RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 RFPL4AL1F8VTS6 287 aa8.34□□□□□ -1.07
VPS50-201ENST00000251739 J3QT63 122 aa8.34□□□□□ -1.07
VPS50-201ENST00000251739 SYNGR1O43759 233 aa8.34□□□□□ -1.07
VPS50-201ENST00000251739 E2F6O75461 281 aa8.34□□□□□ -1.07
VPS50-201ENST00000251739 IGLV1-40P01703 118 aa8.34□□□□□ -1.07
VPS50-201ENST00000251739 ANXA8P13928 327 aa8.34□□□□□ -1.07
VPS50-201ENST00000251739 HOXB6P17509 224 aaKnown RBP8.34□□□□□ -1.07
VPS50-201ENST00000251739 RAB6AP20340 208 aa8.34□□□□□ -1.07
VPS50-201ENST00000251739 CALB2P22676 271 aa8.34□□□□□ -1.07
VPS50-201ENST00000251739 CEBPDP49716 269 aaPredicted RBP8.34□□□□□ -1.07
VPS50-201ENST00000251739 BMXP51813 675 aa8.34□□□□□ -1.07
VPS50-201ENST00000251739 GTF2A1P52655 376 aaPredicted RBP8.34□□□□□ -1.07
VPS50-201ENST00000251739 RIPPLY1Q0D2K3 151 aa8.34□□□□□ -1.07
VPS50-201ENST00000251739 ZNF273Q14593 569 aa8.34□□□□□ -1.07
VPS50-201ENST00000251739 FBLN7Q53RD9 439 aa8.34□□□□□ -1.07
VPS50-201ENST00000251739 LDLRAD2Q5SZI1 272 aa8.34□□□□□ -1.07
VPS50-201ENST00000251739 TMEM236Q5W0B7 351 aa8.34□□□□□ -1.07
VPS50-201ENST00000251739 PLCXD3Q63HM9 321 aa8.34□□□□□ -1.07
VPS50-201ENST00000251739 HIST2H2BDQ6DRA6 164 aa8.34□□□□□ -1.07
VPS50-201ENST00000251739 Q6ZPA2 131 aa8.34□□□□□ -1.07
VPS50-201ENST00000251739 CALHM1Q8IU99 346 aa8.34□□□□□ -1.07
VPS50-201ENST00000251739 EGFL6Q8IUX8 553 aa8.34□□□□□ -1.07
VPS50-201ENST00000251739 DYNAPQ8N1N2 210 aa8.34□□□□□ -1.07
VPS50-201ENST00000251739 ZNF561Q8N587 486 aa8.34□□□□□ -1.07
VPS50-201ENST00000251739 OR2T6Q8NHC8 308 aa8.34□□□□□ -1.07
VPS50-201ENST00000251739 PPP1R14AQ96A00 147 aa8.34□□□□□ -1.07
VPS50-201ENST00000251739 MROQ9BYG7 248 aa8.34□□□□□ -1.07
VPS50-201ENST00000251739 NPFFR1Q9GZQ6 430 aa8.34□□□□□ -1.07
VPS50-201ENST00000251739 C1orf21Q9H246 121 aa8.34□□□□□ -1.07
VPS50-201ENST00000251739 SERTAD4Q9NUC0 356 aa8.34□□□□□ -1.07
VPS50-201ENST00000251739 USE1Q9NZ43 259 aa8.34□□□□□ -1.07
VPS50-201ENST00000251739 ENPP5Q9UJA9 477 aa8.34□□□□□ -1.07
VPS50-201ENST00000251739 PIGLQ9Y2B2 252 aa8.34□□□□□ -1.07
VPS50-201ENST00000251739 KMT2CQ8NEZ4 4911 aaKnown RBP8.33□□□□□ -1.08
VPS50-201ENST00000251739 DHRS7CA6NNS2 312 aa8.33□□□□□ -1.08
VPS50-201ENST00000251739 C17orf98A8MV24 154 aa8.33□□□□□ -1.08
VPS50-201ENST00000251739 PSMD9O00233 223 aa8.33□□□□□ -1.08
VPS50-201ENST00000251739 SLC1A7O00341 560 aa8.33□□□□□ -1.08
VPS50-201ENST00000251739 ZNF737O75373 536 aa8.33□□□□□ -1.08
VPS50-201ENST00000251739 NRASP01111 189 aa8.33□□□□□ -1.08
VPS50-201ENST00000251739 RBP4P02753 201 aa8.33□□□□□ -1.08
VPS50-201ENST00000251739 MRPL3P09001 348 aaKnown RBP8.33□□□□□ -1.08
VPS50-201ENST00000251739 CCL3L1P16619 93 aa8.33□□□□□ -1.08
VPS50-201ENST00000251739 PRKACGP22612 351 aa8.33□□□□□ -1.08
VPS50-201ENST00000251739 PRDX2P32119 198 aa8.33□□□□□ -1.08
VPS50-201ENST00000251739 ERVFRD-1P60508 538 aa8.33□□□□□ -1.08
VPS50-201ENST00000251739 RPS7P62081 194 aaKnown RBP8.33□□□□□ -1.08
VPS50-201ENST00000251739 ZNF829Q3KNS6 432 aaPredicted RBP8.33□□□□□ -1.08
VPS50-201ENST00000251739 CLVS2Q5SYC1 327 aa8.33□□□□□ -1.08
VPS50-201ENST00000251739 ZNF684Q5T5D7 378 aa8.33□□□□□ -1.08
VPS50-201ENST00000251739 LCN1P1Q5VSP4 162 aa8.33□□□□□ -1.08
VPS50-201ENST00000251739 FAHD1Q6P587 224 aa8.33□□□□□ -1.08
VPS50-201ENST00000251739 CCBE1Q6UXH8 406 aaPredicted RBP8.33□□□□□ -1.08
VPS50-201ENST00000251739 MOB3CQ70IA8 216 aa8.33□□□□□ -1.08
VPS50-201ENST00000251739 LHFPL4Q7Z7J7 247 aa8.33□□□□□ -1.08
VPS50-201ENST00000251739 ZNF573Q86YE8 665 aa8.33□□□□□ -1.08
VPS50-201ENST00000251739 ELMOD2Q8IZ81 293 aa8.33□□□□□ -1.08
VPS50-201ENST00000251739 ASB17Q8WXJ9 295 aa8.33□□□□□ -1.08
VPS50-201ENST00000251739 LRGUKQ96M69 825 aa8.33□□□□□ -1.08
VPS50-201ENST00000251739 CDCA4Q9BXL8 241 aa8.33□□□□□ -1.08
VPS50-201ENST00000251739 HEXA-AS1Q9H8Q6 139 aa8.33□□□□□ -1.08
VPS50-201ENST00000251739 MOB1AQ9H8S9 216 aa8.33□□□□□ -1.08
VPS50-201ENST00000251739 DNAJB9Q9UBS3 223 aa8.33□□□□□ -1.08
VPS50-201ENST00000251739 TMEM14AQ9Y6G1 99 aa8.33□□□□□ -1.08
VPS50-201ENST00000251739 V9GYS6 101 aa8.33□□□□□ -1.08
VPS50-201ENST00000251739 A0A1W2PPH5 198 aa8.32□□□□□ -1.08
VPS50-201ENST00000251739 K7N7A8 449 aa8.32□□□□□ -1.08
VPS50-201ENST00000251739 DLGAP1O14490 977 aa8.32□□□□□ -1.08
VPS50-201ENST00000251739 PRKYO43930 277 aa8.32□□□□□ -1.08
VPS50-201ENST00000251739 TK1P04183 234 aa8.32□□□□□ -1.08
VPS50-201ENST00000251739 CCL1P22362 96 aa8.32□□□□□ -1.08
VPS50-201ENST00000251739 COX7A1P24310 79 aa8.32□□□□□ -1.08
VPS50-201ENST00000251739 HAAOP46952 286 aa8.32□□□□□ -1.08
VPS50-201ENST00000251739 RIDAP52758 137 aaKnown RBP8.32□□□□□ -1.08
VPS50-201ENST00000251739 CAPZA1P52907 286 aa8.32□□□□□ -1.08
VPS50-201ENST00000251739 CRISP1P54107 249 aa8.32□□□□□ -1.08
VPS50-201ENST00000251739 EFNB1P98172 346 aa8.32□□□□□ -1.08
VPS50-201ENST00000251739 ZNF626Q68DY1 528 aa8.32□□□□□ -1.08
VPS50-201ENST00000251739 ZNF322Q6U7Q0 402 aaPredicted RBP8.32□□□□□ -1.08
VPS50-201ENST00000251739 ZNF782Q6ZMW2 699 aaPredicted RBP8.32□□□□□ -1.08
VPS50-201ENST00000251739 TCF23Q7RTU1 214 aa8.32□□□□□ -1.08
VPS50-201ENST00000251739 COMMD2Q86X83 199 aa8.32□□□□□ -1.08
VPS50-201ENST00000251739 C11orf44Q8N8P7 122 aa8.32□□□□□ -1.08
VPS50-201ENST00000251739 OR14K1Q8NGZ2 314 aa8.32□□□□□ -1.08
VPS50-201ENST00000251739 DNAJC9Q8WXX5 260 aa8.32□□□□□ -1.08
VPS50-201ENST00000251739 FOXRED1Q96CU9 486 aaPredicted RBP8.32□□□□□ -1.08
VPS50-201ENST00000251739 CNN2Q99439 309 aaKnown RBP8.32□□□□□ -1.08
VPS50-201ENST00000251739 TTTY10Q9BZA0 68 aa8.32□□□□□ -1.08
VPS50-201ENST00000251739 PKIBQ9C010 78 aa8.32□□□□□ -1.08
VPS50-201ENST00000251739 WNT10AQ9GZT5 417 aa8.32□□□□□ -1.08
VPS50-201ENST00000251739 ZNF556Q9HAH1 456 aa8.32□□□□□ -1.08
VPS50-201ENST00000251739 TCF19Q9Y242 345 aa8.32□□□□□ -1.08
VPS50-201ENST00000251739 POLDIP2Q9Y2S7 368 aa8.32□□□□□ -1.08
VPS50-201ENST00000251739 TBL2Q9Y4P3 447 aaKnown RBP8.32□□□□□ -1.08
VPS50-201ENST00000251739 hCG_1809904A0A1W2PP81 198 aa8.31□□□□□ -1.08
VPS50-201ENST00000251739 A0A1W2PPE2 198 aa8.31□□□□□ -1.08
VPS50-201ENST00000251739 A0A1W2PR64 198 aa8.31□□□□□ -1.08
VPS50-201ENST00000251739 A0A1W2PRV1 198 aa8.31□□□□□ -1.08
VPS50-201ENST00000251739 TCRBV3S1A0A5B6 114 aa8.31□□□□□ -1.08
VPS50-201ENST00000251739 A6NDX4 124 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms