RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 OR52N1Q8NH53 320 aa11.13□□□□□ -0.63
SLX4-201ENST00000294008 NEIL1Q96FI4 390 aaPredicted RBP11.13□□□□□ -0.63
SLX4-201ENST00000294008 SDHAP31040 664 aa11.13□□□□□ -0.63
SLX4-201ENST00000294008 MRGPREQ86SM8 312 aa11.13□□□□□ -0.63
SLX4-201ENST00000294008 KLHDC8BQ8IXV7 354 aa11.13□□□□□ -0.63
SLX4-201ENST00000294008 TMEM102Q8N9M5 508 aaPredicted RBP11.13□□□□□ -0.63
SLX4-201ENST00000294008 MORN4Q8NDC4 146 aa11.13□□□□□ -0.63
SLX4-201ENST00000294008 SNRNP40Q96DI7 357 aaKnown RBP11.13□□□□□ -0.63
SLX4-201ENST00000294008 STARD4Q96DR4 205 aa11.13□□□□□ -0.63
SLX4-201ENST00000294008 POM121Q96HA1 1249 aa11.13□□□□□ -0.63
SLX4-201ENST00000294008 RAX2Q96IS3 184 aa11.13□□□□□ -0.63
SLX4-201ENST00000294008 THAP10Q9P2Z0 257 aaPredicted RBP11.13□□□□□ -0.63
SLX4-201ENST00000294008 PRSS50Q9UI38 385 aa11.13□□□□□ -0.63
SLX4-201ENST00000294008 SRFP11831 508 aa11.13□□□□□ -0.63
SLX4-201ENST00000294008 SLC38A11Q08AI6 406 aa11.13□□□□□ -0.63
SLX4-201ENST00000294008 HLXQ14774 488 aaPredicted RBP11.13□□□□□ -0.63
SLX4-201ENST00000294008 FAM78BQ5VT40 261 aa11.13□□□□□ -0.63
SLX4-201ENST00000294008 OR10J6PQ8NGY7 276 aa11.13□□□□□ -0.63
SLX4-201ENST00000294008 ORAI1Q96D31 301 aa11.13□□□□□ -0.63
SLX4-201ENST00000294008 NIPSNAP1Q9BPW8 284 aa11.13□□□□□ -0.63
SLX4-201ENST00000294008 FLVCR2Q9UPI3 526 aa11.13□□□□□ -0.63
SLX4-201ENST00000294008 CDX1P47902 265 aaPredicted RBP11.13□□□□□ -0.63
SLX4-201ENST00000294008 SRSF5Q13243 272 aaKnown RBP11.13□□□□□ -0.63
SLX4-201ENST00000294008 NSUN5P2Q63ZY6 315 aa11.13□□□□□ -0.63
SLX4-201ENST00000294008 C16orf82Q7Z2V1 217 aa11.13□□□□□ -0.63
SLX4-201ENST00000294008 GUCD1Q96NT3 240 aa11.13□□□□□ -0.63
SLX4-201ENST00000294008 UNCXA6NJT0 531 aa11.12□□□□□ -0.63
SLX4-201ENST00000294008 HKR1P10072 659 aa11.12□□□□□ -0.63
SLX4-201ENST00000294008 TMEM99Q8N816 258 aa11.12□□□□□ -0.63
SLX4-201ENST00000294008 LMTK2Q8IWU2 1503 aa11.12□□□□□ -0.63
SLX4-201ENST00000294008 DUSP18Q8NEJ0 188 aa11.12□□□□□ -0.63
SLX4-201ENST00000294008 CHAC2Q8WUX2 184 aa11.12□□□□□ -0.63
SLX4-201ENST00000294008 LMO7Q8WWI1 1683 aa11.12□□□□□ -0.63
SLX4-201ENST00000294008 SYT14P1Q58G82 188 aa11.12□□□□□ -0.63
SLX4-201ENST00000294008 MS4A10Q96PG2 267 aa11.12□□□□□ -0.63
SLX4-201ENST00000294008 TRAV8-7A0A075B6U6 113 aa11.12□□□□□ -0.63
SLX4-201ENST00000294008 FFAR1O14842 300 aa11.12□□□□□ -0.63
SLX4-201ENST00000294008 GNG3P63215 75 aa11.12□□□□□ -0.63
SLX4-201ENST00000294008 MMDQ15546 238 aa11.12□□□□□ -0.63
SLX4-201ENST00000294008 HIST3H3Q16695 136 aa11.12□□□□□ -0.63
SLX4-201ENST00000294008 CHCHD4Q8N4Q1 142 aa11.12□□□□□ -0.63
SLX4-201ENST00000294008 OR1F12Q8NHA8 337 aa11.12□□□□□ -0.63
SLX4-201ENST00000294008 CD37P11049 281 aa11.12□□□□□ -0.63
SLX4-201ENST00000294008 CSNK1DP48730 415 aa11.12□□□□□ -0.63
SLX4-201ENST00000294008 FZD2Q14332 565 aa11.12□□□□□ -0.63
SLX4-201ENST00000294008 ABHD17CQ6PCB6 329 aa11.12□□□□□ -0.63
SLX4-201ENST00000294008 B3GNT9Q6UX72 402 aa11.12□□□□□ -0.63
SLX4-201ENST00000294008 OR4D9Q8NGE8 314 aa11.12□□□□□ -0.63
SLX4-201ENST00000294008 IGKV6D-41A0A0C4DH26 115 aa11.12□□□□□ -0.63
SLX4-201ENST00000294008 TAAR5O14804 337 aa11.12□□□□□ -0.63
SLX4-201ENST00000294008 PTGFRP43088 359 aa11.12□□□□□ -0.63
SLX4-201ENST00000294008 NOXO1Q8NFA2 376 aa11.12□□□□□ -0.63
SLX4-201ENST00000294008 OR52B4Q8NGK2 314 aa11.12□□□□□ -0.63
SLX4-201ENST00000294008 UBQLN3Q9H347 655 aa11.12□□□□□ -0.63
SLX4-201ENST00000294008 C10orf71Q711Q0 1435 aa11.12□□□□□ -0.63
SLX4-201ENST00000294008 CD22P20273 847 aa11.11□□□□□ -0.63
SLX4-201ENST00000294008 SOSTQ9BQB4 213 aa11.11□□□□□ -0.63
SLX4-201ENST00000294008 AFDNP55196 1824 aaKnown RBP11.11□□□□□ -0.63
SLX4-201ENST00000294008 PATE4P0C8F1 98 aa11.11□□□□□ -0.63
SLX4-201ENST00000294008 ATF1P18846 271 aa11.11□□□□□ -0.63
SLX4-201ENST00000294008 SLC37A1P57057 533 aa11.11□□□□□ -0.63
SLX4-201ENST00000294008 TMEM183BQ1AE95 376 aa11.11□□□□□ -0.63
SLX4-201ENST00000294008 TMEM128Q5BJH2 165 aa11.11□□□□□ -0.63
SLX4-201ENST00000294008 DIRC2Q96SL1 478 aa11.11□□□□□ -0.63
SLX4-201ENST00000294008 KLK15Q9H2R5 256 aa11.11□□□□□ -0.63
SLX4-201ENST00000294008 KCNK15Q9H427 330 aa11.11□□□□□ -0.63
SLX4-201ENST00000294008 ZDHHC8Q9ULC8 765 aa11.11□□□□□ -0.63
SLX4-201ENST00000294008 RGS13O14921 159 aa11.11□□□□□ -0.63
SLX4-201ENST00000294008 ZNF737O75373 536 aa11.11□□□□□ -0.63
SLX4-201ENST00000294008 COX6CP09669 75 aa11.11□□□□□ -0.63
SLX4-201ENST00000294008 SUMO2P61956 95 aaKnown RBP11.11□□□□□ -0.63
SLX4-201ENST00000294008 ZNF343Q6P1L6 599 aa11.11□□□□□ -0.63
SLX4-201ENST00000294008 C15orf39Q6ZRI6 1047 aa11.11□□□□□ -0.63
SLX4-201ENST00000294008 APOBEC4Q8WW27 367 aaKnown RBP11.11□□□□□ -0.63
SLX4-201ENST00000294008 SLC35B4Q969S0 331 aa11.11□□□□□ -0.63
SLX4-201ENST00000294008 GPR61Q9BZJ8 451 aa11.11□□□□□ -0.63
SLX4-201ENST00000294008 A0A1B0GU03 582 aa11.11□□□□□ -0.63
SLX4-201ENST00000294008 SPAARA0A1B0GVQ0 90 aa11.11□□□□□ -0.63
SLX4-201ENST00000294008 FGF17O60258 216 aa11.11□□□□□ -0.63
SLX4-201ENST00000294008 SPPL3Q8TCT6 385 aa11.11□□□□□ -0.63
SLX4-201ENST00000294008 ZNF629Q9UEG4 869 aaPredicted RBP11.11□□□□□ -0.63
SLX4-201ENST00000294008 MYH7P12883 1935 aa11.11□□□□□ -0.63
SLX4-201ENST00000294008 PRSS37A4D1T9 235 aa11.11□□□□□ -0.63
SLX4-201ENST00000294008 C21orf62-AS1Q17RA5 79 aa11.11□□□□□ -0.63
SLX4-201ENST00000294008 MRPL54Q6P161 138 aaKnown RBP11.11□□□□□ -0.63
SLX4-201ENST00000294008 LYSMD2Q8IV50 215 aa11.11□□□□□ -0.63
SLX4-201ENST00000294008 SSMEM1Q8WWF3 244 aa11.11□□□□□ -0.63
SLX4-201ENST00000294008 GPR137Q96N19 417 aa11.11□□□□□ -0.63
SLX4-201ENST00000294008 HEXA-AS1Q9H8Q6 139 aa11.11□□□□□ -0.63
SLX4-201ENST00000294008 R4GMQ9 66 aa11.11□□□□□ -0.63
SLX4-201ENST00000294008 SCG5P05408 212 aa11.11□□□□□ -0.63
SLX4-201ENST00000294008 PSMB6P28072 239 aa11.11□□□□□ -0.63
SLX4-201ENST00000294008 NUBP1P53384 320 aa11.11□□□□□ -0.63
SLX4-201ENST00000294008 TFF2Q03403 129 aa11.11□□□□□ -0.63
SLX4-201ENST00000294008 PSG5Q15238 335 aa11.11□□□□□ -0.63
SLX4-201ENST00000294008 A0A1W2PPE3 182 aa11.1□□□□□ -0.63
SLX4-201ENST00000294008 CORTO00230 105 aa11.1□□□□□ -0.63
SLX4-201ENST00000294008 DNAL4O96015 105 aa11.1□□□□□ -0.63
SLX4-201ENST00000294008 GPR6P46095 362 aaPredicted RBP11.1□□□□□ -0.63
SLX4-201ENST00000294008 IGFBP7Q16270 282 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms