RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 MAGEB4O15481 346 aaPredicted RBP10.36□□□□□ -0.75
CD44-203ENST00000278386 CHST1O43916 411 aa10.36□□□□□ -0.75
CD44-203ENST00000278386 TK1P04183 234 aa10.36□□□□□ -0.75
CD44-203ENST00000278386 KIR2DS4P43632 304 aa10.36□□□□□ -0.75
CD44-203ENST00000278386 PTGES3Q15185 160 aaKnown RBP10.36□□□□□ -0.75
CD44-203ENST00000278386 AANATQ16613 207 aa10.36□□□□□ -0.75
CD44-203ENST00000278386 ODF4Q2M2E3 257 aa10.36□□□□□ -0.75
CD44-203ENST00000278386 AJUBAQ96IF1 538 aa10.36□□□□□ -0.75
CD44-203ENST00000278386 ABCB10Q9NRK6 738 aa10.36□□□□□ -0.75
CD44-203ENST00000278386 KRT84Q9NSB2 600 aa10.36□□□□□ -0.75
CD44-203ENST00000278386 V9GYS6 101 aa10.36□□□□□ -0.75
CD44-203ENST00000278386 FAM230AA0A1W2PPH8 454 aa10.35□□□□□ -0.75
CD44-203ENST00000278386 TCRBV3S1A0A5B6 114 aa10.35□□□□□ -0.75
CD44-203ENST00000278386 MEX3AA1L020 520 aaKnown RBP10.35□□□□□ -0.75
CD44-203ENST00000278386 G3V4G9 280 aa10.35□□□□□ -0.75
CD44-203ENST00000278386 SRSF10O75494 262 aaKnown RBP10.35□□□□□ -0.75
CD44-203ENST00000278386 RPP14O95059 124 aaKnown RBP10.35□□□□□ -0.75
CD44-203ENST00000278386 ARG1P05089 322 aa10.35□□□□□ -0.75
CD44-203ENST00000278386 DAPP51397 102 aa10.35□□□□□ -0.75
CD44-203ENST00000278386 EDDM3BP56851 147 aa10.35□□□□□ -0.75
CD44-203ENST00000278386 COL10A1Q03692 680 aa10.35□□□□□ -0.75
CD44-203ENST00000278386 FAM189A2Q15884 450 aa10.35□□□□□ -0.75
CD44-203ENST00000278386 NSUN5P1Q3KNT7 163 aa10.35□□□□□ -0.75
CD44-203ENST00000278386 ARSJQ5FYB0 599 aaPredicted RBP10.35□□□□□ -0.75
CD44-203ENST00000278386 TMEM42Q69YG0 159 aa10.35□□□□□ -0.75
CD44-203ENST00000278386 MEPCEQ7L2J0 689 aaKnown RBP10.35□□□□□ -0.75
CD44-203ENST00000278386 LHFPL4Q7Z7J7 247 aa10.35□□□□□ -0.75
CD44-203ENST00000278386 ANGPTL5Q86XS5 388 aa10.35□□□□□ -0.75
CD44-203ENST00000278386 GID4Q8IVV7 300 aa10.35□□□□□ -0.75
CD44-203ENST00000278386 ELMOD2Q8IZ81 293 aa10.35□□□□□ -0.75
CD44-203ENST00000278386 TCEANCQ8N8B7 351 aa10.35□□□□□ -0.75
CD44-203ENST00000278386 YIPF7Q8N8F6 280 aa10.35□□□□□ -0.75
CD44-203ENST00000278386 OR14K1Q8NGZ2 314 aa10.35□□□□□ -0.75
CD44-203ENST00000278386 FOXRED1Q96CU9 486 aaPredicted RBP10.35□□□□□ -0.75
CD44-203ENST00000278386 NRBF2Q96F24 287 aa10.35□□□□□ -0.75
CD44-203ENST00000278386 MNTQ99583 582 aa10.35□□□□□ -0.75
CD44-203ENST00000278386 TBX5Q99593 518 aa10.35□□□□□ -0.75
CD44-203ENST00000278386 NRIP2Q9BQI9 281 aa10.35□□□□□ -0.75
CD44-203ENST00000278386 ADGRL4Q9HBW9 690 aa10.35□□□□□ -0.75
CD44-203ENST00000278386 SLC7A11Q9UPY5 501 aa10.35□□□□□ -0.75
CD44-203ENST00000278386 SNX5Q9Y5X3 404 aa10.35□□□□□ -0.75
CD44-203ENST00000278386 MITFO75030 526 aaPredicted RBP10.34□□□□□ -0.75
CD44-203ENST00000278386 NOS1APO75052 506 aaPredicted RBP10.34□□□□□ -0.75
CD44-203ENST00000278386 FBXO24O75426 580 aa10.34□□□□□ -0.75
CD44-203ENST00000278386 INMTO95050 263 aa10.34□□□□□ -0.75
CD44-203ENST00000278386 OPN1MWP04001 364 aa10.34□□□□□ -0.75
CD44-203ENST00000278386 KRT8P05787 483 aa10.34□□□□□ -0.75
CD44-203ENST00000278386 OPN1MW2P0DN77 364 aa10.34□□□□□ -0.75
CD44-203ENST00000278386 OPN1MW3P0DN78 364 aa10.34□□□□□ -0.75
CD44-203ENST00000278386 MPZP25189 248 aa10.34□□□□□ -0.75
CD44-203ENST00000278386 NXNL2Q5VZ03 156 aa10.34□□□□□ -0.75
CD44-203ENST00000278386 FAHD1Q6P587 224 aa10.34□□□□□ -0.75
CD44-203ENST00000278386 CRIP3Q6Q6R5 217 aa10.34□□□□□ -0.75
CD44-203ENST00000278386 GDPD3Q7L5L3 318 aa10.34□□□□□ -0.75
CD44-203ENST00000278386 TMEM219Q86XT9 240 aa10.34□□□□□ -0.75
CD44-203ENST00000278386 CALHM1Q8IU99 346 aa10.34□□□□□ -0.75
CD44-203ENST00000278386 LYG1Q8N1E2 194 aa10.34□□□□□ -0.75
CD44-203ENST00000278386 DTX3Q8N9I9 347 aa10.34□□□□□ -0.75
CD44-203ENST00000278386 OR13D1Q8NGV5 346 aa10.34□□□□□ -0.75
CD44-203ENST00000278386 TMEM163Q8TC26 289 aa10.34□□□□□ -0.75
CD44-203ENST00000278386 IL4I1Q96RQ9 567 aa10.34□□□□□ -0.75
CD44-203ENST00000278386 HES4Q9HCC6 221 aa10.34□□□□□ -0.75
CD44-203ENST00000278386 CLN6Q9NWW5 311 aa10.34□□□□□ -0.75
CD44-203ENST00000278386 MRM2Q9UI43 246 aaKnown RBP10.34□□□□□ -0.75
CD44-203ENST00000278386 SLC22A13Q9Y226 551 aa10.34□□□□□ -0.75
CD44-203ENST00000278386 POMPQ9Y244 141 aa10.34□□□□□ -0.75
CD44-203ENST00000278386 TBL2Q9Y4P3 447 aaKnown RBP10.34□□□□□ -0.75
CD44-203ENST00000278386 A0A1B0GTI1 187 aa10.33□□□□□ -0.76
CD44-203ENST00000278386 DHRS7CA6NNS2 312 aa10.33□□□□□ -0.76
CD44-203ENST00000278386 SYT7O43581 403 aa10.33□□□□□ -0.76
CD44-203ENST00000278386 PEX14O75381 377 aa10.33□□□□□ -0.76
CD44-203ENST00000278386 DNAJC8O75937 253 aaPredicted RBP10.33□□□□□ -0.76
CD44-203ENST00000278386 IL24Q13007 206 aa10.33□□□□□ -0.76
CD44-203ENST00000278386 DYNC1I2Q13409 638 aaKnown RBP10.33□□□□□ -0.76
CD44-203ENST00000278386 EDDM3AQ14507 147 aa10.33□□□□□ -0.76
CD44-203ENST00000278386 HABP2Q14520 560 aaPredicted RBP10.33□□□□□ -0.76
CD44-203ENST00000278386 BEAN1Q3B7T3 259 aa10.33□□□□□ -0.76
CD44-203ENST00000278386 SLX4IPQ5VYV7 408 aa10.33□□□□□ -0.76
CD44-203ENST00000278386 C11orf42Q8N5U0 333 aa10.33□□□□□ -0.76
CD44-203ENST00000278386 RPS4Y2Q8TD47 263 aa10.33□□□□□ -0.76
CD44-203ENST00000278386 CFHR4Q92496 578 aa10.33□□□□□ -0.76
CD44-203ENST00000278386 SLAMF9Q96A28 289 aa10.33□□□□□ -0.76
CD44-203ENST00000278386 CEP19Q96LK0 163 aa10.33□□□□□ -0.76
CD44-203ENST00000278386 CADM1Q9BY67 442 aaKnown RBP10.33□□□□□ -0.76
CD44-203ENST00000278386 PKIBQ9C010 78 aa10.33□□□□□ -0.76
CD44-203ENST00000278386 ZNF702PQ9H963 129 aa10.33□□□□□ -0.76
CD44-203ENST00000278386 TCF19Q9Y242 345 aa10.33□□□□□ -0.76
CD44-203ENST00000278386 ZAR1LA6NP61 321 aa10.32□□□□□ -0.76
CD44-203ENST00000278386 C17orf98A8MV24 154 aa10.32□□□□□ -0.76
CD44-203ENST00000278386 ODF3BA8MYP8 253 aa10.32□□□□□ -0.76
CD44-203ENST00000278386 K7N7A8 449 aa10.32□□□□□ -0.76
CD44-203ENST00000278386 F2RL2O00254 374 aa10.32□□□□□ -0.76
CD44-203ENST00000278386 GATBO75879 557 aaKnown RBP10.32□□□□□ -0.76
CD44-203ENST00000278386 APOL3O95236 402 aa10.32□□□□□ -0.76
CD44-203ENST00000278386 PRB2P02812 416 aaPredicted RBP10.32□□□□□ -0.76
CD44-203ENST00000278386 CHRM2P08172 466 aa10.32□□□□□ -0.76
CD44-203ENST00000278386 ZNF728P0DKX0 622 aa10.32□□□□□ -0.76
CD44-203ENST00000278386 RAB13P51153 203 aa10.32□□□□□ -0.76
CD44-203ENST00000278386 DLX6P56179 175 aa10.32□□□□□ -0.76
CD44-203ENST00000278386 CNN3Q15417 329 aaKnown RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms