RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 TNFAIP8L1Q8WVP5 186 aa13.93□□□□□ -0.18
CHCHD3-201ENST00000262570 SLAMF9Q96A28 289 aa13.93□□□□□ -0.18
CHCHD3-201ENST00000262570 SEH1LQ96EE3 360 aa13.93□□□□□ -0.18
CHCHD3-201ENST00000262570 CEP19Q96LK0 163 aa13.93□□□□□ -0.18
CHCHD3-201ENST00000262570 GFI1Q99684 422 aa13.93□□□□□ -0.18
CHCHD3-201ENST00000262570 CENPOQ9BU64 300 aa13.93□□□□□ -0.18
CHCHD3-201ENST00000262570 REG4Q9BYZ8 158 aa13.93□□□□□ -0.18
CHCHD3-201ENST00000262570 CNTD2Q9H8S5 307 aa13.93□□□□□ -0.18
CHCHD3-201ENST00000262570 HES4Q9HCC6 221 aa13.93□□□□□ -0.18
CHCHD3-201ENST00000262570 RASL12Q9NYN1 266 aa13.93□□□□□ -0.18
CHCHD3-201ENST00000262570 IGHV4-61A0A0C4DH41 118 aa13.92□□□□□ -0.18
CHCHD3-201ENST00000262570 F8VVB4 439 aa13.92□□□□□ -0.18
CHCHD3-201ENST00000262570 F8VWA3 439 aa13.92□□□□□ -0.18
CHCHD3-201ENST00000262570 MUC1P15941 1255 aaPredicted RBP13.92□□□□□ -0.18
CHCHD3-201ENST00000262570 OR3A4PP47883 348 aa13.92□□□□□ -0.18
CHCHD3-201ENST00000262570 GMFBP60983 142 aa13.92□□□□□ -0.18
CHCHD3-201ENST00000262570 MICBQ29980 383 aa13.92□□□□□ -0.18
CHCHD3-201ENST00000262570 ZNF404Q494X3 552 aa13.92□□□□□ -0.18
CHCHD3-201ENST00000262570 TMEM155Q4W5P6 130 aa13.92□□□□□ -0.18
CHCHD3-201ENST00000262570 GLT8D1Q68CQ7 371 aa13.92□□□□□ -0.18
CHCHD3-201ENST00000262570 ASCL4Q6XD76 172 aa13.92□□□□□ -0.18
CHCHD3-201ENST00000262570 SPNS3Q6ZMD2 512 aa13.92□□□□□ -0.18
CHCHD3-201ENST00000262570 FAM90A1Q86YD7 464 aa13.92□□□□□ -0.18
CHCHD3-201ENST00000262570 PNLDC1Q8NA58 520 aaKnown RBP13.92□□□□□ -0.18
CHCHD3-201ENST00000262570 DEFB108BQ8NET1 73 aa13.92□□□□□ -0.18
CHCHD3-201ENST00000262570 FOXRED1Q96CU9 486 aaPredicted RBP13.92□□□□□ -0.18
CHCHD3-201ENST00000262570 KCTD7Q96MP8 289 aa13.92□□□□□ -0.18
CHCHD3-201ENST00000262570 UQCC2Q9BRT2 126 aa13.92□□□□□ -0.18
CHCHD3-201ENST00000262570 RNF167Q9H6Y7 350 aa13.92□□□□□ -0.18
CHCHD3-201ENST00000262570 AK6Q9Y3D8 172 aaKnown RBP13.92□□□□□ -0.18
CHCHD3-201ENST00000262570 MAST4O15021 2626 aa13.92□□□□□ -0.18
CHCHD3-201ENST00000262570 TRAV38-1A0A0B4J264 116 aa13.92□□□□□ -0.18
CHCHD3-201ENST00000262570 ISPDA4D126 451 aa13.92□□□□□ -0.18
CHCHD3-201ENST00000262570 RNF223E7ERA6 249 aa13.92□□□□□ -0.18
CHCHD3-201ENST00000262570 TRAPPC2LH3BP13 241 aa13.92□□□□□ -0.18
CHCHD3-201ENST00000262570 KDM4BO94953 1096 aa13.92□□□□□ -0.18
CHCHD3-201ENST00000262570 USF1P22415 310 aaPredicted RBP13.92□□□□□ -0.18
CHCHD3-201ENST00000262570 MYL9P24844 172 aa13.92□□□□□ -0.18
CHCHD3-201ENST00000262570 NPBWR2P48146 333 aa13.92□□□□□ -0.18
CHCHD3-201ENST00000262570 C1orf100Q5SVJ3 147 aa13.92□□□□□ -0.18
CHCHD3-201ENST00000262570 ACP7Q6ZNF0 438 aa13.92□□□□□ -0.18
CHCHD3-201ENST00000262570 ANKRD13BQ86YJ7 626 aa13.92□□□□□ -0.18
CHCHD3-201ENST00000262570 Q8IYB0 196 aa13.92□□□□□ -0.18
CHCHD3-201ENST00000262570 BATF2Q8N1L9 274 aa13.92□□□□□ -0.18
CHCHD3-201ENST00000262570 MUC20Q8N307 709 aaPredicted RBP13.92□□□□□ -0.18
CHCHD3-201ENST00000262570 C12orf43Q96C57 262 aaKnown RBP13.92□□□□□ -0.18
CHCHD3-201ENST00000262570 TMEM246Q9BRR3 403 aa13.92□□□□□ -0.18
CHCHD3-201ENST00000262570 SMURF1Q9HCE7 757 aa13.92□□□□□ -0.18
CHCHD3-201ENST00000262570 CELSR1Q9NYQ6 3014 aa13.91□□□□□ -0.18
CHCHD3-201ENST00000262570 IGHV3OR15-7A0A075B7D8 119 aa13.91□□□□□ -0.18
CHCHD3-201ENST00000262570 TNFRSF13BO14836 293 aaPredicted RBP13.91□□□□□ -0.18
CHCHD3-201ENST00000262570 NXPH2O95156 264 aa13.91□□□□□ -0.18
CHCHD3-201ENST00000262570 SFTPBP07988 381 aa13.91□□□□□ -0.18
CHCHD3-201ENST00000262570 BCL3P20749 454 aa13.91□□□□□ -0.18
CHCHD3-201ENST00000262570 MTNR1BP49286 362 aa13.91□□□□□ -0.18
CHCHD3-201ENST00000262570 PSMD7P51665 324 aa13.91□□□□□ -0.18
CHCHD3-201ENST00000262570 OR4D6Q8NGJ1 314 aa13.91□□□□□ -0.18
CHCHD3-201ENST00000262570 FAM192AQ9GZU8 254 aa13.91□□□□□ -0.18
CHCHD3-201ENST00000262570 NARFLQ9H6Q4 476 aa13.91□□□□□ -0.18
CHCHD3-201ENST00000262570 RHOFQ9HBH0 211 aa13.91□□□□□ -0.18
CHCHD3-201ENST00000262570 RBFOX1Q9NWB1 397 aaKnown RBP13.91□□□□□ -0.18
CHCHD3-201ENST00000262570 NLKQ9UBE8 527 aa13.91□□□□□ -0.18
CHCHD3-201ENST00000262570 DNAJB11Q9UBS4 358 aa13.91□□□□□ -0.18
CHCHD3-201ENST00000262570 PDCD5O14737 125 aa13.9□□□□□ -0.18
CHCHD3-201ENST00000262570 CDRT1O95170 752 aa13.9□□□□□ -0.18
CHCHD3-201ENST00000262570 LOXL1Q08397 574 aaPredicted RBP13.9□□□□□ -0.18
CHCHD3-201ENST00000262570 KCNJ8Q15842 424 aa13.9□□□□□ -0.18
CHCHD3-201ENST00000262570 SMIM21Q3B7S5 101 aa13.9□□□□□ -0.18
CHCHD3-201ENST00000262570 GPR107Q5VW38 600 aa13.9□□□□□ -0.18
CHCHD3-201ENST00000262570 SLC16A12Q6ZSM3 486 aa13.9□□□□□ -0.18
CHCHD3-201ENST00000262570 TPRA1Q86W33 373 aa13.9□□□□□ -0.18
CHCHD3-201ENST00000262570 SPICQ8N5J4 248 aa13.9□□□□□ -0.18
CHCHD3-201ENST00000262570 Q8NFD4 153 aa13.9□□□□□ -0.18
CHCHD3-201ENST00000262570 CLDND2Q8NHS1 167 aa13.9□□□□□ -0.18
CHCHD3-201ENST00000262570 GAL3ST1Q99999 423 aa13.9□□□□□ -0.18
CHCHD3-201ENST00000262570 NAA50Q9GZZ1 169 aaKnown RBP13.9□□□□□ -0.18
CHCHD3-201ENST00000262570 V9GY05 133 aa13.9□□□□□ -0.18
CHCHD3-201ENST00000262570 OR2AT4A6NND4 320 aa13.89□□□□□ -0.19
CHCHD3-201ENST00000262570 CEACAM18A8MTB9 384 aa13.89□□□□□ -0.19
CHCHD3-201ENST00000262570 NDUFA2O43678 99 aa13.89□□□□□ -0.19
CHCHD3-201ENST00000262570 RAB3BP20337 219 aa13.89□□□□□ -0.19
CHCHD3-201ENST00000262570 SDC2P34741 201 aa13.89□□□□□ -0.19
CHCHD3-201ENST00000262570 LMO4P61968 165 aa13.89□□□□□ -0.19
CHCHD3-201ENST00000262570 LSM3P62310 102 aaKnown RBP13.89□□□□□ -0.19
CHCHD3-201ENST00000262570 STUMQ69YW2 141 aa13.89□□□□□ -0.19
CHCHD3-201ENST00000262570 ELP2Q6IA86 826 aa13.89□□□□□ -0.19
CHCHD3-201ENST00000262570 FAM166AQ6J272 317 aa13.89□□□□□ -0.19
CHCHD3-201ENST00000262570 DCDC5Q6ZRR9 648 aa13.89□□□□□ -0.19
CHCHD3-201ENST00000262570 NR2C2APQ86WQ0 139 aa13.89□□□□□ -0.19
CHCHD3-201ENST00000262570 FAM58AQ8N1B3 248 aa13.89□□□□□ -0.19
CHCHD3-201ENST00000262570 OR5T2Q8NGG2 359 aa13.89□□□□□ -0.19
CHCHD3-201ENST00000262570 ANGPTL6Q8NI99 470 aa13.89□□□□□ -0.19
CHCHD3-201ENST00000262570 S100A13Q99584 98 aa13.89□□□□□ -0.19
CHCHD3-201ENST00000262570 METTL9Q9H1A3 318 aa13.89□□□□□ -0.19
CHCHD3-201ENST00000262570 IL36GQ9NZH8 169 aa13.89□□□□□ -0.19
CHCHD3-201ENST00000262570 ING4Q9UNL4 249 aa13.89□□□□□ -0.19
CHCHD3-201ENST00000262570 MRPS28Q9Y2Q9 187 aaKnown RBP13.89□□□□□ -0.19
CHCHD3-201ENST00000262570 FLNAP21333 2647 aaKnown RBP13.88□□□□□ -0.19
CHCHD3-201ENST00000262570 SLC17A2O00624 439 aa13.88□□□□□ -0.19
CHCHD3-201ENST00000262570 SLC22A1O15245 554 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms