RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 FAM173AQ9BQD7 235 aa10.2□□□□□ -0.78
RHO-201ENST00000296271 ZNF2Q9BSG1 426 aaPredicted RBP10.2□□□□□ -0.78
RHO-201ENST00000296271 DEFB127Q9H1M4 99 aa10.2□□□□□ -0.78
RHO-201ENST00000296271 C12orf49Q9H741 205 aa10.2□□□□□ -0.78
RHO-201ENST00000296271 BOKQ9UMX3 212 aaPredicted RBP10.2□□□□□ -0.78
RHO-201ENST00000296271 CACNA1GO43497 2377 aa10.19□□□□□ -0.78
RHO-201ENST00000296271 ESPL1Q14674 2120 aa10.19□□□□□ -0.78
RHO-201ENST00000296271 LILRA1O75019 489 aa10.19□□□□□ -0.78
RHO-201ENST00000296271 SP6Q3SY56 376 aa10.19□□□□□ -0.78
RHO-201ENST00000296271 PLCXD3Q63HM9 321 aa10.19□□□□□ -0.78
RHO-201ENST00000296271 MED12LQ86YW9 2145 aa10.19□□□□□ -0.78
RHO-201ENST00000296271 SLC38A6Q8IZM9 456 aa10.19□□□□□ -0.78
RHO-201ENST00000296271 KCNRGQ8N5I3 272 aa10.19□□□□□ -0.78
RHO-201ENST00000296271 OR10AD1Q8NGE0 317 aa10.19□□□□□ -0.78
RHO-201ENST00000296271 CDC6Q99741 560 aa10.19□□□□□ -0.78
RHO-201ENST00000296271 CHMP1AQ9HD42 196 aaPredicted RBP10.19□□□□□ -0.78
RHO-201ENST00000296271 GSKIPQ9P0R6 139 aa10.19□□□□□ -0.78
RHO-201ENST00000296271 KIF25Q9UIL4 384 aa10.19□□□□□ -0.78
RHO-201ENST00000296271 C5orf49A4QMS7 147 aa10.19□□□□□ -0.78
RHO-201ENST00000296271 DNPH1O43598 174 aa10.19□□□□□ -0.78
RHO-201ENST00000296271 SFT2D2O95562 160 aa10.19□□□□□ -0.78
RHO-201ENST00000296271 CRHP06850 196 aa10.19□□□□□ -0.78
RHO-201ENST00000296271 ZNF883P0CG24 379 aa10.19□□□□□ -0.78
RHO-201ENST00000296271 RBP2P50120 134 aa10.19□□□□□ -0.78
RHO-201ENST00000296271 PMP22Q01453 160 aa10.19□□□□□ -0.78
RHO-201ENST00000296271 PLGLB1Q02325 96 aa10.19□□□□□ -0.78
RHO-201ENST00000296271 SRSF4Q08170 494 aaKnown RBP10.19□□□□□ -0.78
RHO-201ENST00000296271 SPEM2Q0P670 501 aa10.19□□□□□ -0.78
RHO-201ENST00000296271 KRTAP27-1Q3LI81 207 aa10.19□□□□□ -0.78
RHO-201ENST00000296271 PEG10Q86TG7 708 aaKnown RBP10.19□□□□□ -0.78
RHO-201ENST00000296271 SLC51BQ86UW2 128 aa10.19□□□□□ -0.78
RHO-201ENST00000296271 ARRDC1Q8N5I2 433 aa10.19□□□□□ -0.78
RHO-201ENST00000296271 ANGPTL6Q8NI99 470 aa10.19□□□□□ -0.78
RHO-201ENST00000296271 DCUN1D4Q92564 292 aa10.19□□□□□ -0.78
RHO-201ENST00000296271 TOMM40LQ969M1 308 aa10.19□□□□□ -0.78
RHO-201ENST00000296271 AKAP13Q12802 2813 aa10.18□□□□□ -0.78
RHO-201ENST00000296271 SHOXO15266 292 aa10.18□□□□□ -0.78
RHO-201ENST00000296271 CD79AP11912 226 aa10.18□□□□□ -0.78
RHO-201ENST00000296271 HLA-GP17693 338 aa10.18□□□□□ -0.78
RHO-201ENST00000296271 C4BPBP20851 252 aa10.18□□□□□ -0.78
RHO-201ENST00000296271 DUSP1P28562 367 aa10.18□□□□□ -0.78
RHO-201ENST00000296271 RBMXP38159 391 aaKnown RBP10.18□□□□□ -0.78
RHO-201ENST00000296271 FXYD4P59646 89 aa10.18□□□□□ -0.78
RHO-201ENST00000296271 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.18□□□□□ -0.78
RHO-201ENST00000296271 TMEM17Q86X19 198 aa10.18□□□□□ -0.78
RHO-201ENST00000296271 GPHA2Q96T91 129 aa10.18□□□□□ -0.78
RHO-201ENST00000296271 METTL9Q9H1A3 318 aa10.18□□□□□ -0.78
RHO-201ENST00000296271 PRSS50Q9UI38 385 aa10.18□□□□□ -0.78
RHO-201ENST00000296271 A0A0B4J2A0 478 aa10.18□□□□□ -0.78
RHO-201ENST00000296271 A0A1W2PR80 420 aa10.18□□□□□ -0.78
RHO-201ENST00000296271 HSPB6O14558 160 aa10.18□□□□□ -0.78
RHO-201ENST00000296271 TBPP20226 339 aa10.18□□□□□ -0.78
RHO-201ENST00000296271 FPR2P25090 351 aa10.18□□□□□ -0.78
RHO-201ENST00000296271 PSMB6P28072 239 aa10.18□□□□□ -0.78
RHO-201ENST00000296271 PDSS1Q5T2R2 415 aa10.18□□□□□ -0.78
RHO-201ENST00000296271 ELP2Q6IA86 826 aa10.18□□□□□ -0.78
RHO-201ENST00000296271 CLEC9AQ6UXN8 241 aa10.18□□□□□ -0.78
RHO-201ENST00000296271 SLC25A26Q70HW3 274 aa10.18□□□□□ -0.78
RHO-201ENST00000296271 IL22RA1Q8N6P7 574 aa10.18□□□□□ -0.78
RHO-201ENST00000296271 OR56B2PQ8NGI1 322 aa10.18□□□□□ -0.78
RHO-201ENST00000296271 ZPBPQ9BS86 351 aa10.18□□□□□ -0.78
RHO-201ENST00000296271 METTL8Q9H825 291 aaKnown RBP10.18□□□□□ -0.78
RHO-201ENST00000296271 SHPKQ9UHJ6 478 aa10.18□□□□□ -0.78
RHO-201ENST00000296271 ST3GAL6Q9Y274 331 aa10.18□□□□□ -0.78
RHO-201ENST00000296271 SMG1Q96Q15 3661 aaKnown RBP10.17□□□□□ -0.78
RHO-201ENST00000296271 IGHV3-64DA0A0J9YX35 117 aa10.17□□□□□ -0.78
RHO-201ENST00000296271 ARGFXA6NJG6 315 aa10.17□□□□□ -0.78
RHO-201ENST00000296271 F5H0A9 414 aaPredicted RBP10.17□□□□□ -0.78
RHO-201ENST00000296271 APOC1P02654 83 aa10.17□□□□□ -0.78
RHO-201ENST00000296271 SLC25A4P12235 298 aa10.17□□□□□ -0.78
RHO-201ENST00000296271 ZNF708P17019 499 aa10.17□□□□□ -0.78
RHO-201ENST00000296271 MEOX1P50221 254 aa10.17□□□□□ -0.78
RHO-201ENST00000296271 ARPC4P59998 168 aa10.17□□□□□ -0.78
RHO-201ENST00000296271 RAB32Q13637 225 aa10.17□□□□□ -0.78
RHO-201ENST00000296271 HIKESHIQ53FT3 197 aa10.17□□□□□ -0.78
RHO-201ENST00000296271 TMEM164Q5U3C3 297 aa10.17□□□□□ -0.78
RHO-201ENST00000296271 TMEM42Q69YG0 159 aa10.17□□□□□ -0.78
RHO-201ENST00000296271 TMEM185AQ8NFB2 350 aa10.17□□□□□ -0.78
RHO-201ENST00000296271 THAP6Q8TBB0 222 aa10.17□□□□□ -0.78
RHO-201ENST00000296271 CMSS1Q9BQ75 279 aaKnown RBP10.17□□□□□ -0.78
RHO-201ENST00000296271 PAPOLGQ9BWT3 736 aaKnown RBP10.17□□□□□ -0.78
RHO-201ENST00000296271 GHRLQ9UBU3 117 aa10.17□□□□□ -0.78
RHO-201ENST00000296271 ZFHX2Q9C0A1 2572 aaPredicted RBP10.17□□□□□ -0.78
RHO-201ENST00000296271 KANTRA0A1W2PQU2 76 aa10.17□□□□□ -0.78
RHO-201ENST00000296271 SERPINE3A8MV23 424 aa10.17□□□□□ -0.78
RHO-201ENST00000296271 BCL2L11O43521 198 aa10.17□□□□□ -0.78
RHO-201ENST00000296271 CHATP28329 748 aa10.17□□□□□ -0.78
RHO-201ENST00000296271 AKR1C2P52895 323 aa10.17□□□□□ -0.78
RHO-201ENST00000296271 AKR1C1Q04828 323 aa10.17□□□□□ -0.78
RHO-201ENST00000296271 PDZK1IP1Q13113 114 aa10.17□□□□□ -0.78
RHO-201ENST00000296271 RIPPLY2Q5TAB7 128 aa10.17□□□□□ -0.78
RHO-201ENST00000296271 FAHD2BQ6P2I3 314 aaPredicted RBP10.17□□□□□ -0.78
RHO-201ENST00000296271 ACOT7LQ6ZUV0 252 aa10.17□□□□□ -0.78
RHO-201ENST00000296271 SPSB1Q96BD6 273 aa10.17□□□□□ -0.78
RHO-201ENST00000296271 FAHD2AQ96GK7 314 aa10.17□□□□□ -0.78
RHO-201ENST00000296271 ZNF488Q96MN9 340 aa10.17□□□□□ -0.78
RHO-201ENST00000296271 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.17□□□□□ -0.78
RHO-201ENST00000296271 STARD10Q9Y365 291 aa10.17□□□□□ -0.78
RHO-201ENST00000296271 ARHGAP21Q5T5U3 1957 aa10.16□□□□□ -0.78
RHO-201ENST00000296271 GVINP1Q7Z2Y8 2422 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms