RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 SSBP1Q04837 148 aaKnown RBP12.59□□□□□ -0.39
PDLIM2-201ENST00000265810 TMEM229BQ8NBD8 167 aa12.59□□□□□ -0.39
PDLIM2-201ENST00000265810 LINC00470Q9BZP3 86 aa12.59□□□□□ -0.39
PDLIM2-201ENST00000265810 RIMS4Q9H426 269 aaPredicted RBP12.59□□□□□ -0.39
PDLIM2-201ENST00000265810 EDARQ9UNE0 448 aa12.59□□□□□ -0.39
PDLIM2-201ENST00000265810 PDCD6O75340 191 aa12.59□□□□□ -0.39
PDLIM2-201ENST00000265810 CEBPGP53567 150 aa12.59□□□□□ -0.39
PDLIM2-201ENST00000265810 CCL17Q92583 94 aa12.59□□□□□ -0.39
PDLIM2-201ENST00000265810 YIPF5Q969M3 257 aa12.59□□□□□ -0.39
PDLIM2-201ENST00000265810 DIDO1Q9BTC0 2240 aaKnown RBP12.59□□□□□ -0.39
PDLIM2-201ENST00000265810 C3orf80F5H4A9 247 aa12.59□□□□□ -0.39
PDLIM2-201ENST00000265810 ECI1P42126 302 aa12.59□□□□□ -0.39
PDLIM2-201ENST00000265810 LIMK1P53667 647 aa12.59□□□□□ -0.39
PDLIM2-201ENST00000265810 KLRB1Q12918 225 aa12.59□□□□□ -0.39
PDLIM2-201ENST00000265810 CXXC4Q9H2H0 198 aa12.59□□□□□ -0.39
PDLIM2-201ENST00000265810 TUBAL3A6NHL2 446 aa12.59□□□□□ -0.39
PDLIM2-201ENST00000265810 MECP2P51608 486 aaKnown RBP12.59□□□□□ -0.39
PDLIM2-201ENST00000265810 OR14K1Q8NGZ2 314 aa12.59□□□□□ -0.39
PDLIM2-201ENST00000265810 SMLR1H3BR10 107 aa12.58□□□□□ -0.4
PDLIM2-201ENST00000265810 CCSO14618 274 aa12.58□□□□□ -0.4
PDLIM2-201ENST00000265810 GEMIN2O14893 280 aaKnown RBP12.58□□□□□ -0.4
PDLIM2-201ENST00000265810 NGFP01138 241 aa12.58□□□□□ -0.4
PDLIM2-201ENST00000265810 CPN1P15169 458 aa12.58□□□□□ -0.4
PDLIM2-201ENST00000265810 SSTR2P30874 369 aa12.58□□□□□ -0.4
PDLIM2-201ENST00000265810 GK2Q14410 553 aaPredicted RBP12.58□□□□□ -0.4
PDLIM2-201ENST00000265810 MICBQ29980 383 aa12.58□□□□□ -0.4
PDLIM2-201ENST00000265810 BEX5Q5H9J7 111 aa12.58□□□□□ -0.4
PDLIM2-201ENST00000265810 Q6ZT83 130 aa12.58□□□□□ -0.4
PDLIM2-201ENST00000265810 TMEM123Q8N131 208 aa12.58□□□□□ -0.4
PDLIM2-201ENST00000265810 SPRR3Q9UBC9 169 aa12.58□□□□□ -0.4
PDLIM2-201ENST00000265810 ARPC4-TTLL3A0A0A6YYG9 625 aa12.58□□□□□ -0.4
PDLIM2-201ENST00000265810 RNF212BA8MTL3 300 aa12.58□□□□□ -0.4
PDLIM2-201ENST00000265810 RGS11O94810 467 aa12.58□□□□□ -0.4
PDLIM2-201ENST00000265810 PDZK1IP1Q13113 114 aa12.58□□□□□ -0.4
PDLIM2-201ENST00000265810 ABLIM2Q6H8Q1 611 aa12.58□□□□□ -0.4
PDLIM2-201ENST00000265810 FDX2Q6P4F2 183 aa12.58□□□□□ -0.4
PDLIM2-201ENST00000265810 ZNF546Q86UE3 836 aa12.58□□□□□ -0.4
PDLIM2-201ENST00000265810 GGNQ86UU5 652 aa12.58□□□□□ -0.4
PDLIM2-201ENST00000265810 OR5A2Q8NGI9 324 aa12.58□□□□□ -0.4
PDLIM2-201ENST00000265810 SCGB1C1Q8TD33 95 aa12.58□□□□□ -0.4
PDLIM2-201ENST00000265810 GP6Q9HCN6 339 aa12.58□□□□□ -0.4
PDLIM2-201ENST00000265810 TREM2Q9NZC2 230 aa12.58□□□□□ -0.4
PDLIM2-201ENST00000265810 A0A0A6YYJ9 748 aa12.58□□□□□ -0.4
PDLIM2-201ENST00000265810 ZNF716A6NP11 495 aa12.58□□□□□ -0.4
PDLIM2-201ENST00000265810 NFYAP23511 347 aaPredicted RBP12.58□□□□□ -0.4
PDLIM2-201ENST00000265810 ZNF79Q15937 498 aa12.58□□□□□ -0.4
PDLIM2-201ENST00000265810 UNQ9370/PRO34162Q6UXP9 181 aa12.58□□□□□ -0.4
PDLIM2-201ENST00000265810 FYTTD1Q96QD9 318 aaKnown RBP12.58□□□□□ -0.4
PDLIM2-201ENST00000265810 ASCL3Q9NQ33 180 aa12.58□□□□□ -0.4
PDLIM2-201ENST00000265810 ASF1BQ9NVP2 202 aa12.58□□□□□ -0.4
PDLIM2-201ENST00000265810 SMCO3A2RU48 225 aa12.57□□□□□ -0.4
PDLIM2-201ENST00000265810 SSX4O60224 188 aa12.57□□□□□ -0.4
PDLIM2-201ENST00000265810 CALCRP30988 508 aa12.57□□□□□ -0.4
PDLIM2-201ENST00000265810 NHLH1Q02575 133 aa12.57□□□□□ -0.4
PDLIM2-201ENST00000265810 FOXO1Q12778 655 aa12.57□□□□□ -0.4
PDLIM2-201ENST00000265810 PLGLAQ15195 96 aa12.57□□□□□ -0.4
PDLIM2-201ENST00000265810 TERB2Q8NHR7 220 aa12.57□□□□□ -0.4
PDLIM2-201ENST00000265810 MRPS24Q96EL2 167 aaKnown RBP12.57□□□□□ -0.4
PDLIM2-201ENST00000265810 ZNF486Q96H40 463 aaPredicted RBP12.57□□□□□ -0.4
PDLIM2-201ENST00000265810 CHST6Q9GZX3 395 aa12.57□□□□□ -0.4
PDLIM2-201ENST00000265810 DLL3Q9NYJ7 618 aa12.57□□□□□ -0.4
PDLIM2-201ENST00000265810 PCDHGA9Q9Y5G4 932 aaKnown RBP12.57□□□□□ -0.4
PDLIM2-201ENST00000265810 PCDH15Q96QU1 1955 aa12.57□□□□□ -0.4
PDLIM2-201ENST00000265810 KIAA1549LQ6ZVL6 1849 aa12.57□□□□□ -0.4
PDLIM2-201ENST00000265810 SHISA3A0PJX4 238 aa12.57□□□□□ -0.4
PDLIM2-201ENST00000265810 ABCD4O14678 606 aa12.57□□□□□ -0.4
PDLIM2-201ENST00000265810 FSTP19883 344 aa12.57□□□□□ -0.4
PDLIM2-201ENST00000265810 C9orf106Q8NAJ2 232 aa12.57□□□□□ -0.4
PDLIM2-201ENST00000265810 NPAP1Q9NZP6 1156 aa12.57□□□□□ -0.4
PDLIM2-201ENST00000265810 MYO7BQ6PIF6 2116 aa12.57□□□□□ -0.4
PDLIM2-201ENST00000265810 RANBP2P49792 3224 aaKnown RBP12.57□□□□□ -0.4
PDLIM2-201ENST00000265810 TRBV5-7A0A0A0MS05 114 aa12.57□□□□□ -0.4
PDLIM2-201ENST00000265810 A0A1W2PP11 408 aa12.57□□□□□ -0.4
PDLIM2-201ENST00000265810 PYCARD-AS1I3L0S3 204 aa12.57□□□□□ -0.4
PDLIM2-201ENST00000265810 CBR1P16152 277 aa12.57□□□□□ -0.4
PDLIM2-201ENST00000265810 PTAFRP25105 342 aa12.57□□□□□ -0.4
PDLIM2-201ENST00000265810 IAH1Q2TAA2 248 aaPredicted RBP12.57□□□□□ -0.4
PDLIM2-201ENST00000265810 CD276Q5ZPR3 534 aa12.57□□□□□ -0.4
PDLIM2-201ENST00000265810 H3F3CQ6NXT2 135 aa12.57□□□□□ -0.4
PDLIM2-201ENST00000265810 C17orf107Q6ZR85 190 aa12.57□□□□□ -0.4
PDLIM2-201ENST00000265810 ZNF808Q8N4W9 903 aaPredicted RBP12.57□□□□□ -0.4
PDLIM2-201ENST00000265810 MDS2Q8NDY4 140 aa12.57□□□□□ -0.4
PDLIM2-201ENST00000265810 NXF2Q9GZY0 626 aaKnown RBP12.57□□□□□ -0.4
PDLIM2-201ENST00000265810 ZNF106Q9H2Y7 1883 aaKnown RBP12.57□□□□□ -0.4
PDLIM2-201ENST00000265810 IFNA2P01563 188 aa12.57□□□□□ -0.4
PDLIM2-201ENST00000265810 IFNA5P01569 189 aa12.57□□□□□ -0.4
PDLIM2-201ENST00000265810 ZNF709Q8N972 641 aa12.57□□□□□ -0.4
PDLIM2-201ENST00000265810 SEH1LQ96EE3 360 aa12.57□□□□□ -0.4
PDLIM2-201ENST00000265810 NUP50Q9UKX7 468 aa12.57□□□□□ -0.4
PDLIM2-201ENST00000265810 ATXN7O15265 892 aaPredicted RBP12.56□□□□□ -0.4
PDLIM2-201ENST00000265810 BCL3P20749 454 aa12.56□□□□□ -0.4
PDLIM2-201ENST00000265810 S100A1P23297 94 aa12.56□□□□□ -0.4
PDLIM2-201ENST00000265810 GFRA1P56159 465 aa12.56□□□□□ -0.4
PDLIM2-201ENST00000265810 RTP5Q14D33 572 aa12.56□□□□□ -0.4
PDLIM2-201ENST00000265810 ACSF3Q4G176 576 aaPredicted RBP12.56□□□□□ -0.4
PDLIM2-201ENST00000265810 PLPPR2Q96GM1 343 aa12.56□□□□□ -0.4
PDLIM2-201ENST00000265810 GPR137Q96N19 417 aa12.56□□□□□ -0.4
PDLIM2-201ENST00000265810 PPP1R3CQ9UQK1 317 aa12.56□□□□□ -0.4
PDLIM2-201ENST00000265810 DOCK7Q96N67 2140 aa12.56□□□□□ -0.4
PDLIM2-201ENST00000265810 CDRT15L2A8MXV6 281 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms