RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 TOXO94900 526 aa12.29□□□□□ -0.44
C9orf3-202ENST00000297979 PLATP00750 562 aa12.29□□□□□ -0.44
C9orf3-202ENST00000297979 CELA3BP08861 270 aa12.29□□□□□ -0.44
C9orf3-202ENST00000297979 CPT2P23786 658 aa12.29□□□□□ -0.44
C9orf3-202ENST00000297979 IDH3GP51553 393 aaPredicted RBP12.29□□□□□ -0.44
C9orf3-202ENST00000297979 TMPRSS3P57727 454 aa12.29□□□□□ -0.44
C9orf3-202ENST00000297979 MRPL49Q13405 166 aaKnown RBP12.29□□□□□ -0.44
C9orf3-202ENST00000297979 RTN4RL2Q86UN3 420 aa12.29□□□□□ -0.44
C9orf3-202ENST00000297979 FTMTQ8N4E7 242 aa12.29□□□□□ -0.44
C9orf3-202ENST00000297979 ZNF610Q8N9Z0 462 aa12.29□□□□□ -0.44
C9orf3-202ENST00000297979 DVL3Q92997 716 aaPredicted RBP12.29□□□□□ -0.44
C9orf3-202ENST00000297979 ST6GAL2Q96JF0 529 aa12.29□□□□□ -0.44
C9orf3-202ENST00000297979 OPN3Q9H1Y3 402 aaPredicted RBP12.29□□□□□ -0.44
C9orf3-202ENST00000297979 J3QW42 95 aa12.28□□□□□ -0.44
C9orf3-202ENST00000297979 ANGPTL7O43827 346 aa12.28□□□□□ -0.44
C9orf3-202ENST00000297979 NDUFB6O95139 128 aa12.28□□□□□ -0.44
C9orf3-202ENST00000297979 CST4P01036 141 aa12.28□□□□□ -0.44
C9orf3-202ENST00000297979 RRAS2P62070 204 aaPredicted RBP12.28□□□□□ -0.44
C9orf3-202ENST00000297979 PRDX4Q13162 271 aa12.28□□□□□ -0.44
C9orf3-202ENST00000297979 RSU1Q15404 277 aa12.28□□□□□ -0.44
C9orf3-202ENST00000297979 ATAD3CQ5T2N8 411 aa12.28□□□□□ -0.44
C9orf3-202ENST00000297979 MYPOPQ86VE0 399 aaPredicted RBP12.28□□□□□ -0.44
C9orf3-202ENST00000297979 FAM57AQ8TBR7 257 aa12.28□□□□□ -0.44
C9orf3-202ENST00000297979 OR10A4Q9H209 315 aa12.28□□□□□ -0.44
C9orf3-202ENST00000297979 OR51B6Q9H340 312 aa12.28□□□□□ -0.44
C9orf3-202ENST00000297979 CDH20Q9HBT6 801 aa12.28□□□□□ -0.44
C9orf3-202ENST00000297979 FLVCR2Q9UPI3 526 aa12.28□□□□□ -0.44
C9orf3-202ENST00000297979 FAM172BPA6NC97 362 aa12.28□□□□□ -0.44
C9orf3-202ENST00000297979 A8MV72 311 aaPredicted RBP12.28□□□□□ -0.44
C9orf3-202ENST00000297979 ZNF736B4DX44 427 aaPredicted RBP12.28□□□□□ -0.44
C9orf3-202ENST00000297979 TSPAN4O14817 238 aa12.28□□□□□ -0.44
C9orf3-202ENST00000297979 TMEM50BP56557 158 aa12.28□□□□□ -0.44
C9orf3-202ENST00000297979 FAM76BQ5HYJ3 339 aa12.28□□□□□ -0.44
C9orf3-202ENST00000297979 ASCL4Q6XD76 172 aa12.28□□□□□ -0.44
C9orf3-202ENST00000297979 CXorf67Q86X51 503 aaPredicted RBP12.28□□□□□ -0.44
C9orf3-202ENST00000297979 NAXEQ8NCW5 288 aa12.28□□□□□ -0.44
C9orf3-202ENST00000297979 WBP1Q96G27 269 aa12.28□□□□□ -0.44
C9orf3-202ENST00000297979 PARD6GQ9BYG4 376 aaPredicted RBP12.28□□□□□ -0.44
C9orf3-202ENST00000297979 ZNF71Q9NQZ8 489 aaPredicted RBP12.28□□□□□ -0.44
C9orf3-202ENST00000297979 KCNK7Q9Y2U2 307 aa12.28□□□□□ -0.44
C9orf3-202ENST00000297979 CD300LBA8K4G0 201 aa12.27□□□□□ -0.44
C9orf3-202ENST00000297979 FOXI3A8MTJ6 420 aaPredicted RBP12.27□□□□□ -0.44
C9orf3-202ENST00000297979 DLL1O00548 723 aa12.27□□□□□ -0.44
C9orf3-202ENST00000297979 MFNGO00587 321 aa12.27□□□□□ -0.44
C9orf3-202ENST00000297979 ARPC1BO15143 372 aaKnown RBP12.27□□□□□ -0.44
C9orf3-202ENST00000297979 ZNF780AO75290 641 aaPredicted RBP12.27□□□□□ -0.44
C9orf3-202ENST00000297979 SCO1O75880 301 aa12.27□□□□□ -0.44
C9orf3-202ENST00000297979 RAB3DO95716 219 aa12.27□□□□□ -0.44
C9orf3-202ENST00000297979 IL2RAP01589 272 aa12.27□□□□□ -0.44
C9orf3-202ENST00000297979 CSTBP04080 98 aaKnown RBP12.27□□□□□ -0.44
C9orf3-202ENST00000297979 UCNP55089 124 aa12.27□□□□□ -0.44
C9orf3-202ENST00000297979 RBMS2Q15434 407 aaKnown RBP12.27□□□□□ -0.44
C9orf3-202ENST00000297979 PNLIPRP3Q17RR3 467 aa12.27□□□□□ -0.44
C9orf3-202ENST00000297979 ZDHHC23Q8IYP9 409 aa12.27□□□□□ -0.44
C9orf3-202ENST00000297979 C17orf78Q8N4C9 275 aa12.27□□□□□ -0.44
C9orf3-202ENST00000297979 Q8NA96 180 aa12.27□□□□□ -0.44
C9orf3-202ENST00000297979 ARHGAP5-AS1Q96IT6 56 aa12.27□□□□□ -0.44
C9orf3-202ENST00000297979 IFT46Q9NQC8 304 aa12.27□□□□□ -0.44
C9orf3-202ENST00000297979 EIF3KQ9UBQ5 218 aaKnown RBP12.27□□□□□ -0.44
C9orf3-202ENST00000297979 ACACAQ13085 2346 aa12.27□□□□□ -0.45
C9orf3-202ENST00000297979 HSBP1L1C9JCN9 74 aa12.27□□□□□ -0.45
C9orf3-202ENST00000297979 HTR3BO95264 441 aa12.27□□□□□ -0.45
C9orf3-202ENST00000297979 CD74P04233 296 aa12.27□□□□□ -0.45
C9orf3-202ENST00000297979 CBR1P16152 277 aa12.27□□□□□ -0.45
C9orf3-202ENST00000297979 TIMP3P35625 211 aa12.27□□□□□ -0.45
C9orf3-202ENST00000297979 PDZK1IP1Q13113 114 aa12.27□□□□□ -0.45
C9orf3-202ENST00000297979 P2RY6Q15077 328 aa12.27□□□□□ -0.45
C9orf3-202ENST00000297979 RPRMLQ8N4K4 120 aa12.27□□□□□ -0.45
C9orf3-202ENST00000297979 WDR31Q8NA23 367 aa12.27□□□□□ -0.45
C9orf3-202ENST00000297979 PXT1Q8NFP0 134 aa12.27□□□□□ -0.45
C9orf3-202ENST00000297979 OR51S1Q8NGJ8 323 aa12.27□□□□□ -0.45
C9orf3-202ENST00000297979 FBXW5Q969U6 566 aa12.27□□□□□ -0.45
C9orf3-202ENST00000297979 Q96M66 194 aa12.27□□□□□ -0.45
C9orf3-202ENST00000297979 GPR61Q9BZJ8 451 aa12.27□□□□□ -0.45
C9orf3-202ENST00000297979 CRIM1Q9NZV1 1036 aa12.27□□□□□ -0.45
C9orf3-202ENST00000297979 MEX3AA1L020 520 aaKnown RBP12.26□□□□□ -0.45
C9orf3-202ENST00000297979 B9A039 149 aa12.26□□□□□ -0.45
C9orf3-202ENST00000297979 BLVRBP30043 206 aaPredicted RBP12.26□□□□□ -0.45
C9orf3-202ENST00000297979 OR3A3P47888 321 aa12.26□□□□□ -0.45
C9orf3-202ENST00000297979 HABP2Q14520 560 aaPredicted RBP12.26□□□□□ -0.45
C9orf3-202ENST00000297979 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.26□□□□□ -0.45
C9orf3-202ENST00000297979 IL36GQ9NZH8 169 aa12.26□□□□□ -0.45
C9orf3-202ENST00000297979 SVILO95425 2214 aa12.26□□□□□ -0.45
C9orf3-202ENST00000297979 MGAQ8IWI9 3026 aa12.26□□□□□ -0.45
C9orf3-202ENST00000297979 PQLC2LA1A4F0 135 aa12.26□□□□□ -0.45
C9orf3-202ENST00000297979 M0QYG6 137 aa12.26□□□□□ -0.45
C9orf3-202ENST00000297979 PRAF2O60831 178 aa12.26□□□□□ -0.45
C9orf3-202ENST00000297979 HOXD4P09016 255 aaPredicted RBP12.26□□□□□ -0.45
C9orf3-202ENST00000297979 TDGF1P3P51864 188 aa12.26□□□□□ -0.45
C9orf3-202ENST00000297979 CEACAM21Q3KPI0 293 aa12.26□□□□□ -0.45
C9orf3-202ENST00000297979 SAPCD1Q5SSQ6 148 aa12.26□□□□□ -0.45
C9orf3-202ENST00000297979 DMRTC2Q8IXT2 367 aaPredicted RBP12.26□□□□□ -0.45
C9orf3-202ENST00000297979 GVQW1Q8N7I0 195 aa12.26□□□□□ -0.45
C9orf3-202ENST00000297979 OR4S1Q8NGB4 309 aa12.26□□□□□ -0.45
C9orf3-202ENST00000297979 HPSE2Q8WWQ2 592 aa12.26□□□□□ -0.45
C9orf3-202ENST00000297979 CITED4Q96RK1 184 aa12.26□□□□□ -0.45
C9orf3-202ENST00000297979 GINS4Q9BRT9 223 aa12.26□□□□□ -0.45
C9orf3-202ENST00000297979 OR51J1Q9H342 316 aa12.26□□□□□ -0.45
C9orf3-202ENST00000297979 IGKV1-12A0A0C4DH73 117 aa12.25□□□□□ -0.45
C9orf3-202ENST00000297979 ANKRD30BLA7E2S9 258 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms