RNA–Protein interactions for RNA: ENST00000296098.4

TRIM54-201, Transcript of tripartite motif containing 54, humanhuman

TSL 1 (best) BASIC

Gene TRIM54, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-201ENST00000296098 MRPS24Q96EL2 167 aaKnown RBP20.74■□□□□ 0.91
TRIM54-201ENST00000296098 ANXA10Q9UJ72 324 aa20.74■□□□□ 0.91
TRIM54-201ENST00000296098 C14orf166Q9Y224 244 aaKnown RBP20.74■□□□□ 0.91
TRIM54-201ENST00000296098 SHOXO15266 292 aa20.73■□□□□ 0.91
TRIM54-201ENST00000296098 CD46P15529 392 aa20.73■□□□□ 0.91
TRIM54-201ENST00000296098 GLRA1P23415 457 aa20.73■□□□□ 0.91
TRIM54-201ENST00000296098 DTYMKP23919 212 aa20.73■□□□□ 0.91
TRIM54-201ENST00000296098 PSMB6P28072 239 aa20.73■□□□□ 0.91
TRIM54-201ENST00000296098 FOXG1P55316 489 aaPredicted RBP20.73■□□□□ 0.91
TRIM54-201ENST00000296098 ATP1A1-AS1Q5TC04 95 aa20.73■□□□□ 0.91
TRIM54-201ENST00000296098 MCEMP1Q8IX19 187 aa20.73■□□□□ 0.91
TRIM54-201ENST00000296098 OR5M9Q8NGP3 310 aa20.73■□□□□ 0.91
TRIM54-201ENST00000296098 WBP1Q96G27 269 aa20.73■□□□□ 0.91
TRIM54-201ENST00000296098 CMSS1Q9BQ75 279 aaKnown RBP20.73■□□□□ 0.91
TRIM54-201ENST00000296098 GEMIN2O14893 280 aaKnown RBP20.73■□□□□ 0.91
TRIM54-201ENST00000296098 ACTL6AO96019 429 aa20.73■□□□□ 0.91
TRIM54-201ENST00000296098 COX5BP10606 129 aa20.73■□□□□ 0.91
TRIM54-201ENST00000296098 SPEM2Q0P670 501 aa20.73■□□□□ 0.91
TRIM54-201ENST00000296098 TRIP6Q15654 476 aaKnown RBP20.73■□□□□ 0.91
TRIM54-201ENST00000296098 ANKRD55Q3KP44 614 aa20.73■□□□□ 0.91
TRIM54-201ENST00000296098 FBXL14Q8N1E6 418 aa20.73■□□□□ 0.91
TRIM54-201ENST00000296098 SULT4A1Q9BR01 284 aa20.73■□□□□ 0.91
TRIM54-201ENST00000296098 RPS2P15880 293 aaKnown RBP20.72■□□□□ 0.91
TRIM54-201ENST00000296098 CCNOP22674 350 aa20.72■□□□□ 0.91
TRIM54-201ENST00000296098 ZFP62Q8NB50 900 aaPredicted RBP20.72■□□□□ 0.91
TRIM54-201ENST00000296098 INO80EQ8NBZ0 244 aaPredicted RBP20.72■□□□□ 0.91
TRIM54-201ENST00000296098 OR10AD1Q8NGE0 317 aa20.72■□□□□ 0.91
TRIM54-201ENST00000296098 OR51F2Q8NH61 342 aa20.72■□□□□ 0.91
TRIM54-201ENST00000296098 ZNF2Q9BSG1 426 aaPredicted RBP20.72■□□□□ 0.91
TRIM54-201ENST00000296098 PCDHB16Q9NRJ7 776 aa20.72■□□□□ 0.91
TRIM54-201ENST00000296098 SDHAF2Q9NX18 166 aa20.72■□□□□ 0.91
TRIM54-201ENST00000296098 PRR13Q9NZ81 148 aa20.72■□□□□ 0.91
TRIM54-201ENST00000296098 LIPGQ9Y5X9 500 aa20.72■□□□□ 0.91
TRIM54-201ENST00000296098 MED13Q9UHV7 2174 aa20.72■□□□□ 0.91
TRIM54-201ENST00000296098 C5orf49A4QMS7 147 aa20.71■□□□□ 0.91
TRIM54-201ENST00000296098 ZNF850A8MQ14 1090 aa20.71■□□□□ 0.91
TRIM54-201ENST00000296098 SFTPBP07988 381 aa20.71■□□□□ 0.91
TRIM54-201ENST00000296098 FCGR3AP08637 254 aa20.71■□□□□ 0.91
TRIM54-201ENST00000296098 SLC10A1Q14973 349 aa20.71■□□□□ 0.91
TRIM54-201ENST00000296098 OR56B2PQ8NGI1 322 aa20.71■□□□□ 0.91
TRIM54-201ENST00000296098 WDR13Q9H1Z4 485 aa20.71■□□□□ 0.91
TRIM54-201ENST00000296098 ACKR4Q9NPB9 350 aa20.71■□□□□ 0.91
TRIM54-201ENST00000296098 GPR160Q9UJ42 338 aa20.71■□□□□ 0.91
TRIM54-201ENST00000296098 CSAG2Q9Y5P2 127 aa20.71■□□□□ 0.91
TRIM54-201ENST00000296098 ZNF503-AS2A6NEH8 195 aa20.71■□□□□ 0.91
TRIM54-201ENST00000296098 ARGFXA6NJG6 315 aa20.71■□□□□ 0.91
TRIM54-201ENST00000296098 CDK2AP1O14519 115 aa20.71■□□□□ 0.91
TRIM54-201ENST00000296098 ADAP1O75689 374 aa20.71■□□□□ 0.91
TRIM54-201ENST00000296098 ZNF250P15622 560 aa20.71■□□□□ 0.91
TRIM54-201ENST00000296098 BEX5Q5H9J7 111 aa20.71■□□□□ 0.91
TRIM54-201ENST00000296098 PNPLA5Q7Z6Z6 429 aaPredicted RBP20.71■□□□□ 0.91
TRIM54-201ENST00000296098 LRRC20Q8TCA0 184 aa20.71■□□□□ 0.91
TRIM54-201ENST00000296098 PAPOLGQ9BWT3 736 aaKnown RBP20.71■□□□□ 0.91
TRIM54-201ENST00000296098 REG4Q9BYZ8 158 aa20.71■□□□□ 0.91
TRIM54-201ENST00000296098 PFDN2Q9UHV9 154 aa20.71■□□□□ 0.91
TRIM54-201ENST00000296098 ST3GAL6Q9Y274 331 aa20.71■□□□□ 0.91
TRIM54-201ENST00000296098 MFSD2BA6NFX1 497 aa20.7■□□□□ 0.9
TRIM54-201ENST00000296098 CD79AP11912 226 aa20.7■□□□□ 0.9
TRIM54-201ENST00000296098 LUMP51884 338 aaPredicted RBP20.7■□□□□ 0.9
TRIM54-201ENST00000296098 PDZD9Q8IXQ8 264 aa20.7■□□□□ 0.9
TRIM54-201ENST00000296098 ZNF611Q8N823 705 aa20.7■□□□□ 0.9
TRIM54-201ENST00000296098 REPIN1Q9BWE0 567 aaKnown RBP20.7■□□□□ 0.9
TRIM54-201ENST00000296098 CRYZL1O95825 349 aa20.7■□□□□ 0.9
TRIM54-201ENST00000296098 KNG1P01042 644 aa20.7■□□□□ 0.9
TRIM54-201ENST00000296098 CCL2P13500 99 aa20.7■□□□□ 0.9
TRIM54-201ENST00000296098 ARR3P36575 388 aa20.7■□□□□ 0.9
TRIM54-201ENST00000296098 RBM11P57052 281 aaKnown RBP20.7■□□□□ 0.9
TRIM54-201ENST00000296098 NUFIP2Q7Z417 695 aaKnown RBP20.7■□□□□ 0.9
TRIM54-201ENST00000296098 CALHM1Q8IU99 346 aa20.7■□□□□ 0.9
TRIM54-201ENST00000296098 APOBEC3DQ96AK3 386 aaPredicted RBP20.7■□□□□ 0.9
TRIM54-201ENST00000296098 ZNF471Q9BX82 626 aaPredicted RBP20.7■□□□□ 0.9
TRIM54-201ENST00000296098 NECAP2Q9NVZ3 263 aa20.7■□□□□ 0.9
TRIM54-201ENST00000296098 FREM1Q5H8C1 2179 aa20.69■□□□□ 0.9
TRIM54-201ENST00000296098 OR5H8P0DN80 308 aa20.69■□□□□ 0.9
TRIM54-201ENST00000296098 OPRM1P35372 400 aa20.69■□□□□ 0.9
TRIM54-201ENST00000296098 PTGER4P35408 488 aa20.69■□□□□ 0.9
TRIM54-201ENST00000296098 RRADP55042 308 aa20.69■□□□□ 0.9
TRIM54-201ENST00000296098 MALLQ13021 153 aa20.69■□□□□ 0.9
TRIM54-201ENST00000296098 MRPL21Q7Z2W9 205 aaKnown RBP20.69■□□□□ 0.9
TRIM54-201ENST00000296098 OR1S1Q8NH92 325 aa20.69■□□□□ 0.9
TRIM54-201ENST00000296098 DCUN1D4Q92564 292 aa20.69■□□□□ 0.9
TRIM54-201ENST00000296098 DYRK2Q92630 601 aa20.69■□□□□ 0.9
TRIM54-201ENST00000296098 TRBV6-7A0A0A0MS04 114 aa20.68■□□□□ 0.9
TRIM54-201ENST00000296098 PDCD6O75340 191 aa20.68■□□□□ 0.9
TRIM54-201ENST00000296098 CTSDP07339 412 aaPredicted RBP20.68■□□□□ 0.9
TRIM54-201ENST00000296098 ARG2P78540 354 aa20.68■□□□□ 0.9
TRIM54-201ENST00000296098 TGIF1Q15583 401 aa20.68■□□□□ 0.9
TRIM54-201ENST00000296098 SLC25A32Q9H2D1 315 aa20.68■□□□□ 0.9
TRIM54-201ENST00000296098 LDAHQ9H6V9 325 aa20.68■□□□□ 0.9
TRIM54-201ENST00000296098 METTL8Q9H825 291 aaKnown RBP20.68■□□□□ 0.9
TRIM54-201ENST00000296098 SESN1Q9Y6P5 492 aa20.68■□□□□ 0.9
TRIM54-201ENST00000296098 IFNA2P01563 188 aa20.68■□□□□ 0.9
TRIM54-201ENST00000296098 PRDX4Q13162 271 aa20.68■□□□□ 0.9
TRIM54-201ENST00000296098 PLEKHN1Q494U1 663 aaPredicted RBP20.68■□□□□ 0.9
TRIM54-201ENST00000296098 SLC25A26Q70HW3 274 aa20.68■□□□□ 0.9
TRIM54-201ENST00000296098 MICU1Q9BPX6 476 aa20.68■□□□□ 0.9
TRIM54-201ENST00000296098 DEFB127Q9H1M4 99 aa20.68■□□□□ 0.9
TRIM54-201ENST00000296098 PQLC2LA1A4F0 135 aa20.67■□□□□ 0.9
TRIM54-201ENST00000296098 ZNHIT1O43257 154 aa20.67■□□□□ 0.9
TRIM54-201ENST00000296098 RAB1AP62820 205 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms