RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 RPP14O95059 124 aaKnown RBP20.52■□□□□ 0.88
U2AF1-201ENST00000291552 NXPH2O95156 264 aa20.52■□□□□ 0.88
U2AF1-201ENST00000291552 APOL3O95236 402 aa20.52■□□□□ 0.88
U2AF1-201ENST00000291552 CCL3L1P16619 93 aa20.52■□□□□ 0.88
U2AF1-201ENST00000291552 CATSPERDQ86XM0 798 aa20.52■□□□□ 0.88
U2AF1-201ENST00000291552 ANGPTL5Q86XS5 388 aa20.52■□□□□ 0.88
U2AF1-201ENST00000291552 OR4M1Q8NGD0 313 aa20.52■□□□□ 0.88
U2AF1-201ENST00000291552 PPP1R35Q8TAP8 253 aa20.52■□□□□ 0.88
U2AF1-201ENST00000291552 POLDIP2Q9Y2S7 368 aa20.52■□□□□ 0.88
U2AF1-201ENST00000291552 H3BSH0 61 aa20.51■□□□□ 0.87
U2AF1-201ENST00000291552 SLC1A7O00341 560 aa20.51■□□□□ 0.87
U2AF1-201ENST00000291552 FASP25445 335 aa20.51■□□□□ 0.87
U2AF1-201ENST00000291552 BMXP51813 675 aa20.51■□□□□ 0.87
U2AF1-201ENST00000291552 ACTR3P61158 418 aa20.51■□□□□ 0.87
U2AF1-201ENST00000291552 ODF4Q2M2E3 257 aa20.51■□□□□ 0.87
U2AF1-201ENST00000291552 SLC35E4Q6ICL7 350 aa20.51■□□□□ 0.87
U2AF1-201ENST00000291552 CRIP3Q6Q6R5 217 aa20.51■□□□□ 0.87
U2AF1-201ENST00000291552 ZDHHC13Q8IUH4 622 aa20.51■□□□□ 0.87
U2AF1-201ENST00000291552 TRMT10AQ8TBZ6 339 aaKnown RBP20.51■□□□□ 0.87
U2AF1-201ENST00000291552 SSX3Q99909 188 aa20.51■□□□□ 0.87
U2AF1-201ENST00000291552 OR14J1Q9UGF5 321 aa20.51■□□□□ 0.87
U2AF1-201ENST00000291552 WARS2Q9UGM6 360 aaKnown RBP20.51■□□□□ 0.87
U2AF1-201ENST00000291552 AP4S1Q9Y587 144 aa20.51■□□□□ 0.87
U2AF1-201ENST00000291552 IGKV1-27A0A075B6S5 117 aa20.5■□□□□ 0.87
U2AF1-201ENST00000291552 A0A1W2PQL4 384 aaPredicted RBP20.5■□□□□ 0.87
U2AF1-201ENST00000291552 F8VVB4 439 aa20.5■□□□□ 0.87
U2AF1-201ENST00000291552 F8VWA3 439 aa20.5■□□□□ 0.87
U2AF1-201ENST00000291552 DLX6P56179 175 aa20.5■□□□□ 0.87
U2AF1-201ENST00000291552 LY6EQ16553 131 aa20.5■□□□□ 0.87
U2AF1-201ENST00000291552 YIPF7Q8N8F6 280 aa20.5■□□□□ 0.87
U2AF1-201ENST00000291552 PKIBQ9C010 78 aa20.5■□□□□ 0.87
U2AF1-201ENST00000291552 MEGF9Q9H1U4 602 aa20.5■□□□□ 0.87
U2AF1-201ENST00000291552 SIGLEC9Q9Y336 463 aa20.5■□□□□ 0.87
U2AF1-201ENST00000291552 ANKRD61A6NGH8 418 aa20.49■□□□□ 0.87
U2AF1-201ENST00000291552 TK1P04183 234 aa20.49■□□□□ 0.87
U2AF1-201ENST00000291552 KRT8P05787 483 aa20.49■□□□□ 0.87
U2AF1-201ENST00000291552 HTR1FP30939 366 aa20.49■□□□□ 0.87
U2AF1-201ENST00000291552 IL24Q13007 206 aa20.49■□□□□ 0.87
U2AF1-201ENST00000291552 UBE2V2Q15819 145 aa20.49■□□□□ 0.87
U2AF1-201ENST00000291552 LRRC75BQ2VPJ9 315 aa20.49■□□□□ 0.87
U2AF1-201ENST00000291552 OR2T27Q8NH04 317 aa20.49■□□□□ 0.87
U2AF1-201ENST00000291552 RNF166Q96A37 237 aaPredicted RBP20.49■□□□□ 0.87
U2AF1-201ENST00000291552 GABARAPL3Q9BY60 117 aa20.49■□□□□ 0.87
U2AF1-201ENST00000291552 PIPP12273 146 aaPredicted RBP20.48■□□□□ 0.87
U2AF1-201ENST00000291552 COX7A1P24310 79 aa20.48■□□□□ 0.87
U2AF1-201ENST00000291552 USE1Q9NZ43 259 aa20.48■□□□□ 0.87
U2AF1-201ENST00000291552 MTCH1Q9NZJ7 389 aa20.48■□□□□ 0.87
U2AF1-201ENST00000291552 FBLN5Q9UBX5 448 aa20.48■□□□□ 0.87
U2AF1-201ENST00000291552 FAM230AA0A1W2PPH8 454 aa20.47■□□□□ 0.87
U2AF1-201ENST00000291552 METTL15A6NJ78 407 aa20.47■□□□□ 0.87
U2AF1-201ENST00000291552 ZNF737O75373 536 aa20.47■□□□□ 0.87
U2AF1-201ENST00000291552 OR2T7P0C7T2 308 aa20.47■□□□□ 0.87
U2AF1-201ENST00000291552 GABRA5P31644 462 aa20.47■□□□□ 0.87
U2AF1-201ENST00000291552 ISL1P61371 349 aa20.47■□□□□ 0.87
U2AF1-201ENST00000291552 AANATQ16613 207 aa20.47■□□□□ 0.87
U2AF1-201ENST00000291552 C1orf146Q5VVC0 180 aa20.47■□□□□ 0.87
U2AF1-201ENST00000291552 ZNF782Q6ZMW2 699 aaPredicted RBP20.47■□□□□ 0.87
U2AF1-201ENST00000291552 LHFPL4Q7Z7J7 247 aa20.47■□□□□ 0.87
U2AF1-201ENST00000291552 PRSS35Q8N3Z0 413 aa20.47■□□□□ 0.87
U2AF1-201ENST00000291552 OR10H4Q8NGA5 316 aa20.47■□□□□ 0.87
U2AF1-201ENST00000291552 PIFOQ8TCI5 191 aa20.47■□□□□ 0.87
U2AF1-201ENST00000291552 HEXA-AS1Q9H8Q6 139 aa20.47■□□□□ 0.87
U2AF1-201ENST00000291552 ENOPH1Q9UHY7 261 aa20.47■□□□□ 0.87
U2AF1-201ENST00000291552 OAZ3Q9UMX2 235 aa20.47■□□□□ 0.87
U2AF1-201ENST00000291552 MEX3AA1L020 520 aaKnown RBP20.46■□□□□ 0.87
U2AF1-201ENST00000291552 K7N7A8 449 aa20.46■□□□□ 0.87
U2AF1-201ENST00000291552 CHST1O43916 411 aa20.46■□□□□ 0.87
U2AF1-201ENST00000291552 KIR3DL2P43630 455 aa20.46■□□□□ 0.87
U2AF1-201ENST00000291552 EFNB2P52799 333 aa20.46■□□□□ 0.87
U2AF1-201ENST00000291552 COL10A1Q03692 680 aa20.46■□□□□ 0.87
U2AF1-201ENST00000291552 ZNF85Q03923 595 aa20.46■□□□□ 0.87
U2AF1-201ENST00000291552 HIST2H2BDQ6DRA6 164 aa20.46■□□□□ 0.87
U2AF1-201ENST00000291552 DYNAPQ8N1N2 210 aa20.46■□□□□ 0.87
U2AF1-201ENST00000291552 UBE2FQ969M7 185 aa20.46■□□□□ 0.87
U2AF1-201ENST00000291552 EME1Q96AY2 570 aa20.46■□□□□ 0.87
U2AF1-201ENST00000291552 CHST5Q9GZS9 411 aa20.46■□□□□ 0.87
U2AF1-201ENST00000291552 FAM234AQ9H0X4 552 aa20.46■□□□□ 0.87
U2AF1-201ENST00000291552 RIBC2Q9H4K1 309 aa20.46■□□□□ 0.87
U2AF1-201ENST00000291552 LOC107986453A0A1B0GWG9 222 aa20.45■□□□□ 0.86
U2AF1-201ENST00000291552 C17orf98A8MV24 154 aa20.45■□□□□ 0.86
U2AF1-201ENST00000291552 SYT7O43581 403 aa20.45■□□□□ 0.86
U2AF1-201ENST00000291552 FCGR1AP12314 374 aa20.45■□□□□ 0.86
U2AF1-201ENST00000291552 LDLRAD2Q5SZI1 272 aa20.45■□□□□ 0.86
U2AF1-201ENST00000291552 TCF23Q7RTU1 214 aa20.45■□□□□ 0.86
U2AF1-201ENST00000291552 ASCC1Q8N9N2 400 aaKnown RBP20.45■□□□□ 0.86
U2AF1-201ENST00000291552 OR8J1Q8NGP2 316 aa20.45■□□□□ 0.86
U2AF1-201ENST00000291552 SLAMF9Q96A28 289 aa20.45■□□□□ 0.86
U2AF1-201ENST00000291552 PLEKHA1Q9HB21 404 aa20.45■□□□□ 0.86
U2AF1-201ENST00000291552 IL36RNQ9UBH0 155 aa20.45■□□□□ 0.86
U2AF1-201ENST00000291552 KIAA2026Q5HYC2 2103 aa20.44■□□□□ 0.86
U2AF1-201ENST00000291552 A0A1W2PPH5 198 aa20.44■□□□□ 0.86
U2AF1-201ENST00000291552 SAC3D1A6NKF1 404 aa20.44■□□□□ 0.86
U2AF1-201ENST00000291552 SULT1C4O75897 302 aa20.44■□□□□ 0.86
U2AF1-201ENST00000291552 FAM110DQ8TAY7 271 aaPredicted RBP20.44■□□□□ 0.86
U2AF1-201ENST00000291552 CENPNQ96H22 339 aaPredicted RBP20.44■□□□□ 0.86
U2AF1-201ENST00000291552 CEP19Q96LK0 163 aa20.44■□□□□ 0.86
U2AF1-201ENST00000291552 OSBPL10Q9BXB5 764 aa20.44■□□□□ 0.86
U2AF1-201ENST00000291552 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP20.44■□□□□ 0.86
U2AF1-201ENST00000291552 PLXNB1O43157 2135 aa20.44■□□□□ 0.86
U2AF1-201ENST00000291552 TMEM82A0PJX8 343 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms