RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 KANTRA0A1W2PQU2 76 aa9.63□□□□□ -0.87
MSH3-201ENST00000265081 PPIAP62937 165 aaKnown RBP9.63□□□□□ -0.87
MSH3-201ENST00000265081 OR1C1Q15619 314 aa9.63□□□□□ -0.87
MSH3-201ENST00000265081 TMEM211Q6ICI0 200 aa9.63□□□□□ -0.87
MSH3-201ENST00000265081 LRRC20Q8TCA0 184 aa9.63□□□□□ -0.87
MSH3-201ENST00000265081 SEC22AQ96IW7 307 aa9.63□□□□□ -0.87
MSH3-201ENST00000265081 OR10C1Q96KK4 312 aa9.63□□□□□ -0.87
MSH3-201ENST00000265081 SLC7A10Q9NS82 523 aa9.63□□□□□ -0.87
MSH3-201ENST00000265081 PARPBPQ9NWS1 579 aa9.63□□□□□ -0.87
MSH3-201ENST00000265081 ZNF581Q9P0T4 197 aa9.63□□□□□ -0.87
MSH3-201ENST00000265081 B4GALT7Q9UBV7 327 aa9.63□□□□□ -0.87
MSH3-201ENST00000265081 SPENQ96T58 3664 aaKnown RBP9.63□□□□□ -0.87
MSH3-201ENST00000265081 WDR87Q6ZQQ6 2873 aa9.63□□□□□ -0.87
MSH3-201ENST00000265081 MT-CO3P00414 261 aa9.63□□□□□ -0.87
MSH3-201ENST00000265081 PLEKHN1Q494U1 663 aaPredicted RBP9.63□□□□□ -0.87
MSH3-201ENST00000265081 PAN3Q58A45 887 aaKnown RBP9.63□□□□□ -0.87
MSH3-201ENST00000265081 PABPC1L2AQ5JQF8 200 aa9.63□□□□□ -0.87
MSH3-201ENST00000265081 C10orf91Q5T1B1 145 aa9.63□□□□□ -0.87
MSH3-201ENST00000265081 DPPA2Q7Z7J5 298 aa9.63□□□□□ -0.87
MSH3-201ENST00000265081 OSR2Q8N2R0 312 aa9.63□□□□□ -0.87
MSH3-201ENST00000265081 ZFP62Q8NB50 900 aaPredicted RBP9.63□□□□□ -0.87
MSH3-201ENST00000265081 SLC5A7Q9GZV3 580 aa9.63□□□□□ -0.87
MSH3-201ENST00000265081 IFT22Q9H7X7 185 aa9.63□□□□□ -0.87
MSH3-201ENST00000265081 CSAG2Q9Y5P2 127 aa9.63□□□□□ -0.87
MSH3-201ENST00000265081 GLRA1P23415 457 aa9.63□□□□□ -0.87
MSH3-201ENST00000265081 ARFRP1Q13795 201 aa9.63□□□□□ -0.87
MSH3-201ENST00000265081 RNPS1Q15287 305 aaKnown RBP9.63□□□□□ -0.87
MSH3-201ENST00000265081 THAP6Q8TBB0 222 aa9.63□□□□□ -0.87
MSH3-201ENST00000265081 NPRL2Q8WTW4 380 aa9.63□□□□□ -0.87
MSH3-201ENST00000265081 RSRP1Q9BUV0 290 aa9.63□□□□□ -0.87
MSH3-201ENST00000265081 ST6GALNAC5Q9BVH7 336 aa9.63□□□□□ -0.87
MSH3-201ENST00000265081 OPA3Q9H6K4 179 aa9.63□□□□□ -0.87
MSH3-201ENST00000265081 TRIOBPQ9H2D6 2365 aa9.62□□□□□ -0.87
MSH3-201ENST00000265081 MPTX1A8MV57 137 aa9.62□□□□□ -0.87
MSH3-201ENST00000265081 ACTL6AO96019 429 aa9.62□□□□□ -0.87
MSH3-201ENST00000265081 CSTBP04080 98 aaKnown RBP9.62□□□□□ -0.87
MSH3-201ENST00000265081 JMJD7P0C870 316 aa9.62□□□□□ -0.87
MSH3-201ENST00000265081 KCNJ3P48549 501 aa9.62□□□□□ -0.87
MSH3-201ENST00000265081 UQCC3Q6UW78 93 aa9.62□□□□□ -0.87
MSH3-201ENST00000265081 TMEM251Q8N6I4 163 aa9.62□□□□□ -0.87
MSH3-201ENST00000265081 PDCD10Q9BUL8 212 aa9.62□□□□□ -0.87
MSH3-201ENST00000265081 NECAP2Q9NVZ3 263 aa9.62□□□□□ -0.87
MSH3-201ENST00000265081 PFDN2Q9UHV9 154 aa9.62□□□□□ -0.87
MSH3-201ENST00000265081 GPR160Q9UJ42 338 aa9.62□□□□□ -0.87
MSH3-201ENST00000265081 NOSIPQ9Y314 301 aaKnown RBP9.62□□□□□ -0.87
MSH3-201ENST00000265081 LOC105371267A0A1B0GV96 52 aa9.62□□□□□ -0.87
MSH3-201ENST00000265081 SPRY1O43609 319 aaPredicted RBP9.62□□□□□ -0.87
MSH3-201ENST00000265081 SPDEFO95238 335 aa9.62□□□□□ -0.87
MSH3-201ENST00000265081 IFNA2P01563 188 aa9.62□□□□□ -0.87
MSH3-201ENST00000265081 WNT2P09544 360 aa9.62□□□□□ -0.87
MSH3-201ENST00000265081 ZNF806P0C7X5 589 aa9.62□□□□□ -0.87
MSH3-201ENST00000265081 FAM157CP0CG43 387 aa9.62□□□□□ -0.87
MSH3-201ENST00000265081 CHRFAM7AQ494W8 412 aa9.62□□□□□ -0.87
MSH3-201ENST00000265081 LDLRAD3Q86YD5 345 aa9.62□□□□□ -0.87
MSH3-201ENST00000265081 GTF3AQ92664 365 aaKnown RBP9.62□□□□□ -0.87
MSH3-201ENST00000265081 C18orf12Q96KH6 178 aa9.62□□□□□ -0.87
MSH3-201ENST00000265081 POM121L2Q96KW2 1035 aa9.62□□□□□ -0.87
MSH3-201ENST00000265081 PLEKHJ1Q9NW61 149 aa9.62□□□□□ -0.87
MSH3-201ENST00000265081 TRBV6-6A0A0A6YYG2 114 aa9.62□□□□□ -0.87
MSH3-201ENST00000265081 LCATP04180 440 aa9.62□□□□□ -0.87
MSH3-201ENST00000265081 SFTPBP07988 381 aa9.62□□□□□ -0.87
MSH3-201ENST00000265081 LUMP51884 338 aaPredicted RBP9.62□□□□□ -0.87
MSH3-201ENST00000265081 SPEM2Q0P670 501 aa9.62□□□□□ -0.87
MSH3-201ENST00000265081 RBM39Q14498 530 aaKnown RBP9.62□□□□□ -0.87
MSH3-201ENST00000265081 RSU1Q15404 277 aa9.62□□□□□ -0.87
MSH3-201ENST00000265081 PIP4P1Q86T03 277 aa9.62□□□□□ -0.87
MSH3-201ENST00000265081 HPSE2Q8WWQ2 592 aa9.62□□□□□ -0.87
MSH3-201ENST00000265081 MARS2Q96GW9 593 aaKnown RBP9.62□□□□□ -0.87
MSH3-201ENST00000265081 HDHD3Q9BSH5 251 aaPredicted RBP9.62□□□□□ -0.87
MSH3-201ENST00000265081 RAB19A4D1S5 217 aa9.61□□□□□ -0.87
MSH3-201ENST00000265081 POM121CA8CG34 1229 aa9.61□□□□□ -0.87
MSH3-201ENST00000265081 PDCD6O75340 191 aa9.61□□□□□ -0.87
MSH3-201ENST00000265081 SERPINA5P05154 406 aa9.61□□□□□ -0.87
MSH3-201ENST00000265081 SP1P08047 785 aa9.61□□□□□ -0.87
MSH3-201ENST00000265081 PATE4P0C8F1 98 aa9.61□□□□□ -0.87
MSH3-201ENST00000265081 VAMP1P23763 118 aa9.61□□□□□ -0.87
MSH3-201ENST00000265081 TMEM187Q14656 261 aa9.61□□□□□ -0.87
MSH3-201ENST00000265081 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.61□□□□□ -0.87
MSH3-201ENST00000265081 LINC00596Q86U02 117 aa9.61□□□□□ -0.87
MSH3-201ENST00000265081 MOB3AQ96BX8 217 aa9.61□□□□□ -0.87
MSH3-201ENST00000265081 BORCS8Q96FH0 119 aa9.61□□□□□ -0.87
MSH3-201ENST00000265081 S100A13Q99584 98 aa9.61□□□□□ -0.87
MSH3-201ENST00000265081 FAAP24Q9BTP7 215 aa9.61□□□□□ -0.87
MSH3-201ENST00000265081 HES7Q9BYE0 225 aa9.61□□□□□ -0.87
MSH3-201ENST00000265081 C11orf1Q9H5F2 150 aa9.61□□□□□ -0.87
MSH3-201ENST00000265081 ZDHHC11Q9H8X9 412 aa9.61□□□□□ -0.87
MSH3-201ENST00000265081 C1orf123Q9NWV4 160 aa9.61□□□□□ -0.87
MSH3-201ENST00000265081 GLS2Q9UI32 602 aa9.61□□□□□ -0.87
MSH3-201ENST00000265081 NUDT19A8MXV4 375 aa9.61□□□□□ -0.87
MSH3-201ENST00000265081 NAPSAO96009 420 aa9.61□□□□□ -0.87
MSH3-201ENST00000265081 MAGEA5P43359 124 aa9.61□□□□□ -0.87
MSH3-201ENST00000265081 ARF1P84077 181 aaKnown RBP9.61□□□□□ -0.87
MSH3-201ENST00000265081 SNTB1Q13884 538 aaKnown RBP9.61□□□□□ -0.87
MSH3-201ENST00000265081 GUSBP1Q15486 140 aa9.61□□□□□ -0.87
MSH3-201ENST00000265081 TUSC1Q2TAM9 212 aa9.61□□□□□ -0.87
MSH3-201ENST00000265081 ARV1Q9H2C2 271 aa9.61□□□□□ -0.87
MSH3-201ENST00000265081 RHOFQ9HBH0 211 aa9.61□□□□□ -0.87
MSH3-201ENST00000265081 PCDHB16Q9NRJ7 776 aa9.61□□□□□ -0.87
MSH3-201ENST00000265081 J3QW42 95 aa9.61□□□□□ -0.87
MSH3-201ENST00000265081 SDCBPO00560 298 aaPredicted RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms