RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 DUSP21Q9H596 190 aa10.56□□□□□ -0.72
SHPRH-201ENST00000275233 HRKO00198 91 aa10.55□□□□□ -0.72
SHPRH-201ENST00000275233 PRRX1P54821 245 aa10.55□□□□□ -0.72
SHPRH-201ENST00000275233 Q8IYB0 196 aa10.55□□□□□ -0.72
SHPRH-201ENST00000275233 EID2BQ96D98 161 aa10.55□□□□□ -0.72
SHPRH-201ENST00000275233 ZMIZ1Q9ULJ6 1067 aa10.55□□□□□ -0.72
SHPRH-201ENST00000275233 A0A1B0GUH1 482 aa10.55□□□□□ -0.72
SHPRH-201ENST00000275233 ATXN7O15265 892 aaPredicted RBP10.55□□□□□ -0.72
SHPRH-201ENST00000275233 RNF224P0DH78 156 aa10.55□□□□□ -0.72
SHPRH-201ENST00000275233 Q6ZNX1 250 aa10.55□□□□□ -0.72
SHPRH-201ENST00000275233 OR1B1Q8NGR6 318 aa10.55□□□□□ -0.72
SHPRH-201ENST00000275233 SPSB1Q96BD6 273 aa10.55□□□□□ -0.72
SHPRH-201ENST00000275233 MMP7P09237 267 aaPredicted RBP10.55□□□□□ -0.72
SHPRH-201ENST00000275233 RND1Q92730 232 aa10.55□□□□□ -0.72
SHPRH-201ENST00000275233 CXXC4Q9H2H0 198 aa10.55□□□□□ -0.72
SHPRH-201ENST00000275233 NIT2Q9NQR4 276 aa10.55□□□□□ -0.72
SHPRH-201ENST00000275233 SCN3AQ9NY46 2000 aa10.55□□□□□ -0.72
SHPRH-201ENST00000275233 K7ESF4 209 aa10.55□□□□□ -0.72
SHPRH-201ENST00000275233 CDC34P49427 236 aaPredicted RBP10.55□□□□□ -0.72
SHPRH-201ENST00000275233 TMEM128Q5BJH2 165 aa10.55□□□□□ -0.72
SHPRH-201ENST00000275233 C12orf73Q69YU5 71 aa10.55□□□□□ -0.72
SHPRH-201ENST00000275233 DGAT2L6Q6ZPD8 337 aa10.55□□□□□ -0.72
SHPRH-201ENST00000275233 SH2D5Q6ZV89 423 aa10.55□□□□□ -0.72
SHPRH-201ENST00000275233 OR4F17Q8NGA8 305 aa10.55□□□□□ -0.72
SHPRH-201ENST00000275233 SRRQ9GZT4 340 aa10.55□□□□□ -0.72
SHPRH-201ENST00000275233 CNTD2Q9H8S5 307 aa10.55□□□□□ -0.72
SHPRH-201ENST00000275233 ZDHHC11Q9H8X9 412 aa10.55□□□□□ -0.72
SHPRH-201ENST00000275233 KCNE1BA0A087WTH5 132 aa10.55□□□□□ -0.72
SHPRH-201ENST00000275233 FXYD1O00168 92 aa10.55□□□□□ -0.72
SHPRH-201ENST00000275233 HRASP01112 189 aa10.55□□□□□ -0.72
SHPRH-201ENST00000275233 CPN1P15169 458 aa10.55□□□□□ -0.72
SHPRH-201ENST00000275233 GVQW1Q8N7I0 195 aa10.55□□□□□ -0.72
SHPRH-201ENST00000275233 DPF1Q92782 380 aa10.55□□□□□ -0.72
SHPRH-201ENST00000275233 EML2O95834 649 aa10.54□□□□□ -0.72
SHPRH-201ENST00000275233 PMCHP20382 165 aa10.54□□□□□ -0.72
SHPRH-201ENST00000275233 APOBEC4Q8WW27 367 aaKnown RBP10.54□□□□□ -0.72
SHPRH-201ENST00000275233 ALG14Q96F25 216 aa10.54□□□□□ -0.72
SHPRH-201ENST00000275233 GABRG3Q99928 467 aa10.54□□□□□ -0.72
SHPRH-201ENST00000275233 GSX2Q9BZM3 304 aa10.54□□□□□ -0.72
SHPRH-201ENST00000275233 COL22A1Q8NFW1 1626 aaPredicted RBP10.54□□□□□ -0.72
SHPRH-201ENST00000275233 IGHV5-10-1A0A0J9YXX1 117 aa10.54□□□□□ -0.72
SHPRH-201ENST00000275233 C3orf85A0A1B0GTC6 90 aa10.54□□□□□ -0.72
SHPRH-201ENST00000275233 SRD5A2P31213 254 aa10.54□□□□□ -0.72
SHPRH-201ENST00000275233 AMTP48728 403 aa10.54□□□□□ -0.72
SHPRH-201ENST00000275233 MMP15P51511 669 aa10.54□□□□□ -0.72
SHPRH-201ENST00000275233 SLC16A12Q6ZSM3 486 aa10.54□□□□□ -0.72
SHPRH-201ENST00000275233 SPRED2Q7Z698 418 aa10.54□□□□□ -0.72
SHPRH-201ENST00000275233 CALHM3Q86XJ0 350 aa10.54□□□□□ -0.72
SHPRH-201ENST00000275233 BAP18Q8IXM2 172 aa10.54□□□□□ -0.72
SHPRH-201ENST00000275233 PTPMT1Q8WUK0 201 aaPredicted RBP10.54□□□□□ -0.72
SHPRH-201ENST00000275233 MSL2Q9HCI7 577 aa10.54□□□□□ -0.72
SHPRH-201ENST00000275233 HIST1H1DP16402 221 aaKnown RBP10.54□□□□□ -0.72
SHPRH-201ENST00000275233 CTLA4P16410 223 aa10.54□□□□□ -0.72
SHPRH-201ENST00000275233 BCL3P20749 454 aa10.54□□□□□ -0.72
SHPRH-201ENST00000275233 FGF8P55075 233 aaPredicted RBP10.54□□□□□ -0.72
SHPRH-201ENST00000275233 CDK5Q00535 292 aa10.54□□□□□ -0.72
SHPRH-201ENST00000275233 HLXQ14774 488 aaPredicted RBP10.54□□□□□ -0.72
SHPRH-201ENST00000275233 C1QL3Q5VWW1 255 aa10.54□□□□□ -0.72
SHPRH-201ENST00000275233 MOGAT3Q86VF5 341 aa10.54□□□□□ -0.72
SHPRH-201ENST00000275233 ZNF683Q8IZ20 524 aa10.54□□□□□ -0.72
SHPRH-201ENST00000275233 ZNF768Q9H5H4 540 aaKnown RBP10.54□□□□□ -0.72
SHPRH-201ENST00000275233 IL20Q9NYY1 176 aa10.54□□□□□ -0.72
SHPRH-201ENST00000275233 SPP1P10451 314 aa10.54□□□□□ -0.72
SHPRH-201ENST00000275233 PNLIPP16233 465 aa10.54□□□□□ -0.72
SHPRH-201ENST00000275233 BMI1P35226 326 aa10.54□□□□□ -0.72
SHPRH-201ENST00000275233 FOXO1Q12778 655 aa10.54□□□□□ -0.72
SHPRH-201ENST00000275233 THSD4Q6ZMP0 1018 aa10.54□□□□□ -0.72
SHPRH-201ENST00000275233 RSRP1Q9BUV0 290 aa10.54□□□□□ -0.72
SHPRH-201ENST00000275233 SMCHD1A6NHR9 2005 aa10.54□□□□□ -0.72
SHPRH-201ENST00000275233 FABP4P15090 132 aa10.54□□□□□ -0.72
SHPRH-201ENST00000275233 PAX5Q02548 391 aa10.54□□□□□ -0.72
SHPRH-201ENST00000275233 HIKESHIQ53FT3 197 aa10.54□□□□□ -0.72
SHPRH-201ENST00000275233 VN1R4Q7Z5H5 301 aa10.54□□□□□ -0.72
SHPRH-201ENST00000275233 SFTPA2Q8IWL1 248 aa10.54□□□□□ -0.72
SHPRH-201ENST00000275233 TRAPPC4Q9Y296 219 aa10.54□□□□□ -0.72
SHPRH-201ENST00000275233 ZFPL1O95159 310 aa10.53□□□□□ -0.72
SHPRH-201ENST00000275233 LIMS3P0CW19 117 aa10.53□□□□□ -0.72
SHPRH-201ENST00000275233 LIMS4P0CW20 117 aa10.53□□□□□ -0.72
SHPRH-201ENST00000275233 SELENOPP49908 381 aa10.53□□□□□ -0.72
SHPRH-201ENST00000275233 SLC25A1P53007 311 aa10.53□□□□□ -0.72
SHPRH-201ENST00000275233 ABHD3Q8WU67 409 aa10.53□□□□□ -0.72
SHPRH-201ENST00000275233 ASB10Q8WXI3 467 aa10.53□□□□□ -0.72
SHPRH-201ENST00000275233 RASL10BQ96S79 203 aa10.53□□□□□ -0.72
SHPRH-201ENST00000275233 PCOLCE2Q9UKZ9 415 aa10.53□□□□□ -0.72
SHPRH-201ENST00000275233 BHLHA9Q7RTU4 235 aa10.53□□□□□ -0.72
SHPRH-201ENST00000275233 OR8B12Q8NGG6 310 aa10.53□□□□□ -0.72
SHPRH-201ENST00000275233 IGLV3-16A0A075B6K0 115 aa10.53□□□□□ -0.72
SHPRH-201ENST00000275233 SNRPGP15A8MWD9 76 aa10.53□□□□□ -0.72
SHPRH-201ENST00000275233 CD96P40200 585 aa10.53□□□□□ -0.72
SHPRH-201ENST00000275233 TGIF2LYQ8IUE0 185 aa10.53□□□□□ -0.72
SHPRH-201ENST00000275233 TMPRSS5Q9H3S3 457 aa10.53□□□□□ -0.72
SHPRH-201ENST00000275233 CACNG5Q9UF02 275 aa10.53□□□□□ -0.72
SHPRH-201ENST00000275233 AMMECR1Q9Y4X0 333 aaPredicted RBP10.53□□□□□ -0.72
SHPRH-201ENST00000275233 TUBAL3A6NHL2 446 aa10.53□□□□□ -0.72
SHPRH-201ENST00000275233 BCL2L11O43521 198 aa10.53□□□□□ -0.72
SHPRH-201ENST00000275233 OR4A8P0C604 315 aa10.53□□□□□ -0.72
SHPRH-201ENST00000275233 FPR2P25090 351 aa10.53□□□□□ -0.72
SHPRH-201ENST00000275233 SUMO1P63165 101 aaKnown RBP10.53□□□□□ -0.72
SHPRH-201ENST00000275233 SLC38A11Q08AI6 406 aa10.53□□□□□ -0.72
SHPRH-201ENST00000275233 MIDNQ504T8 468 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms