RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 ASCL5Q7RTU5 278 aa7.74□□□□□ -1.17
PTCD3-201ENST00000254630 OR8B12Q8NGG6 310 aa7.74□□□□□ -1.17
PTCD3-201ENST00000254630 TMEFF2Q9UIK5 374 aaPredicted RBP7.74□□□□□ -1.17
PTCD3-201ENST00000254630 SFT2D2O95562 160 aa7.73□□□□□ -1.17
PTCD3-201ENST00000254630 C21orf58P58505 322 aa7.73□□□□□ -1.17
PTCD3-201ENST00000254630 FAM162BQ5T6X4 162 aa7.73□□□□□ -1.17
PTCD3-201ENST00000254630 TUSC5Q8IXB3 177 aa7.73□□□□□ -1.17
PTCD3-201ENST00000254630 SIGLECL1Q8N7X8 197 aa7.73□□□□□ -1.17
PTCD3-201ENST00000254630 UBALD1Q8TB05 177 aa7.73□□□□□ -1.17
PTCD3-201ENST00000254630 EID2BQ96D98 161 aa7.73□□□□□ -1.17
PTCD3-201ENST00000254630 TREM2Q9NZC2 230 aa7.73□□□□□ -1.17
PTCD3-201ENST00000254630 PNLIPP16233 465 aa7.73□□□□□ -1.17
PTCD3-201ENST00000254630 C11orf87Q6NUJ2 197 aa7.73□□□□□ -1.17
PTCD3-201ENST00000254630 C6orf201Q7Z4U5 140 aa7.73□□□□□ -1.17
PTCD3-201ENST00000254630 MYPOPQ86VE0 399 aaPredicted RBP7.73□□□□□ -1.17
PTCD3-201ENST00000254630 OR2M7Q8NG81 312 aa7.73□□□□□ -1.17
PTCD3-201ENST00000254630 PPP1R1CQ8WVI7 109 aa7.73□□□□□ -1.17
PTCD3-201ENST00000254630 SMIM7Q9BQ49 75 aa7.73□□□□□ -1.17
PTCD3-201ENST00000254630 SF3B5Q9BWJ5 86 aaKnown RBP7.73□□□□□ -1.17
PTCD3-201ENST00000254630 CNTD2Q9H8S5 307 aa7.73□□□□□ -1.17
PTCD3-201ENST00000254630 ZNF275Q9NSD4 429 aaPredicted RBP7.73□□□□□ -1.17
PTCD3-201ENST00000254630 MYO18AQ92614 2054 aaKnown RBP7.73□□□□□ -1.17
PTCD3-201ENST00000254630 DNASE2O00115 360 aaPredicted RBP7.73□□□□□ -1.17
PTCD3-201ENST00000254630 PDZD11Q5EBL8 140 aa7.73□□□□□ -1.17
PTCD3-201ENST00000254630 MRGPRDQ8TDS7 321 aa7.73□□□□□ -1.17
PTCD3-201ENST00000254630 ZNF638Q14966 1978 aaKnown RBP7.73□□□□□ -1.17
PTCD3-201ENST00000254630 TRAV38-1A0A0B4J264 116 aa7.73□□□□□ -1.17
PTCD3-201ENST00000254630 C3orf80F5H4A9 247 aa7.73□□□□□ -1.17
PTCD3-201ENST00000254630 HOXC8P31273 242 aa7.73□□□□□ -1.17
PTCD3-201ENST00000254630 CEACAM3P40198 252 aa7.73□□□□□ -1.17
PTCD3-201ENST00000254630 OXA1LQ15070 435 aa7.73□□□□□ -1.17
PTCD3-201ENST00000254630 RASL10BQ96S79 203 aa7.73□□□□□ -1.17
PTCD3-201ENST00000254630 ICAM5Q9UMF0 924 aa7.73□□□□□ -1.17
PTCD3-201ENST00000254630 OOEPA6NGQ2 149 aa7.73□□□□□ -1.17
PTCD3-201ENST00000254630 LIPT2A6NK58 231 aa7.73□□□□□ -1.17
PTCD3-201ENST00000254630 ATP6V1G2-DDX39BF2Z307 99 aa7.73□□□□□ -1.17
PTCD3-201ENST00000254630 CTAG2O75638 210 aa7.73□□□□□ -1.17
PTCD3-201ENST00000254630 OR2J3O76001 311 aa7.73□□□□□ -1.17
PTCD3-201ENST00000254630 IL5P05113 134 aa7.73□□□□□ -1.17
PTCD3-201ENST00000254630 CCL4P13236 92 aa7.73□□□□□ -1.17
PTCD3-201ENST00000254630 CRYBB2P43320 205 aa7.73□□□□□ -1.17
PTCD3-201ENST00000254630 PDZK1IP1Q13113 114 aa7.73□□□□□ -1.17
PTCD3-201ENST00000254630 CD300LDQ6UXZ3 194 aa7.73□□□□□ -1.17
PTCD3-201ENST00000254630 SSX7Q7RTT5 188 aa7.73□□□□□ -1.17
PTCD3-201ENST00000254630 NRTNQ99748 197 aa7.73□□□□□ -1.17
PTCD3-201ENST00000254630 ERRFI1Q9UJM3 462 aaPredicted RBP7.73□□□□□ -1.17
PTCD3-201ENST00000254630 FXYD1O00168 92 aa7.72□□□□□ -1.17
PTCD3-201ENST00000254630 SLC25A5P05141 298 aaKnown RBP7.72□□□□□ -1.17
PTCD3-201ENST00000254630 SP1P08047 785 aa7.72□□□□□ -1.17
PTCD3-201ENST00000254630 GALP22466 123 aa7.72□□□□□ -1.17
PTCD3-201ENST00000254630 CD80P33681 288 aa7.72□□□□□ -1.17
PTCD3-201ENST00000254630 ENDOGQ14249 297 aaKnown RBP7.72□□□□□ -1.17
PTCD3-201ENST00000254630 ARRDC1Q8N5I2 433 aa7.72□□□□□ -1.17
PTCD3-201ENST00000254630 GRAMD2BQ96HH9 432 aa7.72□□□□□ -1.17
PTCD3-201ENST00000254630 OR5V1Q9UGF6 321 aa7.72□□□□□ -1.17
PTCD3-201ENST00000254630 PDGFBP01127 241 aaPredicted RBP7.72□□□□□ -1.17
PTCD3-201ENST00000254630 FBP1P09467 338 aa7.72□□□□□ -1.17
PTCD3-201ENST00000254630 MESTQ5EB52 335 aa7.72□□□□□ -1.17
PTCD3-201ENST00000254630 C1orf185Q5T7R7 199 aa7.72□□□□□ -1.17
PTCD3-201ENST00000254630 FOXB2Q5VYV0 432 aa7.72□□□□□ -1.17
PTCD3-201ENST00000254630 RAB1CQ92928 201 aa7.72□□□□□ -1.17
PTCD3-201ENST00000254630 MOGAT1Q96PD6 335 aa7.72□□□□□ -1.17
PTCD3-201ENST00000254630 WDR61Q9GZS3 305 aaKnown RBP7.72□□□□□ -1.17
PTCD3-201ENST00000254630 FLRT3Q9NZU0 649 aa7.72□□□□□ -1.17
PTCD3-201ENST00000254630 TOX4O94842 621 aa7.72□□□□□ -1.17
PTCD3-201ENST00000254630 HAND1O96004 215 aa7.72□□□□□ -1.17
PTCD3-201ENST00000254630 ERVFC1-1P60608 527 aa7.72□□□□□ -1.17
PTCD3-201ENST00000254630 SLC38A11Q08AI6 406 aa7.72□□□□□ -1.17
PTCD3-201ENST00000254630 INSL4Q14641 139 aa7.72□□□□□ -1.17
PTCD3-201ENST00000254630 RTP5Q14D33 572 aa7.72□□□□□ -1.17
PTCD3-201ENST00000254630 ZNF788Q6ZQV5 615 aa7.72□□□□□ -1.17
PTCD3-201ENST00000254630 MSRB3Q8IXL7 192 aa7.72□□□□□ -1.17
PTCD3-201ENST00000254630 SPAARA0A1B0GVQ0 90 aa7.72□□□□□ -1.17
PTCD3-201ENST00000254630 OR5B21A6NL26 309 aa7.72□□□□□ -1.17
PTCD3-201ENST00000254630 MS4A18H0YCH9 400 aa7.72□□□□□ -1.17
PTCD3-201ENST00000254630 KRASP01116 189 aa7.72□□□□□ -1.17
PTCD3-201ENST00000254630 PATE4P0C8F1 98 aa7.72□□□□□ -1.17
PTCD3-201ENST00000254630 NTF3P20783 257 aa7.72□□□□□ -1.17
PTCD3-201ENST00000254630 PEBP1P30086 187 aaKnown RBP7.72□□□□□ -1.17
PTCD3-201ENST00000254630 KIR2DL1P43626 348 aaPredicted RBP7.72□□□□□ -1.17
PTCD3-201ENST00000254630 MS4A18Q3C1V0 323 aa7.72□□□□□ -1.17
PTCD3-201ENST00000254630 TIPARPQ7Z3E1 657 aaKnown RBP7.72□□□□□ -1.17
PTCD3-201ENST00000254630 NHLRC2Q8NBF2 726 aa7.72□□□□□ -1.17
PTCD3-201ENST00000254630 SP7Q8TDD2 431 aaPredicted RBP7.72□□□□□ -1.17
PTCD3-201ENST00000254630 NAA60Q9H7X0 242 aa7.72□□□□□ -1.17
PTCD3-201ENST00000254630 RAB18Q9NP72 206 aa7.72□□□□□ -1.17
PTCD3-201ENST00000254630 COA4Q9NYJ1 87 aa7.72□□□□□ -1.17
PTCD3-201ENST00000254630 OR6C3Q9NZP0 311 aa7.72□□□□□ -1.17
PTCD3-201ENST00000254630 MBD1Q9UIS9 605 aaPredicted RBP7.72□□□□□ -1.17
PTCD3-201ENST00000254630 TRIP11Q15643 1979 aa7.72□□□□□ -1.17
PTCD3-201ENST00000254630 RAB5AP20339 215 aa7.72□□□□□ -1.17
PTCD3-201ENST00000254630 ZNF425Q6IV72 752 aa7.72□□□□□ -1.17
PTCD3-201ENST00000254630 RELL2Q8NC24 303 aaPredicted RBP7.72□□□□□ -1.17
PTCD3-201ENST00000254630 C2CD4CQ8TF44 421 aa7.72□□□□□ -1.17
PTCD3-201ENST00000254630 MPC1Q9Y5U8 109 aa7.72□□□□□ -1.17
PTCD3-201ENST00000254630 KCNMB2Q9Y691 235 aa7.72□□□□□ -1.17
PTCD3-201ENST00000254630 C9orf170A2RU37 121 aa7.71□□□□□ -1.17
PTCD3-201ENST00000254630 H3BP45 60 aa7.71□□□□□ -1.17
PTCD3-201ENST00000254630 PNPP00491 289 aa7.71□□□□□ -1.17
PTCD3-201ENST00000254630 WNT1P04628 370 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms