RNA–Protein interactions for RNA: ENST00000297615.9

TTC39B-201, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-201ENST00000297615 CBLN2Q8IUK8 224 aa11.78□□□□□ -0.52
TTC39B-201ENST00000297615 OR5T2Q8NGG2 359 aa11.78□□□□□ -0.52
TTC39B-201ENST00000297615 OR14K1Q8NGZ2 314 aa11.78□□□□□ -0.52
TTC39B-201ENST00000297615 PSMF1Q92530 271 aa11.78□□□□□ -0.52
TTC39B-201ENST00000297615 C1orf147Q96MC9 270 aaPredicted RBP11.78□□□□□ -0.52
TTC39B-201ENST00000297615 NAA11Q9BSU3 229 aaPredicted RBP11.78□□□□□ -0.52
TTC39B-201ENST00000297615 LRRC3CA6NJW4 275 aa11.78□□□□□ -0.52
TTC39B-201ENST00000297615 DHRS7CA6NNS2 312 aa11.78□□□□□ -0.52
TTC39B-201ENST00000297615 F8W036 122 aa11.78□□□□□ -0.52
TTC39B-201ENST00000297615 MRPL33O75394 65 aaKnown RBP11.78□□□□□ -0.52
TTC39B-201ENST00000297615 RAC1P63000 192 aa11.78□□□□□ -0.52
TTC39B-201ENST00000297615 BLOC1S1P78537 153 aa11.78□□□□□ -0.52
TTC39B-201ENST00000297615 PABPC1L2AQ5JQF8 200 aa11.78□□□□□ -0.52
TTC39B-201ENST00000297615 HOGA1Q86XE5 327 aa11.78□□□□□ -0.52
TTC39B-201ENST00000297615 SULF2Q8IWU5 870 aa11.78□□□□□ -0.52
TTC39B-201ENST00000297615 OR5AP2Q8NGF4 316 aa11.78□□□□□ -0.52
TTC39B-201ENST00000297615 FOXB1Q99853 325 aa11.78□□□□□ -0.52
TTC39B-201ENST00000297615 LIPGQ9Y5X9 500 aa11.78□□□□□ -0.52
TTC39B-201ENST00000297615 A0A0A6YYH2 397 aa11.78□□□□□ -0.52
TTC39B-201ENST00000297615 A6NJ64 397 aa11.78□□□□□ -0.52
TTC39B-201ENST00000297615 M0R296 226 aa11.78□□□□□ -0.52
TTC39B-201ENST00000297615 XRCC2O43543 280 aa11.78□□□□□ -0.52
TTC39B-201ENST00000297615 DIRAS3O95661 229 aa11.78□□□□□ -0.52
TTC39B-201ENST00000297615 CD8AP01732 235 aa11.78□□□□□ -0.52
TTC39B-201ENST00000297615 ARF1P84077 181 aaKnown RBP11.78□□□□□ -0.52
TTC39B-201ENST00000297615 HNF4GQ14541 408 aa11.78□□□□□ -0.52
TTC39B-201ENST00000297615 OR1C1Q15619 314 aa11.78□□□□□ -0.52
TTC39B-201ENST00000297615 OR2A2Q6IF42 318 aa11.78□□□□□ -0.52
TTC39B-201ENST00000297615 FBXL14Q8N1E6 418 aa11.78□□□□□ -0.52
TTC39B-201ENST00000297615 MARVELD3Q96A59 401 aa11.78□□□□□ -0.52
TTC39B-201ENST00000297615 IGKV1-27A0A075B6S5 117 aa11.77□□□□□ -0.53
TTC39B-201ENST00000297615 ZNF503-AS2A6NEH8 195 aa11.77□□□□□ -0.53
TTC39B-201ENST00000297615 CHRM2P08172 466 aa11.77□□□□□ -0.53
TTC39B-201ENST00000297615 SP9P0CG40 484 aa11.77□□□□□ -0.53
TTC39B-201ENST00000297615 ZNF273Q14593 569 aa11.77□□□□□ -0.53
TTC39B-201ENST00000297615 IAH1Q2TAA2 248 aaPredicted RBP11.77□□□□□ -0.53
TTC39B-201ENST00000297615 PLCXD3Q63HM9 321 aa11.77□□□□□ -0.53
TTC39B-201ENST00000297615 CPEB3Q8NE35 698 aaKnown RBP11.77□□□□□ -0.53
TTC39B-201ENST00000297615 NABP1Q96AH0 204 aa11.77□□□□□ -0.53
TTC39B-201ENST00000297615 RBMXL1Q96E39 390 aaKnown RBP11.77□□□□□ -0.53
TTC39B-201ENST00000297615 SLC25A32Q9H2D1 315 aa11.77□□□□□ -0.53
TTC39B-201ENST00000297615 A0A1B0GW55 424 aa11.77□□□□□ -0.53
TTC39B-201ENST00000297615 F8VVB4 439 aa11.77□□□□□ -0.53
TTC39B-201ENST00000297615 F8VWA3 439 aa11.77□□□□□ -0.53
TTC39B-201ENST00000297615 NKX2-8O15522 239 aa11.77□□□□□ -0.53
TTC39B-201ENST00000297615 TNFSF12O43508 249 aa11.77□□□□□ -0.53
TTC39B-201ENST00000297615 TFF1P04155 84 aa11.77□□□□□ -0.53
TTC39B-201ENST00000297615 DUX4L2P0CJ85 424 aa11.77□□□□□ -0.53
TTC39B-201ENST00000297615 DUX4L3P0CJ86 424 aa11.77□□□□□ -0.53
TTC39B-201ENST00000297615 DUX4L4P0CJ87 422 aa11.77□□□□□ -0.53
TTC39B-201ENST00000297615 DUX4L5P0CJ88 424 aa11.77□□□□□ -0.53
TTC39B-201ENST00000297615 DUX4L6P0CJ89 424 aa11.77□□□□□ -0.53
TTC39B-201ENST00000297615 DUX4L7P0CJ90 424 aa11.77□□□□□ -0.53
TTC39B-201ENST00000297615 SUPT4H1P63272 117 aaKnown RBP11.77□□□□□ -0.53
TTC39B-201ENST00000297615 H3F3AP84243 136 aa11.77□□□□□ -0.53
TTC39B-201ENST00000297615 HIKESHIQ53FT3 197 aa11.77□□□□□ -0.53
TTC39B-201ENST00000297615 ZDHHC22Q8N966 263 aa11.77□□□□□ -0.53
TTC39B-201ENST00000297615 SEMA6DQ8NFY4 1073 aa11.77□□□□□ -0.53
TTC39B-201ENST00000297615 RNF126Q9BV68 326 aa11.77□□□□□ -0.53
TTC39B-201ENST00000297615 PECRQ9BY49 303 aa11.77□□□□□ -0.53
TTC39B-201ENST00000297615 SLC26A1Q9H2B4 701 aa11.77□□□□□ -0.53
TTC39B-201ENST00000297615 DUX4Q9UBX2 424 aa11.77□□□□□ -0.53
TTC39B-201ENST00000297615 FZR1Q9UM11 496 aa11.77□□□□□ -0.53
TTC39B-201ENST00000297615 A0A1W2PNV4 684 aa11.76□□□□□ -0.53
TTC39B-201ENST00000297615 TTLL8A6PVC2 850 aa11.76□□□□□ -0.53
TTC39B-201ENST00000297615 ACTL6AO96019 429 aa11.76□□□□□ -0.53
TTC39B-201ENST00000297615 TDGF1P13385 188 aa11.76□□□□□ -0.53
TTC39B-201ENST00000297615 RPL7L1Q6DKI1 246 aaKnown RBP11.76□□□□□ -0.53
TTC39B-201ENST00000297615 SLC25A26Q70HW3 274 aa11.76□□□□□ -0.53
TTC39B-201ENST00000297615 C17orf78Q8N4C9 275 aa11.76□□□□□ -0.53
TTC39B-201ENST00000297615 SLC25A43Q8WUT9 341 aaPredicted RBP11.76□□□□□ -0.53
TTC39B-201ENST00000297615 RTBDNQ9BSG5 229 aaPredicted RBP11.76□□□□□ -0.53
TTC39B-201ENST00000297615 C14orf166Q9Y224 244 aaKnown RBP11.76□□□□□ -0.53
TTC39B-201ENST00000297615 MED12LQ86YW9 2145 aa11.76□□□□□ -0.53
TTC39B-201ENST00000297615 CDX4O14627 284 aaPredicted RBP11.76□□□□□ -0.53
TTC39B-201ENST00000297615 ABCD4O14678 606 aa11.76□□□□□ -0.53
TTC39B-201ENST00000297615 GP1BAP07359 652 aa11.76□□□□□ -0.53
TTC39B-201ENST00000297615 PDSS1Q5T2R2 415 aa11.76□□□□□ -0.53
TTC39B-201ENST00000297615 TMEM164Q5U3C3 297 aa11.76□□□□□ -0.53
TTC39B-201ENST00000297615 OVCH2Q7RTZ1 564 aa11.76□□□□□ -0.53
TTC39B-201ENST00000297615 HSD17B13Q7Z5P4 300 aaPredicted RBP11.76□□□□□ -0.53
TTC39B-201ENST00000297615 GGNQ86UU5 652 aa11.76□□□□□ -0.53
TTC39B-201ENST00000297615 BAP18Q8IXM2 172 aa11.76□□□□□ -0.53
TTC39B-201ENST00000297615 DEFB124Q8NES8 71 aa11.76□□□□□ -0.53
TTC39B-201ENST00000297615 OR5L1Q8NGL2 311 aa11.76□□□□□ -0.53
TTC39B-201ENST00000297615 BORCS8Q96FH0 119 aa11.76□□□□□ -0.53
TTC39B-201ENST00000297615 WDR54Q9H977 334 aa11.76□□□□□ -0.53
TTC39B-201ENST00000297615 GPR132Q9UNW8 380 aa11.76□□□□□ -0.53
TTC39B-201ENST00000297615 LILRA1O75019 489 aa11.75□□□□□ -0.53
TTC39B-201ENST00000297615 LRP3O75074 770 aa11.75□□□□□ -0.53
TTC39B-201ENST00000297615 MEX3BQ6ZN04 569 aaKnown RBP11.75□□□□□ -0.53
TTC39B-201ENST00000297615 CALHM1Q8IU99 346 aa11.75□□□□□ -0.53
TTC39B-201ENST00000297615 TMEM123Q8N131 208 aa11.75□□□□□ -0.53
TTC39B-201ENST00000297615 SUMF1Q8NBK3 374 aa11.75□□□□□ -0.53
TTC39B-201ENST00000297615 MARC2Q969Z3 335 aa11.75□□□□□ -0.53
TTC39B-201ENST00000297615 NKX6-2Q9C056 277 aaPredicted RBP11.75□□□□□ -0.53
TTC39B-201ENST00000297615 STRADBQ9C0K7 418 aa11.75□□□□□ -0.53
TTC39B-201ENST00000297615 LOC102723996A0A087X1L8 192 aa11.75□□□□□ -0.53
TTC39B-201ENST00000297615 MFNGO00587 321 aa11.75□□□□□ -0.53
TTC39B-201ENST00000297615 BET1O15155 118 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms