RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 AKR7LQ8NHP1 331 aa16.56■□□□□ 0.24
SNX4-201ENST00000251775 CD300LFQ8TDQ1 290 aa16.56■□□□□ 0.24
SNX4-201ENST00000251775 C19orf25Q9UFG5 118 aaPredicted RBP16.56■□□□□ 0.24
SNX4-201ENST00000251775 TNRC6BQ9UPQ9 1833 aaKnown RBP16.56■□□□□ 0.24
SNX4-201ENST00000251775 IGHG1P01857 330 aa16.56■□□□□ 0.24
SNX4-201ENST00000251775 SEC11BP0C7V7 166 aa16.56■□□□□ 0.24
SNX4-201ENST00000251775 HOXA5P20719 270 aa16.56■□□□□ 0.24
SNX4-201ENST00000251775 ANOS1P23352 680 aa16.56■□□□□ 0.24
SNX4-201ENST00000251775 RPS23P62266 143 aaKnown RBP16.56■□□□□ 0.24
SNX4-201ENST00000251775 SURF2Q15527 256 aaPredicted RBP16.56■□□□□ 0.24
SNX4-201ENST00000251775 HLA-BQ31612 363 aa16.56■□□□□ 0.24
SNX4-201ENST00000251775 PYY3Q5JQD4 70 aa16.56■□□□□ 0.24
SNX4-201ENST00000251775 PRAMEF20Q5VT98 475 aa16.56■□□□□ 0.24
SNX4-201ENST00000251775 GALNTL5Q7Z4T8 443 aa16.56■□□□□ 0.24
SNX4-201ENST00000251775 ADPRHL1Q8NDY3 354 aa16.56■□□□□ 0.24
SNX4-201ENST00000251775 TREM2Q9NZC2 230 aa16.56■□□□□ 0.24
SNX4-201ENST00000251775 LUZP4Q9P127 313 aa16.56■□□□□ 0.24
SNX4-201ENST00000251775 C14orf166Q9Y224 244 aaKnown RBP16.56■□□□□ 0.24
SNX4-201ENST00000251775 HDGFL3Q9Y3E1 203 aa16.56■□□□□ 0.24
SNX4-201ENST00000251775 C1QL1O75973 258 aa16.55■□□□□ 0.24
SNX4-201ENST00000251775 CELA2AP08217 269 aa16.55■□□□□ 0.24
SNX4-201ENST00000251775 LMO1P25800 156 aa16.55■□□□□ 0.24
SNX4-201ENST00000251775 CAMLGP49069 296 aa16.55■□□□□ 0.24
SNX4-201ENST00000251775 GGNBP1Q5YKI7 109 aa16.55■□□□□ 0.24
SNX4-201ENST00000251775 RPUSD3Q6P087 351 aaKnown RBP16.55■□□□□ 0.24
SNX4-201ENST00000251775 HEPN1Q6WQI6 88 aa16.55■□□□□ 0.24
SNX4-201ENST00000251775 MRPL24Q96A35 216 aaKnown RBP16.55■□□□□ 0.24
SNX4-201ENST00000251775 PFDN5Q99471 154 aa16.55■□□□□ 0.24
SNX4-201ENST00000251775 SLC35B3Q9H1N7 401 aa16.55■□□□□ 0.24
SNX4-201ENST00000251775 PRO3102Q9H379 93 aa16.55■□□□□ 0.24
SNX4-201ENST00000251775 WFDC1Q9HC57 220 aa16.55■□□□□ 0.24
SNX4-201ENST00000251775 C19orf12Q9NSK7 152 aa16.55■□□□□ 0.24
SNX4-201ENST00000251775 POLR1DQ9Y2S0 133 aa16.55■□□□□ 0.24
SNX4-201ENST00000251775 FBXO7Q9Y3I1 522 aa16.55■□□□□ 0.24
SNX4-201ENST00000251775 ZNF17P17021 662 aa16.55■□□□□ 0.24
SNX4-201ENST00000251775 SLC25A47Q6Q0C1 308 aa16.55■□□□□ 0.24
SNX4-201ENST00000251775 URM1Q9BTM9 101 aaKnown RBP16.55■□□□□ 0.24
SNX4-201ENST00000251775 OR10A2Q9H208 303 aa16.55■□□□□ 0.24
SNX4-201ENST00000251775 PLEKHA2Q9HB19 425 aa16.55■□□□□ 0.24
SNX4-201ENST00000251775 KCNJ16Q9NPI9 418 aa16.55■□□□□ 0.24
SNX4-201ENST00000251775 CHCHD2Q9Y6H1 151 aaPredicted RBP16.55■□□□□ 0.24
SNX4-201ENST00000251775 SLC34A2O95436 690 aa16.54■□□□□ 0.24
SNX4-201ENST00000251775 SCGB1D2O95969 90 aa16.54■□□□□ 0.24
SNX4-201ENST00000251775 HCKP08631 526 aa16.54■□□□□ 0.24
SNX4-201ENST00000251775 SLC2A1P11166 492 aa16.54■□□□□ 0.24
SNX4-201ENST00000251775 GPX4P36969 197 aaPredicted RBP16.54■□□□□ 0.24
SNX4-201ENST00000251775 RAB1AP62820 205 aa16.54■□□□□ 0.24
SNX4-201ENST00000251775 TMEM176BQ3YBM2 270 aaPredicted RBP16.54■□□□□ 0.24
SNX4-201ENST00000251775 COMMD2Q86X83 199 aa16.54■□□□□ 0.24
SNX4-201ENST00000251775 FAM89BQ8N5H3 189 aa16.54■□□□□ 0.24
SNX4-201ENST00000251775 TMEM156Q8N614 296 aa16.54■□□□□ 0.24
SNX4-201ENST00000251775 FADS6Q8N9I5 356 aa16.54■□□□□ 0.24
SNX4-201ENST00000251775 WDR87Q6ZQQ6 2873 aa16.54■□□□□ 0.24
SNX4-201ENST00000251775 ZNF878C9JN71 531 aa16.54■□□□□ 0.24
SNX4-201ENST00000251775 PCOLCEQ15113 449 aa16.54■□□□□ 0.24
SNX4-201ENST00000251775 CDPF1Q6NVV7 123 aa16.54■□□□□ 0.24
SNX4-201ENST00000251775 ABHD12BQ7Z5M8 362 aaPredicted RBP16.54■□□□□ 0.24
SNX4-201ENST00000251775 OR2AJ1Q8NGZ0 328 aa16.54■□□□□ 0.24
SNX4-201ENST00000251775 OR6X1Q8NH79 312 aa16.54■□□□□ 0.24
SNX4-201ENST00000251775 OXGR1Q96P68 337 aa16.54■□□□□ 0.24
SNX4-201ENST00000251775 GINS3Q9BRX5 216 aa16.54■□□□□ 0.24
SNX4-201ENST00000251775 ZNF319Q9P2F9 582 aa16.54■□□□□ 0.24
SNX4-201ENST00000251775 TMEM265A0A087WTH1 108 aa16.53■□□□□ 0.24
SNX4-201ENST00000251775 FOXI3A8MTJ6 420 aaPredicted RBP16.53■□□□□ 0.24
SNX4-201ENST00000251775 OR2C1O95371 312 aa16.53■□□□□ 0.24
SNX4-201ENST00000251775 HPNP05981 417 aa16.53■□□□□ 0.24
SNX4-201ENST00000251775 KLK3P07288 261 aaPredicted RBP16.53■□□□□ 0.24
SNX4-201ENST00000251775 OR13C7P0DN81 318 aa16.53■□□□□ 0.24
SNX4-201ENST00000251775 SLC35A1P78382 337 aa16.53■□□□□ 0.24
SNX4-201ENST00000251775 KIAA0141Q14154 515 aaPredicted RBP16.53■□□□□ 0.24
SNX4-201ENST00000251775 DMRTC1Q5HYR2 192 aa16.53■□□□□ 0.24
SNX4-201ENST00000251775 HIST2H3AQ71DI3 136 aa16.53■□□□□ 0.24
SNX4-201ENST00000251775 OR51T1Q8NGJ9 327 aa16.53■□□□□ 0.24
SNX4-201ENST00000251775 GPER1Q99527 375 aa16.53■□□□□ 0.24
SNX4-201ENST00000251775 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.53■□□□□ 0.24
SNX4-201ENST00000251775 NCOA6Q14686 2063 aaPredicted RBP16.53■□□□□ 0.24
SNX4-201ENST00000251775 IGKV1D-8A0A087WSZ0 117 aa16.53■□□□□ 0.24
SNX4-201ENST00000251775 RER1O15258 196 aa16.53■□□□□ 0.24
SNX4-201ENST00000251775 SUCLG1P53597 346 aaKnown RBP16.53■□□□□ 0.24
SNX4-201ENST00000251775 CHRFAM7AQ494W8 412 aa16.53■□□□□ 0.24
SNX4-201ENST00000251775 OR8B12Q8NGG6 310 aa16.53■□□□□ 0.24
SNX4-201ENST00000251775 SH3BGRL3Q9H299 93 aa16.53■□□□□ 0.24
SNX4-201ENST00000251775 GPR84Q9NQS5 396 aa16.53■□□□□ 0.24
SNX4-201ENST00000251775 PILRBQ9UKJ0 227 aa16.53■□□□□ 0.24
SNX4-201ENST00000251775 MED19A0JLT2 244 aaPredicted RBP16.52■□□□□ 0.24
SNX4-201ENST00000251775 QDPRP09417 244 aa16.52■□□□□ 0.24
SNX4-201ENST00000251775 ZNF43P17038 809 aa16.52■□□□□ 0.24
SNX4-201ENST00000251775 CDX1P47902 265 aaPredicted RBP16.52■□□□□ 0.24
SNX4-201ENST00000251775 SGPP2Q8IWX5 399 aa16.52■□□□□ 0.24
SNX4-201ENST00000251775 SSC4DQ8WTU2 575 aa16.52■□□□□ 0.24
SNX4-201ENST00000251775 FAM71F1Q96KD3 344 aaPredicted RBP16.52■□□□□ 0.24
SNX4-201ENST00000251775 CHST5Q9GZS9 411 aa16.52■□□□□ 0.24
SNX4-201ENST00000251775 PNRC2Q9NPJ4 139 aaKnown RBP16.52■□□□□ 0.24
SNX4-201ENST00000251775 IGKV1-9A0A0C4DH69 117 aa16.52■□□□□ 0.23
SNX4-201ENST00000251775 IFNA21P01568 189 aa16.52■□□□□ 0.23
SNX4-201ENST00000251775 MBPP02686 304 aaPredicted RBP16.52■□□□□ 0.23
SNX4-201ENST00000251775 P2RY1P47900 373 aa16.52■□□□□ 0.23
SNX4-201ENST00000251775 ZNF121P58317 390 aaPredicted RBP16.52■□□□□ 0.23
SNX4-201ENST00000251775 GABREP78334 506 aa16.52■□□□□ 0.23
SNX4-201ENST00000251775 CLINT1Q14677 625 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms