RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 CDC14BO60729 498 aa8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 KDM4BO94953 1096 aa8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 ZNF205O95201 554 aa8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 HPXP02790 462 aa8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 TFF1P04155 84 aa8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 MPZP25189 248 aa8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 S100A5P33763 92 aa8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 ART1P52961 327 aa8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 MOGAT2Q3SYC2 334 aa8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 UBE2NLQ5JXB2 153 aa8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 FAM201AQ5SY85 155 aa8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 C11orf71Q6IPW1 123 aa8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 CNIH2Q6PI25 160 aa8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 WDR82Q6UXN9 313 aa8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 BOLLQ8N9W6 283 aaKnown RBP8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 SPERTQ8NA61 448 aa8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 C19orf18Q8NEA5 215 aa8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 OR4M1Q8NGD0 313 aa8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 DIRAS2Q96HU8 199 aa8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 PSMG3-AS1Q96PY0 264 aa8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 TSC22D3Q99576 134 aa8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 SELENOIQ9C0D9 397 aa8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 ATG5Q9H1Y0 275 aa8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 WDR13Q9H1Z4 485 aa8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 CLEC4MQ9H2X3 399 aaPredicted RBP8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 LIME1Q9H400 295 aa8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 PLEKHF2Q9H8W4 249 aa8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 CBLN4Q9NTU7 201 aa8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 RHBDL2Q9NX52 303 aa8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 IL19Q9UHD0 177 aa8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 LYNX1G3V0Z9 82 aa8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 TRAPPC2LH3BP13 241 aa8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 LY6HO94772 140 aa8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 LYNX1P0DP58 116 aa8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 PTHLHP12272 177 aa8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 MGMTP16455 207 aa8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 EGR1P18146 543 aa8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 TNFSF4P23510 183 aa8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 DUSP1P28562 367 aa8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 CDKN1AP38936 164 aa8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 SRP9P49458 86 aaKnown RBP8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 VEGFCP49767 419 aa8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 SNRPD2P62316 118 aaKnown RBP8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 IL24Q13007 206 aa8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 PIGYQ3MUY2 71 aa8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 AGAP6Q5VW22 663 aa8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 CCDC190Q86UF4 302 aa8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 TMEM200AQ86VY9 491 aa8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 MKXQ8IYA7 352 aa8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 ZSCAN4Q8NAM6 433 aaPredicted RBP8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 PXT1Q8NFP0 134 aa8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 KCNG3Q8TAE7 436 aa8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 NRGNQ92686 78 aa8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 CPNE2Q96FN4 548 aaPredicted RBP8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 CEP19Q96LK0 163 aa8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 TRAF4Q9BUZ4 470 aaPredicted RBP8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 CACNG6Q9BXT2 260 aa8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 PKIBQ9C010 78 aa8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 TLNRD1Q9H1K6 362 aa8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 MS4A5Q9H3V2 200 aa8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 GCM1Q9NP62 436 aa8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 DECR2Q9NUI1 292 aa8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 EXTL2Q9UBQ6 330 aa8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 RAB22AQ9UL26 194 aa8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 ETV7Q9Y603 341 aa8.22□□□□□ -1.09
SNRNP40-201ENST00000263694 SOCS1O15524 211 aa8.21□□□□□ -1.1
SNRNP40-201ENST00000263694 NDUFS7O75251 213 aa8.21□□□□□ -1.1
SNRNP40-201ENST00000263694 PTBP3O95758 552 aaKnown RBP8.21□□□□□ -1.1
SNRNP40-201ENST00000263694 CYB5AP00167 134 aa8.21□□□□□ -1.1
SNRNP40-201ENST00000263694 CYB5R3P00387 301 aaPredicted RBP8.21□□□□□ -1.1
SNRNP40-201ENST00000263694 CSTBP04080 98 aaKnown RBP8.21□□□□□ -1.1
SNRNP40-201ENST00000263694 ADH4P08319 380 aa8.21□□□□□ -1.1
SNRNP40-201ENST00000263694 UBBP0CG47 229 aa8.21□□□□□ -1.1
SNRNP40-201ENST00000263694 PGA5P0DJD9 388 aa8.21□□□□□ -1.1
SNRNP40-201ENST00000263694 CDK2P24941 298 aa8.21□□□□□ -1.1
SNRNP40-201ENST00000263694 TLE4Q04727 773 aa8.21□□□□□ -1.1
SNRNP40-201ENST00000263694 MZT1Q08AG7 82 aa8.21□□□□□ -1.1
SNRNP40-201ENST00000263694 DYNC1I2Q13409 638 aaKnown RBP8.21□□□□□ -1.1
SNRNP40-201ENST00000263694 TAF9Q16594 264 aa8.21□□□□□ -1.1
SNRNP40-201ENST00000263694 DTX2Q86UW9 622 aa8.21□□□□□ -1.1
SNRNP40-201ENST00000263694 LRRC28Q86X40 367 aaPredicted RBP8.21□□□□□ -1.1
SNRNP40-201ENST00000263694 SAXO1Q8IYX7 474 aa8.21□□□□□ -1.1
SNRNP40-201ENST00000263694 MFSD4AQ8N468 514 aa8.21□□□□□ -1.1
SNRNP40-201ENST00000263694 OR51T1Q8NGJ9 327 aa8.21□□□□□ -1.1
SNRNP40-201ENST00000263694 LRRC29Q8WV35 223 aa8.21□□□□□ -1.1
SNRNP40-201ENST00000263694 TMEM59Q9BXS4 323 aa8.21□□□□□ -1.1
SNRNP40-201ENST00000263694 LPAR5Q9H1C0 372 aa8.21□□□□□ -1.1
SNRNP40-201ENST00000263694 ABCG5Q9H222 651 aa8.21□□□□□ -1.1
SNRNP40-201ENST00000263694 SAP30LQ9HAJ7 183 aa8.21□□□□□ -1.1
SNRNP40-201ENST00000263694 AKIP1Q9NQ31 210 aa8.21□□□□□ -1.1
SNRNP40-201ENST00000263694 FAIMQ9NVQ4 179 aa8.21□□□□□ -1.1
SNRNP40-201ENST00000263694 ELF5Q9UKW6 265 aaPredicted RBP8.21□□□□□ -1.1
SNRNP40-201ENST00000263694 PPP1R3CQ9UQK1 317 aa8.21□□□□□ -1.1
SNRNP40-201ENST00000263694 MRPS7Q9Y2R9 242 aaKnown RBP8.21□□□□□ -1.1
SNRNP40-201ENST00000263694 TACC2O95359 2948 aa8.21□□□□□ -1.1
SNRNP40-201ENST00000263694 PTPN13Q12923 2485 aa8.21□□□□□ -1.1
SNRNP40-201ENST00000263694 CELSR2Q9HCU4 2923 aa8.2□□□□□ -1.1
SNRNP40-201ENST00000263694 IGHV3OR15-7A0A075B7D8 119 aa8.2□□□□□ -1.1
SNRNP40-201ENST00000263694 NBPF19A0A087WUL8 3843 aa8.2□□□□□ -1.1
SNRNP40-201ENST00000263694 J3QRK9 145 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms