH8-201ENST00000299345 MPTX1A8MV57 137 aa11.85□□□□□ -0.51
CDH8-201ENST00000299345 PDCD1Q15116 288 aa11.85□□□□□ -0.51
CDH8-201ENST00000299345 LHFPL1Q86WI0 220 aa11.85□□□□□ -0.51
CDH8-201ENST00000299345 SKA3Q8IX90 412 aa11.85□□□□□ -0.51
CDH8-201ENST00000299345 STPG2Q8N412 459 aa11.85□□□□□ -0.51
CDH8-201ENST00000299345 OR10C1Q96KK4 312 aa11.85□□□□□ -0.51
CDH8-201ENST00000299345 PAPOLGQ9BWT3 736 aaKnown RBP11.85□□□□□ -0.51
CDH8-201ENST00000299345 ZNF286AQ9HBT8 521 aa11.85□□□□□ -0.51
CDH8-201ENST00000299345 TREM1Q9NP99 234 aa11.85□□□□□ -0.51
CDH8-201ENST00000299345 MYO7BQ6PIF6 2116 aa11.85□□□□□ -0.51
CDH8-201ENST00000299345 ZNF816-ZNF321PA0A0X1KG74 233 aa11.85□□□□□ -0.51
CDH8-201ENST00000299345 CA11O75493 328 aa11.85□□□□□ -0.51
CDH8-201ENST00000299345 CD79AP11912 226 aa11.85□□□□□ -0.51
CDH8-201ENST00000299345 AKR1C2P52895 323 aa11.85□□□□□ -0.51
CDH8-201ENST00000299345 AKR1C1Q04828 323 aa11.85□□□□□ -0.51
CDH8-201ENST00000299345 RIPPLY2Q5TAB7 128 aa11.85□□□□□ -0.51
CDH8-201ENST00000299345 RPUSD3Q6P087 351 aaKnown RBP11.85□□□□□ -0.51
CDH8-201ENST00000299345 OR1S2Q8NGQ3 325 aa11.85□□□□□ -0.51
CDH8-201ENST00000299345 HIST1H2AAQ96QV6 131 aa11.85□□□□□ -0.51
CDH8-201ENST00000299345 DEPPQ9NTK1 212 aa11.85□□□□□ -0.51
CDH8-201ENST00000299345 OR5AC2Q9NZP5 309 aa11.85□□□□□ -0.51
CDH8-201ENST00000299345 MYO15AQ9UKN7 3530 aa11.85□□□□□ -0.51
CDH8-201ENST00000299345 USP34Q70CQ2 3546 aa11.84□□□□□ -0.51
CDH8-201ENST00000299345 LRRC3CA6NJW4 275 aa11.84□□□□□ -0.51
CDH8-201ENST00000299345 ZNF705EA8MWA4 302 aaPredicted RBP11.84□□□□□ -0.51
CDH8-201ENST00000299345 GEMIN2O14893 280 aaKnown RBP11.84□□□□□ -0.51
CDH8-201ENST00000299345 XRCC2O43543 280 aa11.84□□□□□ -0.51
CDH8-201ENST00000299345 ZNF205O95201 554 aa11.84□□□□□ -0.51
CDH8-201ENST00000299345 HOXD4P09016 255 aaPredicted RBP11.84□□□□□ -0.51
CDH8-201ENST00000299345 GLI4P10075 376 aa11.84□□□□□ -0.51
CDH8-201ENST00000299345 ACP1P24666 158 aa11.84□□□□□ -0.51
CDH8-201ENST00000299345 ZNF92Q03936 586 aa11.84□□□□□ -0.51
CDH8-201ENST00000299345 SIGLEC14Q08ET2 396 aa11.84□□□□□ -0.51
CDH8-201ENST00000299345 PIGPP57054 158 aa11.84□□□□□ -0.51
CDH8-201ENST00000299345 SUPT4H1P63272 117 aaKnown RBP11.84□□□□□ -0.51
CDH8-201ENST00000299345 PIGYQ3MUY2 71 aa11.84□□□□□ -0.51
CDH8-201ENST00000299345 TSPO2Q5TGU0 170 aa11.84□□□□□ -0.51
CDH8-201ENST00000299345 SLC22A25Q6T423 547 aa11.84□□□□□ -0.51
CDH8-201ENST00000299345 SLC25A26Q70HW3 274 aa11.84□□□□□ -0.51
CDH8-201ENST00000299345 MRPL21Q7Z2W9 205 aaKnown RBP11.84□□□□□ -0.51
CDH8-201ENST00000299345 FAM173AQ9BQD7 235 aa11.84□□□□□ -0.51
CDH8-201ENST00000299345 RNF126Q9BV68 326 aa11.84□□□□□ -0.51
CDH8-201ENST00000299345 SHARPINQ9H0F6 387 aa11.84□□□□□ -0.51
CDH8-201ENST00000299345 WNT5BQ9H1J7 359 aa11.84□□□□□ -0.51
CDH8-201ENST00000299345 ADAMTS9Q9P2N4 1935 aa11.84□□□□□ -0.51
CDH8-201ENST00000299345 IGKV1D-8A0A087WSZ0 117 aa11.84□□□□□ -0.51
CDH8-201ENST00000299345 CEACAM18A8MTB9 384 aa11.84□□□□□ -0.51
CDH8-201ENST00000299345 K7EPK0 472 aa11.84□□□□□ -0.51
CDH8-201ENST00000299345 TDGF1P13385 188 aa11.84□□□□□ -0.51
CDH8-201ENST00000299345 NTF4P34130 210 aa11.84□□□□□ -0.51
CDH8-201ENST00000299345 ARF1P84077 181 aaKnown RBP11.84□□□□□ -0.51
CDH8-201ENST00000299345 PHLDA2Q53GA4 152 aa11.84□□□□□ -0.51
CDH8-201ENST00000299345 PEAR1Q5VY43 1037 aaPredicted RBP11.84□□□□□ -0.51
CDH8-201ENST00000299345 DTX1Q86Y01 620 aa11.84□□□□□ -0.51
CDH8-201ENST00000299345 FAM71E2Q8N5Q1 922 aa11.84□□□□□ -0.51
CDH8-201ENST00000299345 BPIFCQ8NFQ6 507 aa11.84□□□□□ -0.51
CDH8-201ENST00000299345 MRPS24Q96EL2 167 aaKnown RBP11.84□□□□□ -0.51
CDH8-201ENST00000299345 LRRC46Q96FV0 321 aa11.84□□□□□ -0.51
CDH8-201ENST00000299345 WBP1Q96G27 269 aa11.84□□□□□ -0.51
CDH8-201ENST00000299345 GUCD1Q96NT3 240 aa11.84□□□□□ -0.51
CDH8-201ENST00000299345 SYT3Q9BQG1 590 aa11.84□□□□□ -0.51
CDH8-201ENST00000299345 ZNF587BE7ETH6 402 aa11.83□□□□□ -0.52
CDH8-201ENST00000299345 H0YIZ8 118 aa11.83□□□□□ -0.52
CDH8-201ENST00000299345 CTSDP07339 412 aaPredicted RBP11.83□□□□□ -0.52
CDH8-201ENST00000299345 FCGR2CP31995 323 aa11.83□□□□□ -0.52
CDH8-201ENST00000299345 PLP2Q04941 152 aa11.83□□□□□ -0.52
CDH8-201ENST00000299345 EIF4E3Q8N5X7 224 aaKnown RBP11.83□□□□□ -0.52
CDH8-201ENST00000299345 DYRK2Q92630 601 aa11.83□□□□□ -0.52
CDH8-201ENST00000299345 FBXO9Q9UK97 447 aaPredicted RBP11.83□□□□□ -0.52
CDH8-201ENST00000299345 PMS2P1A4D2B8 440 aa11.83□□□□□ -0.52
CDH8-201ENST00000299345 C19orf67A6NJJ6 358 aa11.83□□□□□ -0.52
CDH8-201ENST00000299345 PTGER4P35408 488 aa11.83□□□□□ -0.52
CDH8-201ENST00000299345 SP6Q3SY56 376 aa11.83□□□□□ -0.52
CDH8-201ENST00000299345 ZNF100Q8IYN0 542 aa11.83□□□□□ -0.52
CDH8-201ENST00000299345 SULT4A1Q9BR01 284 aa11.83□□□□□ -0.52
CDH8-201ENST00000299345 LINC01387J3KSC0 135 aa11.83□□□□□ -0.52
CDH8-201ENST00000299345 HGFACQ04756 655 aa11.83□□□□□ -0.52
CDH8-201ENST00000299345 PDZK1IP1Q13113 114 aa11.83□□□□□ -0.52
CDH8-201ENST00000299345 SWI5Q1ZZU3 235 aa11.83□□□□□ -0.52
CDH8-201ENST00000299345 TMEM200AQ86VY9 491 aa11.83□□□□□ -0.52
CDH8-201ENST00000299345 RTN4IP1Q8WWV3 396 aaPredicted RBP11.83□□□□□ -0.52
CDH8-201ENST00000299345 RRNAD1Q96FB5 475 aaKnown RBP11.83□□□□□ -0.52
CDH8-201ENST00000299345 SMIM3Q9BZL3 60 aa11.83□□□□□ -0.52
CDH8-201ENST00000299345 RYDENQ9NUL5 291 aaKnown RBP11.83□□□□□ -0.52
CDH8-201ENST00000299345 PLA2G3Q9NZ20 509 aa11.83□□□□□ -0.52
CDH8-201ENST00000299345 SIGLEC5O15389 551 aa11.82□□□□□ -0.52
CDH8-201ENST00000299345 FAM3AP98173 230 aa11.82□□□□□ -0.52
CDH8-201ENST00000299345 ABLIM2Q6H8Q1 611 aa11.82□□□□□ -0.52
CDH8-201ENST00000299345 HRH4Q9H3N8 390 aa11.82□□□□□ -0.52
CDH8-201ENST00000299345 PINLYPA6NC86 204 aa11.82□□□□□ -0.52
CDH8-201ENST00000299345 MSGN1A6NI15 193 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms