RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 RBBP9O75884 186 aa19.49■□□□□ 0.71
SMARCB1-201ENST00000263121 ECDO95905 644 aaPredicted RBP19.49■□□□□ 0.71
SMARCB1-201ENST00000263121 CYB5AP00167 134 aa19.49■□□□□ 0.71
SMARCB1-201ENST00000263121 BCL3P20749 454 aa19.49■□□□□ 0.71
SMARCB1-201ENST00000263121 GRNP28799 593 aaKnown RBP19.49■□□□□ 0.71
SMARCB1-201ENST00000263121 KLF3P57682 345 aaPredicted RBP19.49■□□□□ 0.71
SMARCB1-201ENST00000263121 SSBP1Q04837 148 aaKnown RBP19.49■□□□□ 0.71
SMARCB1-201ENST00000263121 VHLLQ6RSH7 139 aa19.49■□□□□ 0.71
SMARCB1-201ENST00000263121 CCBE1Q6UXH8 406 aaPredicted RBP19.49■□□□□ 0.71
SMARCB1-201ENST00000263121 OR13G1Q8NGZ3 307 aa19.49■□□□□ 0.71
SMARCB1-201ENST00000263121 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP19.49■□□□□ 0.71
SMARCB1-201ENST00000263121 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP19.48■□□□□ 0.71
SMARCB1-201ENST00000263121 GSTT2BP0CG30 244 aa19.48■□□□□ 0.71
SMARCB1-201ENST00000263121 FBXL14Q8N1E6 418 aa19.48■□□□□ 0.71
SMARCB1-201ENST00000263121 OR10AD1Q8NGE0 317 aa19.48■□□□□ 0.71
SMARCB1-201ENST00000263121 ARHGAP5-AS1Q96IT6 56 aa19.48■□□□□ 0.71
SMARCB1-201ENST00000263121 NEDD4LQ96PU5 975 aa19.48■□□□□ 0.71
SMARCB1-201ENST00000263121 C7orf50Q9BRJ6 194 aaKnown RBP19.48■□□□□ 0.71
SMARCB1-201ENST00000263121 MSL2Q9HCI7 577 aa19.48■□□□□ 0.71
SMARCB1-201ENST00000263121 NDRG3Q9UGV2 375 aa19.48■□□□□ 0.71
SMARCB1-201ENST00000263121 DUSP13Q9UII6 198 aa19.48■□□□□ 0.71
SMARCB1-201ENST00000263121 BLVRBP30043 206 aaPredicted RBP19.47■□□□□ 0.71
SMARCB1-201ENST00000263121 RBM11P57052 281 aaKnown RBP19.47■□□□□ 0.71
SMARCB1-201ENST00000263121 AP3S2P59780 193 aa19.47■□□□□ 0.71
SMARCB1-201ENST00000263121 TFF3Q07654 80 aa19.47■□□□□ 0.71
SMARCB1-201ENST00000263121 ZNF154Q13106 437 aa19.47■□□□□ 0.71
SMARCB1-201ENST00000263121 PIGYQ3MUY2 71 aa19.47■□□□□ 0.71
SMARCB1-201ENST00000263121 SPERTQ8NA61 448 aa19.47■□□□□ 0.71
SMARCB1-201ENST00000263121 POM121Q96HA1 1249 aa19.47■□□□□ 0.71
SMARCB1-201ENST00000263121 CXXC4Q9H2H0 198 aa19.47■□□□□ 0.71
SMARCB1-201ENST00000263121 KALRNO60229 2985 aa19.47■□□□□ 0.71
SMARCB1-201ENST00000263121 F8VVB4 439 aa19.46■□□□□ 0.71
SMARCB1-201ENST00000263121 F8VWA3 439 aa19.46■□□□□ 0.71
SMARCB1-201ENST00000263121 TRAPPC2LH3BP13 241 aa19.46■□□□□ 0.71
SMARCB1-201ENST00000263121 GABRR1P24046 479 aa19.46■□□□□ 0.71
SMARCB1-201ENST00000263121 KIR2DL3P43628 341 aa19.46■□□□□ 0.71
SMARCB1-201ENST00000263121 FGF12P61328 243 aa19.46■□□□□ 0.71
SMARCB1-201ENST00000263121 TAF9Q16594 264 aa19.46■□□□□ 0.71
SMARCB1-201ENST00000263121 PNLIPRP3Q17RR3 467 aa19.46■□□□□ 0.71
SMARCB1-201ENST00000263121 NCMAPQ5T1S8 102 aa19.46■□□□□ 0.71
SMARCB1-201ENST00000263121 SIGIRRQ6IA17 410 aa19.46■□□□□ 0.71
SMARCB1-201ENST00000263121 SLC22A25Q6T423 547 aa19.46■□□□□ 0.71
SMARCB1-201ENST00000263121 SCCPDHQ8NBX0 429 aa19.46■□□□□ 0.71
SMARCB1-201ENST00000263121 SYT3Q9BQG1 590 aa19.46■□□□□ 0.71
SMARCB1-201ENST00000263121 PECRQ9BY49 303 aa19.46■□□□□ 0.71
SMARCB1-201ENST00000263121 MRPL37Q9BZE1 423 aaKnown RBP19.46■□□□□ 0.71
SMARCB1-201ENST00000263121 ZNF442Q9H7R0 627 aa19.46■□□□□ 0.71
SMARCB1-201ENST00000263121 CA10Q9NS85 328 aa19.46■□□□□ 0.71
SMARCB1-201ENST00000263121 NKIRAS2Q9NYR9 191 aa19.46■□□□□ 0.71
SMARCB1-201ENST00000263121 ST3GAL6Q9Y274 331 aa19.46■□□□□ 0.71
SMARCB1-201ENST00000263121 MEIS3P1A6NDR6 274 aa19.46■□□□□ 0.71
SMARCB1-201ENST00000263121 BTCP35070 178 aa19.46■□□□□ 0.71
SMARCB1-201ENST00000263121 ACTBP60709 375 aa19.46■□□□□ 0.71
SMARCB1-201ENST00000263121 ACTG1P63261 375 aa19.46■□□□□ 0.71
SMARCB1-201ENST00000263121 SNTB1Q13884 538 aaKnown RBP19.46■□□□□ 0.71
SMARCB1-201ENST00000263121 ESPL1Q14674 2120 aa19.46■□□□□ 0.71
SMARCB1-201ENST00000263121 DAZAP2Q15038 168 aaPredicted RBP19.46■□□□□ 0.71
SMARCB1-201ENST00000263121 NHLRC3Q5JS37 347 aa19.46■□□□□ 0.71
SMARCB1-201ENST00000263121 OLFML2AQ68BL7 652 aa19.46■□□□□ 0.71
SMARCB1-201ENST00000263121 LINC01560Q8TB33 94 aa19.46■□□□□ 0.71
SMARCB1-201ENST00000263121 ST8SIA4Q92187 359 aa19.46■□□□□ 0.71
SMARCB1-201ENST00000263121 MRPL24Q96A35 216 aaKnown RBP19.46■□□□□ 0.71
SMARCB1-201ENST00000263121 CYYR1Q96J86 154 aa19.46■□□□□ 0.71
SMARCB1-201ENST00000263121 ESRP2Q9H6T0 727 aaKnown RBP19.46■□□□□ 0.71
SMARCB1-201ENST00000263121 TAS2R8Q9NYW2 309 aa19.46■□□□□ 0.71
SMARCB1-201ENST00000263121 CADP27708 2225 aa19.45■□□□□ 0.7
SMARCB1-201ENST00000263121 F5H5P2 479 aa19.45■□□□□ 0.7
SMARCB1-201ENST00000263121 GEMIN2O14893 280 aaKnown RBP19.45■□□□□ 0.7
SMARCB1-201ENST00000263121 SSX5O60225 188 aa19.45■□□□□ 0.7
SMARCB1-201ENST00000263121 RHBDL1O75783 438 aa19.45■□□□□ 0.7
SMARCB1-201ENST00000263121 MAB21L1Q13394 359 aa19.45■□□□□ 0.7
SMARCB1-201ENST00000263121 ARL6IP1Q15041 203 aa19.45■□□□□ 0.7
SMARCB1-201ENST00000263121 BATF2Q8N1L9 274 aa19.45■□□□□ 0.7
SMARCB1-201ENST00000263121 DUSP18Q8NEJ0 188 aa19.45■□□□□ 0.7
SMARCB1-201ENST00000263121 ENKURQ8TC29 256 aa19.45■□□□□ 0.7
SMARCB1-201ENST00000263121 NUDCD2Q8WVJ2 157 aa19.45■□□□□ 0.7
SMARCB1-201ENST00000263121 hCG_2014768A0A024R1R8 64 aa19.44■□□□□ 0.7
SMARCB1-201ENST00000263121 CENPXA8MT69 81 aa19.44■□□□□ 0.7
SMARCB1-201ENST00000263121 CSF1P09603 554 aa19.44■□□□□ 0.7
SMARCB1-201ENST00000263121 SLC6A1P30531 599 aa19.44■□□□□ 0.7
SMARCB1-201ENST00000263121 PCGF3Q3KNV8 242 aa19.44■□□□□ 0.7
SMARCB1-201ENST00000263121 TRAPPC6BQ86SZ2 158 aa19.44■□□□□ 0.7
SMARCB1-201ENST00000263121 DEDD2Q8WXF8 326 aa19.44■□□□□ 0.7
SMARCB1-201ENST00000263121 GTF3AQ92664 365 aaKnown RBP19.44■□□□□ 0.7
SMARCB1-201ENST00000263121 HS3ST6Q96QI5 342 aa19.44■□□□□ 0.7
SMARCB1-201ENST00000263121 TLNRD1Q9H1K6 362 aa19.44■□□□□ 0.7
SMARCB1-201ENST00000263121 RHOFQ9HBH0 211 aa19.44■□□□□ 0.7
SMARCB1-201ENST00000263121 HRASLSQ9HDD0 168 aa19.44■□□□□ 0.7
SMARCB1-201ENST00000263121 ZNF581Q9P0T4 197 aa19.44■□□□□ 0.7
SMARCB1-201ENST00000263121 HSF4Q9ULV5 492 aa19.44■□□□□ 0.7
SMARCB1-201ENST00000263121 POLDIP2Q9Y2S7 368 aa19.44■□□□□ 0.7
SMARCB1-201ENST00000263121 IGSF10Q6WRI0 2623 aa19.44■□□□□ 0.7
SMARCB1-201ENST00000263121 FAM90A10PA6NDY2 464 aa19.43■□□□□ 0.7
SMARCB1-201ENST00000263121 FAM90A18PA6NE21 464 aa19.43■□□□□ 0.7
SMARCB1-201ENST00000263121 FAM90A16PA6NEW6 464 aa19.43■□□□□ 0.7
SMARCB1-201ENST00000263121 FAM90A20PA6NIJ5 464 aa19.43■□□□□ 0.7
SMARCB1-201ENST00000263121 ZSCAN5BA6NJL1 495 aa19.43■□□□□ 0.7
SMARCB1-201ENST00000263121 FAM90A8PA6NJQ4 464 aa19.43■□□□□ 0.7
SMARCB1-201ENST00000263121 FAM90A7PA6NKC0 464 aa19.43■□□□□ 0.7
SMARCB1-201ENST00000263121 FAM90A22PA8MWA6 464 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms