RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 PRR13Q9NZ81 148 aa10.48□□□□□ -0.73
SNIP1-201ENST00000296215 IGHV1-69-2A0A0G2JMI3 117 aa10.48□□□□□ -0.73
SNIP1-201ENST00000296215 SNCGO76070 127 aa10.48□□□□□ -0.73
SNIP1-201ENST00000296215 FCGR3AP08637 254 aa10.48□□□□□ -0.73
SNIP1-201ENST00000296215 FAM87AP0C7U9 286 aa10.48□□□□□ -0.73
SNIP1-201ENST00000296215 CTXN1P60606 82 aa10.48□□□□□ -0.73
SNIP1-201ENST00000296215 C17orf67Q0P5P2 114 aa10.48□□□□□ -0.73
SNIP1-201ENST00000296215 SHBQ15464 509 aa10.48□□□□□ -0.73
SNIP1-201ENST00000296215 METTL7BQ6UX53 244 aa10.48□□□□□ -0.73
SNIP1-201ENST00000296215 SLC36A1Q7Z2H8 476 aa10.48□□□□□ -0.73
SNIP1-201ENST00000296215 MRPL21Q7Z2W9 205 aaKnown RBP10.48□□□□□ -0.73
SNIP1-201ENST00000296215 TMEM255BQ8WV15 326 aa10.48□□□□□ -0.73
SNIP1-201ENST00000296215 SPSB1Q96BD6 273 aa10.48□□□□□ -0.73
SNIP1-201ENST00000296215 SLC45A2Q9UMX9 530 aa10.48□□□□□ -0.73
SNIP1-201ENST00000296215 TBL2Q9Y4P3 447 aaKnown RBP10.48□□□□□ -0.73
SNIP1-201ENST00000296215 A0A0G2JMM0 328 aa10.48□□□□□ -0.73
SNIP1-201ENST00000296215 A0A1W2PPB8 328 aa10.48□□□□□ -0.73
SNIP1-201ENST00000296215 C7orf71A4D174 169 aa10.48□□□□□ -0.73
SNIP1-201ENST00000296215 KIR3DP1A8MWS1 328 aa10.48□□□□□ -0.73
SNIP1-201ENST00000296215 ABHD16AO95870 558 aa10.48□□□□□ -0.73
SNIP1-201ENST00000296215 CCSMST1Q4G0I0 132 aa10.48□□□□□ -0.73
SNIP1-201ENST00000296215 PDLIM3Q53GG5 364 aaPredicted RBP10.48□□□□□ -0.73
SNIP1-201ENST00000296215 CMC2Q9NRP2 79 aa10.48□□□□□ -0.73
SNIP1-201ENST00000296215 FOXD3Q9UJU5 478 aaPredicted RBP10.48□□□□□ -0.73
SNIP1-201ENST00000296215 A0A1W2PPC1 479 aa10.47□□□□□ -0.73
SNIP1-201ENST00000296215 DDTLA6NHG4 134 aaPredicted RBP10.47□□□□□ -0.73
SNIP1-201ENST00000296215 SLC6A9P48067 706 aa10.47□□□□□ -0.73
SNIP1-201ENST00000296215 SNU13P55769 128 aaKnown RBP10.47□□□□□ -0.73
SNIP1-201ENST00000296215 DUSP2Q05923 314 aa10.47□□□□□ -0.73
SNIP1-201ENST00000296215 TIGITQ495A1 244 aa10.47□□□□□ -0.73
SNIP1-201ENST00000296215 LINC00696Q6ZRV3 163 aa10.47□□□□□ -0.73
SNIP1-201ENST00000296215 OR10G8Q8NGN5 311 aa10.47□□□□□ -0.73
SNIP1-201ENST00000296215 KLK6Q92876 244 aa10.47□□□□□ -0.73
SNIP1-201ENST00000296215 NEIL1Q96FI4 390 aaPredicted RBP10.47□□□□□ -0.73
SNIP1-201ENST00000296215 COL25A1Q9BXS0 654 aaPredicted RBP10.47□□□□□ -0.73
SNIP1-201ENST00000296215 PRSS16Q9NQE7 514 aa10.47□□□□□ -0.73
SNIP1-201ENST00000296215 ADGRB1O14514 1584 aa10.47□□□□□ -0.73
SNIP1-201ENST00000296215 A0A0U1RQF3 1178 aa10.47□□□□□ -0.73
SNIP1-201ENST00000296215 GRXCR1A8MXD5 290 aa10.47□□□□□ -0.73
SNIP1-201ENST00000296215 H0Y980 276 aa10.47□□□□□ -0.73
SNIP1-201ENST00000296215 ALOX12BO75342 701 aa10.47□□□□□ -0.73
SNIP1-201ENST00000296215 BCL2P10415 239 aa10.47□□□□□ -0.73
SNIP1-201ENST00000296215 FBXL22Q6P050 247 aa10.47□□□□□ -0.73
SNIP1-201ENST00000296215 MRGPRGQ86SM5 289 aa10.47□□□□□ -0.73
SNIP1-201ENST00000296215 OR6C1Q96RD1 312 aa10.47□□□□□ -0.73
SNIP1-201ENST00000296215 ZNF442Q9H7R0 627 aa10.47□□□□□ -0.73
SNIP1-201ENST00000296215 EVPLQ92817 2033 aa10.47□□□□□ -0.73
SNIP1-201ENST00000296215 A0A1B0GWB2 263 aa10.47□□□□□ -0.73
SNIP1-201ENST00000296215 PPIAL4DF5H284 164 aa10.47□□□□□ -0.73
SNIP1-201ENST00000296215 MSCO60682 206 aa10.47□□□□□ -0.73
SNIP1-201ENST00000296215 RPL13AP40429 203 aaKnown RBP10.47□□□□□ -0.73
SNIP1-201ENST00000296215 GNG4P50150 75 aa10.47□□□□□ -0.73
SNIP1-201ENST00000296215 MFAP4P55083 255 aa10.47□□□□□ -0.73
SNIP1-201ENST00000296215 KCNMB1Q16558 191 aa10.47□□□□□ -0.73
SNIP1-201ENST00000296215 C1orf122Q6ZSJ8 110 aa10.47□□□□□ -0.73
SNIP1-201ENST00000296215 ST6GALNAC6Q969X2 333 aa10.47□□□□□ -0.73
SNIP1-201ENST00000296215 ANKRD9Q96BM1 317 aaPredicted RBP10.47□□□□□ -0.73
SNIP1-201ENST00000296215 CHRNA10Q9GZZ6 450 aa10.47□□□□□ -0.73
SNIP1-201ENST00000296215 A4GALTQ9NPC4 353 aa10.47□□□□□ -0.73
SNIP1-201ENST00000296215 HS3ST3B1Q9Y662 390 aa10.47□□□□□ -0.73
SNIP1-201ENST00000296215 IGHV2OR16-5A0A0B4J2B6 119 aa10.46□□□□□ -0.73
SNIP1-201ENST00000296215 A0A1W2PQH9 124 aa10.46□□□□□ -0.73
SNIP1-201ENST00000296215 FAM24AA6NFZ4 105 aa10.46□□□□□ -0.73
SNIP1-201ENST00000296215 OR5B21A6NL26 309 aa10.46□□□□□ -0.73
SNIP1-201ENST00000296215 HSPB2A8KAH6 182 aa10.46□□□□□ -0.73
SNIP1-201ENST00000296215 BCL6P41182 706 aa10.46□□□□□ -0.73
SNIP1-201ENST00000296215 TCTAP57738 103 aa10.46□□□□□ -0.73
SNIP1-201ENST00000296215 PMP22Q01453 160 aa10.46□□□□□ -0.73
SNIP1-201ENST00000296215 IHHQ14623 411 aa10.46□□□□□ -0.73
SNIP1-201ENST00000296215 HSPB2Q16082 182 aa10.46□□□□□ -0.73
SNIP1-201ENST00000296215 HLA-DQA1Q5Y7H0 255 aa10.46□□□□□ -0.73
SNIP1-201ENST00000296215 KCNG3Q8TAE7 436 aa10.46□□□□□ -0.73
SNIP1-201ENST00000296215 SPG21Q9NZD8 308 aa10.46□□□□□ -0.73
SNIP1-201ENST00000296215 TBC1D29Q9UFV1 150 aa10.46□□□□□ -0.73
SNIP1-201ENST00000296215 LOC105371242A0A075B767 164 aa10.46□□□□□ -0.73
SNIP1-201ENST00000296215 PPIAL4CA0A0B4J2A2 164 aa10.46□□□□□ -0.73
SNIP1-201ENST00000296215 SLC17A2O00624 439 aa10.46□□□□□ -0.73
SNIP1-201ENST00000296215 GYPAP02724 150 aa10.46□□□□□ -0.73
SNIP1-201ENST00000296215 PPIAL4GP0DN37 164 aa10.46□□□□□ -0.73
SNIP1-201ENST00000296215 CTSEP14091 401 aa10.46□□□□□ -0.73
SNIP1-201ENST00000296215 ADRA1AP35348 466 aa10.46□□□□□ -0.73
SNIP1-201ENST00000296215 MAS1LP35410 378 aa10.46□□□□□ -0.73
SNIP1-201ENST00000296215 OR1D4P47884 311 aa10.46□□□□□ -0.73
SNIP1-201ENST00000296215 ARIH2OSQ8N7S6 290 aa10.46□□□□□ -0.73
SNIP1-201ENST00000296215 STPG4Q8N801 248 aa10.46□□□□□ -0.73
SNIP1-201ENST00000296215 WFDC12Q8WWY7 111 aa10.46□□□□□ -0.73
SNIP1-201ENST00000296215 TSPAN32Q96QS1 320 aa10.46□□□□□ -0.73
SNIP1-201ENST00000296215 VN1R1Q9GZP7 353 aa10.46□□□□□ -0.73
SNIP1-201ENST00000296215 OR7C1O76099 320 aaPredicted RBP10.46□□□□□ -0.74
SNIP1-201ENST00000296215 HMGN2P05204 90 aaKnown RBP10.46□□□□□ -0.74
SNIP1-201ENST00000296215 ATP6V0CP27449 155 aa10.46□□□□□ -0.74
SNIP1-201ENST00000296215 OPRM1P35372 400 aa10.46□□□□□ -0.74
SNIP1-201ENST00000296215 IL13RA2Q14627 380 aa10.46□□□□□ -0.74
SNIP1-201ENST00000296215 MED25Q71SY5 747 aa10.46□□□□□ -0.74
SNIP1-201ENST00000296215 Q7L0L9 218 aa10.46□□□□□ -0.74
SNIP1-201ENST00000296215 DTWD2Q8NBA8 298 aa10.46□□□□□ -0.74
SNIP1-201ENST00000296215 CXorf40AQ8TE69 158 aa10.46□□□□□ -0.74
SNIP1-201ENST00000296215 MRGPRX3Q96LB0 322 aa10.46□□□□□ -0.74
SNIP1-201ENST00000296215 TNFRSF13CQ96RJ3 184 aa10.46□□□□□ -0.74
SNIP1-201ENST00000296215 MAP1LC3CQ9BXW4 147 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms