RNA–Protein interactions for RNA: ENST00000293406.7

LSM12-201, Transcript of LSM12 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM12, Length 2,308 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-201ENST00000293406 COMMD1Q8N668 190 aa16.73■□□□□ 0.27
LSM12-201ENST00000293406 CCDC54Q8NEL0 328 aa16.73■□□□□ 0.27
LSM12-201ENST00000293406 SPTSSAQ969W0 71 aa16.73■□□□□ 0.27
LSM12-201ENST00000293406 BSCL2Q96G97 398 aaPredicted RBP16.73■□□□□ 0.27
LSM12-201ENST00000293406 ZNF385AQ96PM9 386 aaKnown RBP16.73■□□□□ 0.27
LSM12-201ENST00000293406 SPSB2Q99619 263 aa16.73■□□□□ 0.27
LSM12-201ENST00000293406 NAA60Q9H7X0 242 aa16.73■□□□□ 0.27
LSM12-201ENST00000293406 MTCH2Q9Y6C9 303 aa16.73■□□□□ 0.27
LSM12-201ENST00000293406 IGHV3-15A0A0B4J1V0 119 aa16.73■□□□□ 0.27
LSM12-201ENST00000293406 SNRNP70P08621 437 aaKnown RBP16.73■□□□□ 0.27
LSM12-201ENST00000293406 ACAA1P09110 424 aaPredicted RBP16.73■□□□□ 0.27
LSM12-201ENST00000293406 TMEM187Q14656 261 aa16.73■□□□□ 0.27
LSM12-201ENST00000293406 AWAT1Q58HT5 328 aa16.73■□□□□ 0.27
LSM12-201ENST00000293406 FOXL2NBQ6ZUU3 175 aa16.73■□□□□ 0.27
LSM12-201ENST00000293406 RTN4IP1Q8WWV3 396 aaPredicted RBP16.73■□□□□ 0.27
LSM12-201ENST00000293406 LUZP4Q9P127 313 aa16.73■□□□□ 0.27
LSM12-201ENST00000293406 NPIPA2E9PIF3 369 aa16.72■□□□□ 0.27
LSM12-201ENST00000293406 NPIPA3F8WFD2 350 aa16.72■□□□□ 0.27
LSM12-201ENST00000293406 DHHO43323 396 aa16.72■□□□□ 0.27
LSM12-201ENST00000293406 DKK1O94907 266 aa16.72■□□□□ 0.27
LSM12-201ENST00000293406 DIRAS3O95661 229 aa16.72■□□□□ 0.27
LSM12-201ENST00000293406 MT-ND4LP03901 98 aa16.72■□□□□ 0.27
LSM12-201ENST00000293406 S100A6P06703 90 aa16.72■□□□□ 0.27
LSM12-201ENST00000293406 CAMLGP49069 296 aa16.72■□□□□ 0.27
LSM12-201ENST00000293406 RNF212Q495C1 297 aa16.72■□□□□ 0.27
LSM12-201ENST00000293406 LILRB1Q8NHL6 650 aaPredicted RBP16.72■□□□□ 0.27
LSM12-201ENST00000293406 SGK3Q96BR1 496 aa16.72■□□□□ 0.27
LSM12-201ENST00000293406 EIF5A2Q9GZV4 153 aaKnown RBP16.72■□□□□ 0.27
LSM12-201ENST00000293406 C19orf25Q9UFG5 118 aaPredicted RBP16.72■□□□□ 0.27
LSM12-201ENST00000293406 RARRES3Q9UL19 164 aa16.72■□□□□ 0.27
LSM12-201ENST00000293406 CHCHD2Q9Y6H1 151 aaPredicted RBP16.72■□□□□ 0.27
LSM12-201ENST00000293406 MYO7BQ6PIF6 2116 aa16.72■□□□□ 0.27
LSM12-201ENST00000293406 TP53I11O14683 189 aa16.71■□□□□ 0.27
LSM12-201ENST00000293406 SPRY1O43609 319 aaPredicted RBP16.71■□□□□ 0.27
LSM12-201ENST00000293406 ZNF205O95201 554 aa16.71■□□□□ 0.27
LSM12-201ENST00000293406 ZNF44P15621 663 aa16.71■□□□□ 0.27
LSM12-201ENST00000293406 FXYD4P59646 89 aa16.71■□□□□ 0.27
LSM12-201ENST00000293406 SHBQ15464 509 aa16.71■□□□□ 0.27
LSM12-201ENST00000293406 LYZL2Q7Z4W2 148 aa16.71■□□□□ 0.27
LSM12-201ENST00000293406 SPSB1Q96BD6 273 aa16.71■□□□□ 0.27
LSM12-201ENST00000293406 GALNT14Q96FL9 552 aa16.71■□□□□ 0.27
LSM12-201ENST00000293406 NAA11Q9BSU3 229 aaPredicted RBP16.71■□□□□ 0.27
LSM12-201ENST00000293406 NXT1Q9UKK6 140 aaKnown RBP16.71■□□□□ 0.27
LSM12-201ENST00000293406 HSF4Q9ULV5 492 aa16.71■□□□□ 0.27
LSM12-201ENST00000293406 PRUNE2Q8WUY3 3088 aa16.71■□□□□ 0.27
LSM12-201ENST00000293406 FAM230AA0A1W2PPH8 454 aa16.71■□□□□ 0.27
LSM12-201ENST00000293406 C7orf77A4D0Y5 90 aa16.71■□□□□ 0.27
LSM12-201ENST00000293406 M0R036 132 aa16.71■□□□□ 0.27
LSM12-201ENST00000293406 GPR137BO60478 399 aa16.71■□□□□ 0.27
LSM12-201ENST00000293406 DTYMKP23919 212 aa16.71■□□□□ 0.27
LSM12-201ENST00000293406 P2RY1P47900 373 aa16.71■□□□□ 0.27
LSM12-201ENST00000293406 AFF3P51826 1226 aaKnown RBP16.71■□□□□ 0.27
LSM12-201ENST00000293406 EIF2S3LQ2VIR3 472 aaKnown RBP16.71■□□□□ 0.27
LSM12-201ENST00000293406 GINS3Q9BRX5 216 aa16.71■□□□□ 0.27
LSM12-201ENST00000293406 SPACA1Q9HBV2 294 aa16.71■□□□□ 0.27
LSM12-201ENST00000293406 WFDC1Q9HC57 220 aa16.71■□□□□ 0.27
LSM12-201ENST00000293406 ZNF581Q9P0T4 197 aa16.71■□□□□ 0.27
LSM12-201ENST00000293406 C5orf52A6NGY3 159 aa16.7■□□□□ 0.26
LSM12-201ENST00000293406 BCAT2O15382 392 aaPredicted RBP16.7■□□□□ 0.26
LSM12-201ENST00000293406 XRCC2O43543 280 aa16.7■□□□□ 0.26
LSM12-201ENST00000293406 CD63P08962 238 aa16.7■□□□□ 0.26
LSM12-201ENST00000293406 ACKR3P25106 362 aa16.7■□□□□ 0.26
LSM12-201ENST00000293406 UCP2P55851 309 aa16.7■□□□□ 0.26
LSM12-201ENST00000293406 TSPO2Q5TGU0 170 aa16.7■□□□□ 0.26
LSM12-201ENST00000293406 GPR157Q5UAW9 335 aa16.7■□□□□ 0.26
LSM12-201ENST00000293406 ZNF561Q8N587 486 aa16.7■□□□□ 0.26
LSM12-201ENST00000293406 TMEM156Q8N614 296 aa16.7■□□□□ 0.26
LSM12-201ENST00000293406 KDF1Q8NAX2 398 aaPredicted RBP16.7■□□□□ 0.26
LSM12-201ENST00000293406 OR2AE1Q8NHA4 323 aa16.7■□□□□ 0.26
LSM12-201ENST00000293406 SUCNR1Q9BXA5 334 aa16.7■□□□□ 0.26
LSM12-201ENST00000293406 MASP2O00187 686 aa16.7■□□□□ 0.26
LSM12-201ENST00000293406 PRH1P02810 166 aa16.7■□□□□ 0.26
LSM12-201ENST00000293406 FHITP49789 147 aa16.7■□□□□ 0.26
LSM12-201ENST00000293406 PHLDA2Q53GA4 152 aa16.7■□□□□ 0.26
LSM12-201ENST00000293406 TMEM123Q8N131 208 aa16.7■□□□□ 0.26
LSM12-201ENST00000293406 FBXO17Q96EF6 278 aa16.7■□□□□ 0.26
LSM12-201ENST00000293406 IP6K3Q96PC2 410 aa16.7■□□□□ 0.26
LSM12-201ENST00000293406 UCN2Q96RP3 112 aa16.7■□□□□ 0.26
LSM12-201ENST00000293406 SCRT1Q9BWW7 348 aa16.7■□□□□ 0.26
LSM12-201ENST00000293406 ULBP2Q9BZM5 246 aa16.7■□□□□ 0.26
LSM12-201ENST00000293406 C19orf12Q9NSK7 152 aa16.7■□□□□ 0.26
LSM12-201ENST00000293406 A0A087WZY1 265 aa16.69■□□□□ 0.26
LSM12-201ENST00000293406 H7C1Q1 480 aa16.69■□□□□ 0.26
LSM12-201ENST00000293406 EIF1BO60739 113 aaKnown RBP16.69■□□□□ 0.26
LSM12-201ENST00000293406 SUCLG1P53597 346 aaKnown RBP16.69■□□□□ 0.26
LSM12-201ENST00000293406 ZNF385CQ66K41 422 aaPredicted RBP16.69■□□□□ 0.26
LSM12-201ENST00000293406 LIAT1Q6ZQX7 453 aa16.69■□□□□ 0.26
LSM12-201ENST00000293406 C20orf24Q9BUV8 137 aa16.69■□□□□ 0.26
LSM12-201ENST00000293406 TUBA4BQ9H853 241 aa16.69■□□□□ 0.26
LSM12-201ENST00000293406 RTTNQ86VV8 2226 aa16.69■□□□□ 0.26
LSM12-201ENST00000293406 UBE2CO00762 179 aa16.69■□□□□ 0.26
LSM12-201ENST00000293406 VAMP5O95183 116 aa16.69■□□□□ 0.26
LSM12-201ENST00000293406 S100A8P05109 93 aa16.69■□□□□ 0.26
LSM12-201ENST00000293406 GLI4P10075 376 aa16.69■□□□□ 0.26
LSM12-201ENST00000293406 CBR1P16152 277 aa16.69■□□□□ 0.26
LSM12-201ENST00000293406 DUSP1P28562 367 aa16.69■□□□□ 0.26
LSM12-201ENST00000293406 KRBOX4Q5JUW0 171 aa16.69■□□□□ 0.26
LSM12-201ENST00000293406 RAET1LQ5VY80 246 aa16.69■□□□□ 0.26
LSM12-201ENST00000293406 C20orf196Q8IYI0 205 aa16.69■□□□□ 0.26
LSM12-201ENST00000293406 LRTM2Q8N967 370 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms