RNA–Protein interactions for RNA: ENST00000262327.9

LIG3-201, Transcript of DNA ligase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIG3, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-201ENST00000262327 OR14K1Q8NGZ2 314 aa8.8□□□□□ -1
LIG3-201ENST00000262327 SECTM1Q8WVN6 248 aa8.8□□□□□ -1
LIG3-201ENST00000262327 SLC39A7Q92504 469 aa8.8□□□□□ -1
LIG3-201ENST00000262327 UCN2Q96RP3 112 aa8.8□□□□□ -1
LIG3-201ENST00000262327 S100A13Q99584 98 aa8.8□□□□□ -1
LIG3-201ENST00000262327 GPR173Q9NS66 373 aa8.8□□□□□ -1
LIG3-201ENST00000262327 TREM2Q9NZC2 230 aa8.8□□□□□ -1
LIG3-201ENST00000262327 OSGIN2Q9Y236 505 aa8.8□□□□□ -1
LIG3-201ENST00000262327 PIGLQ9Y2B2 252 aa8.8□□□□□ -1
LIG3-201ENST00000262327 NME2P1O60361 137 aa8.79□□□□□ -1
LIG3-201ENST00000262327 C1QL1O75973 258 aa8.79□□□□□ -1
LIG3-201ENST00000262327 PATE4P0C8F1 98 aa8.79□□□□□ -1
LIG3-201ENST00000262327 HKR1P10072 659 aa8.79□□□□□ -1
LIG3-201ENST00000262327 EDN3P14138 238 aa8.79□□□□□ -1
LIG3-201ENST00000262327 ZNF708P17019 499 aa8.79□□□□□ -1
LIG3-201ENST00000262327 TBPP20226 339 aa8.79□□□□□ -1
LIG3-201ENST00000262327 NOVA1P51513 510 aaKnown RBP8.79□□□□□ -1
LIG3-201ENST00000262327 FABP9Q0Z7S8 132 aa8.79□□□□□ -1
LIG3-201ENST00000262327 SLC25A47Q6Q0C1 308 aa8.79□□□□□ -1
LIG3-201ENST00000262327 Q6ZRG5 221 aa8.79□□□□□ -1
LIG3-201ENST00000262327 MISPQ8IVT2 679 aa8.79□□□□□ -1
LIG3-201ENST00000262327 ADAMTS17Q8TE56 1095 aa8.79□□□□□ -1
LIG3-201ENST00000262327 ISOC2Q96AB3 205 aa8.79□□□□□ -1
LIG3-201ENST00000262327 ZNF385AQ96PM9 386 aaKnown RBP8.79□□□□□ -1
LIG3-201ENST00000262327 OCSTAMPQ9BR26 566 aa8.79□□□□□ -1
LIG3-201ENST00000262327 TCEAL7Q9BRU2 100 aa8.79□□□□□ -1
LIG3-201ENST00000262327 FAAP24Q9BTP7 215 aa8.79□□□□□ -1
LIG3-201ENST00000262327 LIME1Q9H400 295 aa8.79□□□□□ -1
LIG3-201ENST00000262327 PLEKHJ1Q9NW61 149 aa8.79□□□□□ -1
LIG3-201ENST00000262327 RCC2Q9P258 522 aaKnown RBP8.79□□□□□ -1
LIG3-201ENST00000262327 FBXL17Q9UF56 701 aa8.79□□□□□ -1
LIG3-201ENST00000262327 RPL12P30050 165 aaKnown RBP8.79□□□□□ -1
LIG3-201ENST00000262327 FCGR2CP31995 323 aa8.79□□□□□ -1
LIG3-201ENST00000262327 RBMXP38159 391 aaKnown RBP8.79□□□□□ -1
LIG3-201ENST00000262327 F2RL1P55085 397 aa8.79□□□□□ -1
LIG3-201ENST00000262327 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.79□□□□□ -1
LIG3-201ENST00000262327 ERGIC1Q969X5 290 aa8.79□□□□□ -1
LIG3-201ENST00000262327 GNRHR2Q96P88 292 aa8.79□□□□□ -1
LIG3-201ENST00000262327 NEU1Q99519 415 aa8.79□□□□□ -1
LIG3-201ENST00000262327 SULT4A1Q9BR01 284 aa8.79□□□□□ -1
LIG3-201ENST00000262327 ZFP57Q9NU63 452 aa8.79□□□□□ -1
LIG3-201ENST00000262327 C14orf166Q9Y224 244 aaKnown RBP8.79□□□□□ -1
LIG3-201ENST00000262327 WIF1Q9Y5W5 379 aa8.79□□□□□ -1
LIG3-201ENST00000262327 FAM230AA0A1W2PPH8 454 aa8.79□□□□□ -1
LIG3-201ENST00000262327 SLC33A1O00400 549 aaPredicted RBP8.79□□□□□ -1
LIG3-201ENST00000262327 SCRG1O75711 98 aa8.79□□□□□ -1
LIG3-201ENST00000262327 SCGNO76038 276 aa8.79□□□□□ -1
LIG3-201ENST00000262327 TMEM225BP0DP42 221 aa8.79□□□□□ -1
LIG3-201ENST00000262327 PHLDA2Q53GA4 152 aa8.79□□□□□ -1
LIG3-201ENST00000262327 GUSBP11Q6P575 273 aa8.79□□□□□ -1
LIG3-201ENST00000262327 DHRS11Q6UWP2 260 aa8.79□□□□□ -1
LIG3-201ENST00000262327 DOK3Q7L591 496 aa8.79□□□□□ -1
LIG3-201ENST00000262327 C5orf24Q7Z6I8 188 aa8.79□□□□□ -1
LIG3-201ENST00000262327 DPPA2Q7Z7J5 298 aa8.79□□□□□ -1
LIG3-201ENST00000262327 LHFPL1Q86WI0 220 aa8.79□□□□□ -1
LIG3-201ENST00000262327 AQP10Q96PS8 301 aa8.79□□□□□ -1
LIG3-201ENST00000262327 CLCC1Q96S66 551 aa8.79□□□□□ -1
LIG3-201ENST00000262327 MYOTQ9UBF9 498 aa8.79□□□□□ -1
LIG3-201ENST00000262327 CARHSP1Q9Y2V2 147 aaKnown RBP8.79□□□□□ -1
LIG3-201ENST00000262327 AMDHD2Q9Y303 409 aa8.79□□□□□ -1
LIG3-201ENST00000262327 RFNGQ9Y644 331 aa8.79□□□□□ -1
LIG3-201ENST00000262327 CACNA1EQ15878 2313 aa8.78□□□□□ -1
LIG3-201ENST00000262327 ADAMTS9Q9P2N4 1935 aa8.78□□□□□ -1
LIG3-201ENST00000262327 K7EPK0 472 aa8.78□□□□□ -1
LIG3-201ENST00000262327 MSTNO14793 375 aa8.78□□□□□ -1
LIG3-201ENST00000262327 CAV2P51636 162 aa8.78□□□□□ -1
LIG3-201ENST00000262327 TMEM33P57088 247 aa8.78□□□□□ -1
LIG3-201ENST00000262327 NAAAQ02083 359 aa8.78□□□□□ -1
LIG3-201ENST00000262327 ZNF616Q08AN1 781 aa8.78□□□□□ -1
LIG3-201ENST00000262327 PEA15Q15121 130 aa8.78□□□□□ -1
LIG3-201ENST00000262327 SNAI3Q3KNW1 292 aa8.78□□□□□ -1
LIG3-201ENST00000262327 PLA2G2CQ5R387 149 aa8.78□□□□□ -1
LIG3-201ENST00000262327 PEG10Q86TG7 708 aaKnown RBP8.78□□□□□ -1
LIG3-201ENST00000262327 FAM71E2Q8N5Q1 922 aa8.78□□□□□ -1
LIG3-201ENST00000262327 C14orf79Q96F83 325 aa8.78□□□□□ -1
LIG3-201ENST00000262327 MRGPRX4Q96LA9 322 aa8.78□□□□□ -1
LIG3-201ENST00000262327 SEC11CQ9BY50 192 aa8.78□□□□□ -1
LIG3-201ENST00000262327 ARRDC1-AS1Q9H2J1 176 aa8.78□□□□□ -1
LIG3-201ENST00000262327 NXT1Q9UKK6 140 aaKnown RBP8.78□□□□□ -1
LIG3-201ENST00000262327 KMT2EQ8IZD2 1858 aa8.78□□□□□ -1
LIG3-201ENST00000262327 A0A1W2PPE3 182 aa8.78□□□□□ -1
LIG3-201ENST00000262327 IFNA2P01563 188 aa8.78□□□□□ -1
LIG3-201ENST00000262327 SNRNP70P08621 437 aaKnown RBP8.78□□□□□ -1
LIG3-201ENST00000262327 GUCA1AP43080 201 aaPredicted RBP8.78□□□□□ -1
LIG3-201ENST00000262327 DCDP81605 110 aaKnown RBP8.78□□□□□ -1
LIG3-201ENST00000262327 GGNBP1Q5YKI7 109 aa8.78□□□□□ -1
LIG3-201ENST00000262327 SULF2Q8IWU5 870 aa8.78□□□□□ -1
LIG3-201ENST00000262327 RPS10P5Q9NQ39 176 aa8.78□□□□□ -1
LIG3-201ENST00000262327 PLEK2Q9NYT0 353 aa8.78□□□□□ -1
LIG3-201ENST00000262327 B3GALT1Q9Y5Z6 326 aa8.78□□□□□ -1
LIG3-201ENST00000262327 A0A1W2PNV4 684 aa8.77□□□□□ -1
LIG3-201ENST00000262327 TCAPO15273 167 aa8.77□□□□□ -1
LIG3-201ENST00000262327 GSK3AP49840 483 aa8.77□□□□□ -1
LIG3-201ENST00000262327 PNLIPRP3Q17RR3 467 aa8.77□□□□□ -1
LIG3-201ENST00000262327 RHBDD2Q6NTF9 364 aa8.77□□□□□ -1
LIG3-201ENST00000262327 OR2M3Q8NG83 312 aa8.77□□□□□ -1
LIG3-201ENST00000262327 FNDC9Q8TBE3 224 aa8.77□□□□□ -1
LIG3-201ENST00000262327 CPNE4Q96A23 557 aaPredicted RBP8.77□□□□□ -1
LIG3-201ENST00000262327 PIGQQ9BRB3 760 aa8.77□□□□□ -1
LIG3-201ENST00000262327 WNT5BQ9H1J7 359 aa8.77□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms